Xian Wu

Zhengyi Zhao, Shubo Zhang, Huimin Wang et al.

Large Reasoning Models (LRMs) have demonstrated impressive capabilities in many tasks, yet they struggle with reliably following multiple instructions, either by failing to satisfy individual constraints or by struggling to balance competing constraints simultaneously. We formalize this challenge as the Constraint Adherence Problem (CAP). This paper introduces a novel framework that addresses CAP by representing instructions as a structured knowledge graph of constraints. Our approach, Constraint Relationship Graph Completion (CRGC), explicitly models relationships between constraints, identifies adherence challenges, and discovers ``bridge constraints'' that help the model better focus on and reconcile requirements. Bridge constraints act as auxiliary instructions that make primary constraints more salient and compatible. Unlike existing approaches that enhance instruction following through general training methods, CRGC specifically improves constraint satisfaction by leveraging the model's own knowledge to create better pathways for generation. Experiments across three popular instruction following datasets demonstrate that our approach reduces constraint violations by 39% compared to standard prompting while maintaining reasoning abilities of large reasoning models.

Peng Jin, Jinfa Huang, Fenglin Liu et al. · oxford

Most video-and-language representation learning approaches employ contrastive learning, e.g., CLIP, to project the video and text features into a common latent space according to the semantic similarities of text-video pairs. However, such learned shared latent spaces are not often optimal, and the modality gap between visual and textual representation can not be fully eliminated. In this paper, we propose Expectation-Maximization Contrastive Learning (EMCL) to learn compact video-and-language representations. Specifically, we use the Expectation-Maximization algorithm to find a compact set of bases for the latent space, where the features could be concisely represented as the linear combinations of these bases. Such feature decomposition of video-and-language representations reduces the rank of the latent space, resulting in increased representing power for the semantics. Extensive experiments on three benchmark text-video retrieval datasets prove that our EMCL can learn more discriminative video-and-language representations than previous methods, and significantly outperform previous state-of-the-art methods across all metrics. More encouragingly, the proposed method can be applied to boost the performance of existing approaches either as a jointly training layer or an out-of-the-box inference module with no extra training, making it easy to be incorporated into any existing methods.

Hongjian Zhou, Fenglin Liu, Boyang Gu et al.

Large language models (LLMs), such as ChatGPT, have received substantial attention due to their capabilities for understanding and generating human language. While there has been a burgeoning trend in research focusing on the employment of LLMs in supporting different medical tasks (e.g., enhancing clinical diagnostics and providing medical education), a review of these efforts, particularly their development, practical applications, and outcomes in medicine, remains scarce. Therefore, this review aims to provide a detailed overview of the development and deployment of LLMs in medicine, including the challenges and opportunities they face. In terms of development, we provide a detailed introduction to the principles of existing medical LLMs, including their basic model structures, number of parameters, and sources and scales of data used for model development. It serves as a guide for practitioners in developing medical LLMs tailored to their specific needs. In terms of deployment, we offer a comparison of the performance of different LLMs across various medical tasks, and further compare them with state-of-the-art lightweight models, aiming to provide an understanding of the advantages and limitations of LLMs in medicine. Overall, in this review, we address the following questions: 1) What are the practices for developing medical LLMs 2) How to measure the medical task performance of LLMs in a medical setting? 3) How have medical LLMs been employed in real-world practice? 4) What challenges arise from the use of medical LLMs? and 5) How to more effectively develop and deploy medical LLMs? By answering these questions, this review aims to provide insights into the opportunities for LLMs in medicine and serve as a practical resource. We also maintain a regularly updated list of practical guides on medical LLMs at https://github.com/AI-in-Health/MedLLMsPracticalGuide

Bang Yang, Fenglin Liu, Xian Wu et al.

