Alex E. Bocchieri

Haoran Wang, Weitang Liu, Alex Bocchieri et al.

Estimating out-of-distribution (OOD) uncertainty is a central challenge for safely deploying machine learning models in the open-world environment. Improved methods for OOD detection in multi-class classification have emerged, while OOD detection methods for multi-label classification remain underexplored and use rudimentary techniques. We propose JointEnergy, a simple and effective method, which estimates the OOD indicator scores by aggregating energy scores from multiple labels. We show that JointEnergy can be mathematically interpreted from a joint likelihood perspective. Our results show consistent improvement over previous methods that are based on the maximum-valued scores, which fail to capture joint information from multiple labels. We demonstrate the effectiveness of our method on three common multi-label classification benchmarks, including MS-COCO, PASCAL-VOC, and NUS-WIDE. We show that JointEnergy can reduce the FPR95 by up to 10.05% compared to the previous best baseline, establishing state-of-the-art performance.

Alex E. Bocchieri, Vishwa S. Parekh, Kathryn R. Wagner. Shivani Ahlawat et al.

A current clinical challenge is identifying limb girdle muscular dystrophy 2I(LGMD2I)tissue changes in the thighs, in particular, separating fat, fat-infiltrated muscle, and muscle tissue. Deep learning algorithms have the ability to learn different features by using the inherent tissue contrasts from multiparametric magnetic resonance imaging (mpMRI). To that end, we developed a novel multiparametric deep learning network (MPDL) tissue signature model based on mpMRI and applied it to LGMD2I. We demonstrate a new tissue signature model of muscular dystrophy with the MPDL algorithm segments different tissue types with excellent results.

Vishwa S. Parekh, John Laterra, Chetan Bettegowda et al.

Radiomics is an exciting new area of texture research for extracting quantitative and morphological characteristics of pathological tissue. However, to date, only single images have been used for texture analysis. We have extended radiomic texture methods to use multiparametric (mp) data to get more complete information from all the images. These mpRadiomic methods could potentially provide a platform for stratification of tumor grade as well as assessment of treatment response in brain tumors. In brain, multiparametric MRI (mpMRI) are based on contrast enhanced T1-weighted imaging (T1WI), T2WI, Fluid Attenuated Inversion Recovery (FLAIR), Diffusion Weighted Imaging (DWI) and Perfusion Weighted Imaging (PWI). Therefore, we applied our multiparametric radiomic framework (mpRadiomic) on 24 patients with brain tumors (8 grade II and 16 grade IV). The mpRadiomic framework classified grade IV tumors from grade II tumors with a sensitivity and specificity of 93% and 100%, respectively, with an AUC of 0.95. For treatment response, the mpRadiomic framework classified pseudo-progression from true-progression with an AUC of 0.93. In conclusion, the mpRadiomic analysis was able to effectively capture the multiparametric brain MRI texture and could be used as potential biomarkers for distinguishing grade IV from grade II tumors as well as determining true-progression from pseudo-progression.