Supervised visual captioning models typically require a large scale of images or videos paired with descriptions in a specific language (i.e., the vision-caption pairs) for training. However, collecting and labeling large-scale datasets is time-consuming and expensive for many scenarios and languages. Therefore, sufficient labeled pairs are usually not available. To deal with the label shortage problem, we present a simple yet effective zero-shot approach MultiCapCLIP that can generate visual captions for different scenarios and languages without any labeled vision-caption pairs of downstream datasets. In the training stage, MultiCapCLIP only requires text data for input. Then it conducts two main steps: 1) retrieving concept prompts that preserve the corresponding domain knowledge of new scenarios; 2) auto-encoding the prompts to learn writing styles to output captions in a desired language. In the testing stage, MultiCapCLIP instead takes visual data as input directly to retrieve the concept prompts to generate the final visual descriptions. The extensive experiments on image and video captioning across four benchmarks and four languages (i.e., English, Chinese, German, and French) confirm the effectiveness of our approach. Compared with state-of-the-art zero-shot and weakly-supervised methods, our method achieves 4.8% and 21.5% absolute improvements in terms of BLEU@4 and CIDEr metrics. Our code is available at https://github.com/yangbang18/MultiCapCLIP.

Jiageng Wu, Xian Wu, Yining Hua et al. · harvard

The COVID-19 pandemic has caused substantial damage to global health. Even though three years have passed, the world continues to struggle with the virus. Concerns are growing about the impact of COVID-19 on the mental health of infected individuals, who are more likely to experience depression, which can have long-lasting consequences for both the affected individuals and the world. Detection and intervention at an early stage can reduce the risk of depression in COVID-19 patients. In this paper, we investigated the relationship between COVID-19 infection and depression through social media analysis. Firstly, we managed a dataset of COVID-19 patients that contains information about their social media activity both before and after infection. Secondly,We conducted an extensive analysis of this dataset to investigate the characteristic of COVID-19 patients with a higher risk of depression. Thirdly, we proposed a deep neural network for early prediction of depression risk. This model considers daily mood swings as a psychiatric signal and incorporates textual and emotional characteristics via knowledge distillation. Experimental results demonstrate that our proposed framework outperforms baselines in detecting depression risk, with an AUROC of 0.9317 and an AUPRC of 0.8116. Our model has the potential to enable public health organizations to initiate prompt intervention with high-risk patients

Qidong Liu, Xian Wu, Xiangyu Zhao et al.

The recent surge in Large Language Models (LLMs) has garnered significant attention across numerous fields. Fine-tuning is often required to fit general LLMs for a specific domain, like the web-based healthcare system. However, two problems arise during fine-tuning LLMs for medical applications. One is the task variety problem, which involves distinct tasks in real-world medical scenarios. The variety often leads to sub-optimal fine-tuning for data imbalance and seesaw problems. Besides, the large amount of parameters in LLMs leads to huge time and computation consumption by fine-tuning. To address these two problems, we propose a novel parameter efficient fine-tuning framework for multi-task medical applications, dubbed as MOELoRA. The designed framework aims to absorb both the benefits of mixture-of-expert (MOE) for multi-task learning and low-rank adaptation (LoRA) for parameter efficient fine-tuning. For unifying MOE and LoRA, we devise multiple experts as the trainable parameters, where each expert consists of a pair of low-rank matrices to retain the small size of trainable parameters. Then, a task-motivated gate function for all MOELoRA layers is proposed, which can control the contributions of each expert and produce distinct parameters for various tasks. We conduct experiments on a multi-task medical dataset, indicating MOELoRA outperforms the existing parameter efficient fine-tuning methods. The code is available online.

Fenglin Liu, Xuancheng Ren, Xian Wu et al. · oxford

Recently, attention based models have been used extensively in many sequence-to-sequence learning systems. Especially for image captioning, the attention based models are expected to ground correct image regions with proper generated words. However, for each time step in the decoding process, the attention based models usually use the hidden state of the current input to attend to the image regions. Under this setting, these attention models have a "deviated focus" problem that they calculate the attention weights based on previous words instead of the one to be generated, impairing the performance of both grounding and captioning. In this paper, we propose the Prophet Attention, similar to the form of self-supervision. In the training stage, this module utilizes the future information to calculate the "ideal" attention weights towards image regions. These calculated "ideal" weights are further used to regularize the "deviated" attention. In this manner, image regions are grounded with the correct words. The proposed Prophet Attention can be easily incorporated into existing image captioning models to improve their performance of both grounding and captioning. The experiments on the Flickr30k Entities and the MSCOCO datasets show that the proposed Prophet Attention consistently outperforms baselines in both automatic metrics and human evaluations. It is worth noticing that we set new state-of-the-arts on the two benchmark datasets and achieve the 1st place on the leaderboard of the online MSCOCO benchmark in terms of the default ranking score, i.e., CIDEr-c40.

Ling Yue, Yongqi Zhang, Quanming Yao et al. · tencent-ai

Knowledge graph (KG) embedding is a fundamental task in natural language processing, and various methods have been proposed to explore semantic patterns in distinctive ways. In this paper, we propose to learn an ensemble by leveraging existing methods in a relation-aware manner. However, exploring these semantics using relation-aware ensemble leads to a much larger search space than general ensemble methods. To address this issue, we propose a divide-search-combine algorithm RelEns-DSC that searches the relation-wise ensemble weights independently. This algorithm has the same computation cost as general ensemble methods but with much better performance. Experimental results on benchmark datasets demonstrate the effectiveness of the proposed method in efficiently searching relation-aware ensemble weights and achieving state-of-the-art embedding performance. The code is public at https://github.com/LARS-research/RelEns.

Xian Wu, Shuxin Yang, Zhaopeng Qiu et al.

Fast screening and diagnosis are critical in COVID-19 patient treatment. In addition to the gold standard RT-PCR, radiological imaging like X-ray and CT also works as an important means in patient screening and follow-up. However, due to the excessive number of patients, writing reports becomes a heavy burden for radiologists. To reduce the workload of radiologists, we propose DeltaNet to generate medical reports automatically. Different from typical image captioning approaches that generate reports with an encoder and a decoder, DeltaNet applies a conditional generation process. In particular, given a medical image, DeltaNet employs three steps to generate a report: 1) first retrieving related medical reports, i.e., the historical reports from the same or similar patients; 2) then comparing retrieved images and current image to find the differences; 3) finally generating a new report to accommodate identified differences based on the conditional report. We evaluate DeltaNet on a COVID-19 dataset, where DeltaNet outperforms state-of-the-art approaches. Besides COVID-19, the proposed DeltaNet can be applied to other diseases as well. We validate its generalization capabilities on the public IU-Xray and MIMIC-CXR datasets for chest-related diseases. Code is available at \url{https://github.com/LX-doctorAI1/DeltaNet}.

Fenglin Liu, Shen Ge, Yuexian Zou et al. · oxford

Medical report generation task, which targets to produce long and coherent descriptions of medical images, has attracted growing research interests recently. Different from the general image captioning tasks, medical report generation is more challenging for data-driven neural models. This is mainly due to 1) the serious data bias and 2) the limited medical data. To alleviate the data bias and make best use of available data, we propose a Competence-based Multimodal Curriculum Learning framework (CMCL). Specifically, CMCL simulates the learning process of radiologists and optimizes the model in a step by step manner. Firstly, CMCL estimates the difficulty of each training instance and evaluates the competence of current model; Secondly, CMCL selects the most suitable batch of training instances considering current model competence. By iterating above two steps, CMCL can gradually improve the model's performance. The experiments on the public IU-Xray and MIMIC-CXR datasets show that CMCL can be incorporated into existing models to improve their performance.

Di You, Fenglin Liu, Shen Ge et al. · oxford

Recently, medical report generation, which aims to automatically generate a long and coherent descriptive paragraph of a given medical image, has received growing research interests. Different from the general image captioning tasks, medical report generation is more challenging for data-driven neural models. This is mainly due to 1) the serious data bias: the normal visual regions dominate the dataset over the abnormal visual regions, and 2) the very long sequence. To alleviate above two problems, we propose an AlignTransformer framework, which includes the Align Hierarchical Attention (AHA) and the Multi-Grained Transformer (MGT) modules: 1) AHA module first predicts the disease tags from the input image and then learns the multi-grained visual features by hierarchically aligning the visual regions and disease tags. The acquired disease-grounded visual features can better represent the abnormal regions of the input image, which could alleviate data bias problem; 2) MGT module effectively uses the multi-grained features and Transformer framework to generate the long medical report. The experiments on the public IU-Xray and MIMIC-CXR datasets show that the AlignTransformer can achieve results competitive with state-of-the-art methods on the two datasets. Moreover, the human evaluation conducted by professional radiologists further proves the effectiveness of our approach.

Chenyu You, Nuo Chen, Fenglin Liu et al. · oxford

In spoken question answering, the systems are designed to answer questions from contiguous text spans within the related speech transcripts. However, the most natural way that human seek or test their knowledge is via human conversations. Therefore, we propose a new Spoken Conversational Question Answering task (SCQA), aiming at enabling the systems to model complex dialogue flows given the speech documents. In this task, our main objective is to build the system to deal with conversational questions based on the audio recordings, and to explore the plausibility of providing more cues from different modalities with systems in information gathering. To this end, instead of directly adopting automatically generated speech transcripts with highly noisy data, we propose a novel unified data distillation approach, DDNet, which effectively ingests cross-modal information to achieve fine-grained representations of the speech and language modalities. Moreover, we propose a simple and novel mechanism, termed Dual Attention, by encouraging better alignments between audio and text to ease the process of knowledge transfer. To evaluate the capacity of SCQA systems in a dialogue-style interaction, we assemble a Spoken Conversational Question Answering (Spoken-CoQA) dataset with more than 40k question-answer pairs from 4k conversations. The performance of the existing state-of-the-art methods significantly degrade on our dataset, hence demonstrating the necessity of cross-modal information integration. Our experimental results demonstrate that our proposed method achieves superior performance in spoken conversational question answering tasks.

Qidong Liu, Xian Wu, Wanyu Wang et al.

Sequential Recommender Systems (SRS), which model a user's interaction history to predict the next item of interest, are widely used in various applications. However, existing SRS often struggle with low-popularity items, a challenge known as the long-tail problem. This issue leads to reduced serendipity for users and diminished profits for sellers, ultimately harming the overall system. Large Language Model (LLM) has the ability to capture semantic relationships between items, independent of their popularity, making it a promising solution to this problem. In this paper, we introduce LLMEmb, a novel method leveraging LLM to generate item embeddings that enhance SRS performance. To bridge the gap between general-purpose LLM and the recommendation domain, we propose a Supervised Contrastive Fine-Tuning (SCFT) approach. This approach includes attribute-level data augmentation and a tailored contrastive loss to make LLM more recommendation-friendly. Additionally, we emphasize the importance of integrating collaborative signals into LLM-generated embeddings, for which we propose Recommendation Adaptation Training (RAT). This further refines the embeddings for optimal use in SRS. The LLMEmb-derived embeddings can be seamlessly integrated with any SRS models, underscoring the practical value. Comprehensive experiments conducted on three real-world datasets demonstrate that LLMEmb significantly outperforms existing methods across multiple SRS models. The code for our method is released online https://github.com/Applied-Machine-Learning-Lab/LLMEmb.

Bang Yang, Fenglin Liu, Yuexian Zou et al. · oxford

Natural Language Generation (NLG) accepts input data in the form of images, videos, or text and generates corresponding natural language text as output. Existing NLG methods mainly adopt a supervised approach and rely heavily on coupled data-to-text pairs. However, for many targeted scenarios and for non-English languages, sufficient quantities of labeled data are often not available. To relax the dependency on labeled data of downstream tasks, we propose an intuitive and effective zero-shot learning framework, ZeroNLG, which can deal with multiple NLG tasks, including image-to-text (image captioning), video-to-text (video captioning), and text-to-text (neural machine translation), across English, Chinese, German, and French within a unified framework. ZeroNLG does not require any labeled downstream pairs for training. During training, ZeroNLG (i) projects different domains (across modalities and languages) to corresponding coordinates in a shared common latent space; (ii) bridges different domains by aligning their corresponding coordinates in this space; and (iii) builds an unsupervised multilingual auto-encoder to learn to generate text by reconstructing the input text given its coordinate in shared latent space. Consequently, during inference, based on the data-to-text pipeline, ZeroNLG can generate target sentences across different languages given the coordinate of input data in the common space. Within this unified framework, given visual (imaging or video) data as input, ZeroNLG can perform zero-shot visual captioning; given textual sentences as input, ZeroNLG can perform zero-shot machine translation. We present the results of extensive experiments on twelve NLG tasks, showing that, without using any labeled downstream pairs for training, ZeroNLG generates high-quality and believable outputs and significantly outperforms existing zero-shot methods.

Fenglin Liu, Xian Wu, Chenyu You et al. · oxford

Training supervised video captioning model requires coupled video-caption pairs. However, for many targeted languages, sufficient paired data are not available. To this end, we introduce the unpaired video captioning task aiming to train models without coupled video-caption pairs in target language. To solve the task, a natural choice is to employ a two-step pipeline system: first utilizing video-to-pivot captioning model to generate captions in pivot language and then utilizing pivot-to-target translation model to translate the pivot captions to the target language. However, in such a pipeline system, 1) visual information cannot reach the translation model, generating visual irrelevant target captions; 2) the errors in the generated pivot captions will be propagated to the translation model, resulting in disfluent target captions. To address these problems, we propose the Unpaired Video Captioning with Visual Injection system (UVC-VI). UVC-VI first introduces the Visual Injection Module (VIM), which aligns source visual and target language domains to inject the source visual information into the target language domain. Meanwhile, VIM directly connects the encoder of the video-to-pivot model and the decoder of the pivot-to-target model, allowing end-to-end inference by completely skipping the generation of pivot captions. To enhance the cross-modality injection of the VIM, UVC-VI further introduces a pluggable video encoder, i.e., Multimodal Collaborative Encoder (MCE). The experiments show that UVC-VI outperforms pipeline systems and exceeds several supervised systems. Furthermore, equipping existing supervised systems with our MCE can achieve 4% and 7% relative margins on the CIDEr scores to current state-of-the-art models on the benchmark MSVD and MSR-VTT datasets, respectively.

Zhenxi Lin, Ziheng Zhang, Meng Wang et al. · tencent-ai

Multi-modal entity alignment aims to identify equivalent entities between two different multi-modal knowledge graphs, which consist of structural triples and images associated with entities. Most previous works focus on how to utilize and encode information from different modalities, while it is not trivial to leverage multi-modal knowledge in entity alignment because of the modality heterogeneity. In this paper, we propose MCLEA, a Multi-modal Contrastive Learning based Entity Alignment model, to obtain effective joint representations for multi-modal entity alignment. Different from previous works, MCLEA considers task-oriented modality and models the inter-modal relationships for each entity representation. In particular, MCLEA firstly learns multiple individual representations from multiple modalities, and then performs contrastive learning to jointly model intra-modal and inter-modal interactions. Extensive experimental results show that MCLEA outperforms state-of-the-art baselines on public datasets under both supervised and unsupervised settings.

Yongqi Zhang, Quanming Yao, Ling Yue et al. · tencent-ai

Accurately predicting drug-drug interactions (DDI) for emerging drugs, which offer possibilities for treating and alleviating diseases, with computational methods can improve patient care and contribute to efficient drug development. However, many existing computational methods require large amounts of known DDI information, which is scarce for emerging drugs. In this paper, we propose EmerGNN, a graph neural network (GNN) that can effectively predict interactions for emerging drugs by leveraging the rich information in biomedical networks. EmerGNN learns pairwise representations of drugs by extracting the paths between drug pairs, propagating information from one drug to the other, and incorporating the relevant biomedical concepts on the paths. The different edges on the biomedical network are weighted to indicate the relevance for the target DDI prediction. Overall, EmerGNN has higher accuracy than existing approaches in predicting interactions for emerging drugs and can identify the most relevant information on the biomedical network.

Fenglin Liu, Bang Yang, Chenyu You et al. · oxford

Language models (LMs), including large language models (such as ChatGPT), have the potential to assist clinicians in generating various clinical notes. However, LMs are prone to produce ``hallucinations'', i.e., generated content that is not aligned with facts and knowledge. In this paper, we propose the Re$^3$Writer method with retrieval-augmented generation and knowledge-grounded reasoning to enable LMs to generate faithful clinical texts. We demonstrate the effectiveness of our method in generating patient discharge instructions. It requires the LMs not to only understand the patients' long clinical documents, i.e., the health records during hospitalization, but also to generate critical instructional information provided both to carers and to the patient at the time of discharge. The proposed Re$^3$Writer imitates the working patterns of physicians to first \textbf{re}trieve related working experience from historical instructions written by physicians, then \textbf{re}ason related medical knowledge. Finally, it \textbf{re}fines the retrieved working experience and reasoned medical knowledge to extract useful information, which is used to generate the discharge instructions for previously-unseen patients. Our experiments show that, using our method, the performance of five representative LMs can be substantially boosted across all metrics. Meanwhile, we show results from human evaluations to measure the effectiveness in terms of fluency, faithfulness, and comprehensiveness.

Fenglin Liu, Bang Yang, Chenyu You et al. · oxford

Gene Ontology (GO) is the primary gene function knowledge base that enables computational tasks in biomedicine. The basic element of GO is a term, which includes a set of genes with the same function. Existing research efforts of GO mainly focus on predicting gene term associations. Other tasks, such as generating descriptions of new terms, are rarely pursued. In this paper, we propose a novel task: GO term description generation. This task aims to automatically generate a sentence that describes the function of a GO term belonging to one of the three categories, i.e., molecular function, biological process, and cellular component. To address this task, we propose a Graph-in-Graph network that can efficiently leverage the structural information of GO. The proposed network introduces a two-layer graph: the first layer is a graph of GO terms where each node is also a graph (gene graph). Such a Graph-in-Graph network can derive the biological functions of GO terms and generate proper descriptions. To validate the effectiveness of the proposed network, we build three large-scale benchmark datasets. By incorporating the proposed Graph-in-Graph network, the performances of seven different sequence-to-sequence models can be substantially boosted across all evaluation metrics, with up to 34.7%, 14.5%, and 39.1% relative improvements in BLEU, ROUGE-L, and METEOR, respectively.

Fenglin Liu, Xian Wu, Shen Ge et al. · oxford

Vision-and-language (V-L) tasks require the system to understand both vision content and natural language, thus learning fine-grained joint representations of vision and language (a.k.a. V-L representations) is of paramount importance. Recently, various pre-trained V-L models are proposed to learn V-L representations and achieve improved results in many tasks. However, the mainstream models process both vision and language inputs with the same set of attention matrices. As a result, the generated V-L representations are entangled in one common latent space. To tackle this problem, we propose DiMBERT (short for Disentangled Multimodal-Attention BERT), which is a novel framework that applies separated attention spaces for vision and language, and the representations of multi-modalities can thus be disentangled explicitly. To enhance the correlation between vision and language in disentangled spaces, we introduce the visual concepts to DiMBERT which represent visual information in textual format. In this manner, visual concepts help to bridge the gap between the two modalities. We pre-train DiMBERT on a large amount of image-sentence pairs on two tasks: bidirectional language modeling and sequence-to-sequence language modeling. After pre-train, DiMBERT is further fine-tuned for the downstream tasks. Experiments show that DiMBERT sets new state-of-the-art performance on three tasks (over four datasets), including both generation tasks (image captioning and visual storytelling) and classification tasks (referring expressions). The proposed DiM (short for Disentangled Multimodal-Attention) module can be easily incorporated into existing pre-trained V-L models to boost their performance, up to a 5% increase on the representative task. Finally, we conduct a systematic analysis and demonstrate the effectiveness of our DiM and the introduced visual concepts.

Chunze Yang, Qidong Liu, Wenjie Zhao et al.

Whole-slide image visual question answering (WSI-VQA) frames pathology as an extreme-context search problem: to answer a free-form clinical query, a system must first navigate a gigapixel slide under a strict inspection budget to locate sparse, high-resolution evidence. Existing approaches largely fall into two paradigms: i) supervised pathology multimodal large language models (MLLMs) and agents can absorb localization and reasoning into learned modules, but they often couple navigation to task-specific supervision and retraining, limiting their practicality; ii) training-free pathology agents avoid this cost by keeping core models frozen, but often follow a question-first design, constructing the initial candidate set mainly from query-conditioned relevance. This can miss decisive morphology that is not named in the question, and force heavier inference-time scaffolding. To address this challenge, we introduce PathNavigate, a training-free pathology agent built around a scan-search-readout routine. Before question matching, PathNavigate scans the current slide at low magnification with a shared online memory module over frozen pathology features, producing a slide-specific surprise field that marks an abnormal-region pool. It then applies question-conditioned PLIP relevance only within this pool to select high-magnification search targets. Finally, it extracts local high-magnification evidence and answers with a frozen perceptor-adjudicator stack, using the same online memory as slide-level context. Experiments on WSI-VQA and SlideBench-BCNB show that the proposed scan-search-readout design improves answer accuracy and yields more interpretable evidence-selection trajectories with higher efficiency.The code is available online.

Yunfan Hu, Zhaopeng Qiu, Xian Wu

News recommendation is different from movie or e-commercial recommendation as people usually do not grade the news. Therefore, user feedback for news is always implicit (click behavior, reading time, etc). Inevitably, there are noises in implicit feedback. On one hand, the user may exit immediately after clicking the news as he dislikes the news content, leaving the noise in his positive implicit feedback; on the other hand, the user may be recommended multiple interesting news at the same time and only click one of them, producing the noise in his negative implicit feedback. Opposite implicit feedback could construct more integrated user preferences and help each other to minimize the noise influence. Previous works on news recommendation only used positive implicit feedback and suffered from the noise impact. In this paper, we propose a denoising neural network for news recommendation with positive and negative implicit feedback, named DRPN. DRPN utilizes both feedback for recommendation with a module to denoise both positive and negative implicit feedback to further enhance the performance. Experiments on the real-world large-scale dataset demonstrate the state-of-the-art performance of DRPN.

Xian Wu, Chen Wang, Hongbo Fu et al.

Researchers have explored various ways to generate realistic images from freehand sketches, e.g., for objects and human faces. However, how to generate realistic human body images from sketches is still a challenging problem. It is, first because of the sensitivity to human shapes, second because of the complexity of human images caused by body shape and pose changes, and third because of the domain gap between realistic images and freehand sketches. In this work, we present DeepPortraitDrawing, a deep generative framework for converting roughly drawn sketches to realistic human body images. To encode complicated body shapes under various poses, we take a local-to-global approach. Locally, we employ semantic part auto-encoders to construct part-level shape spaces, which are useful for refining the geometry of an input pre-segmented hand-drawn sketch. Globally, we employ a cascaded spatial transformer network to refine the structure of body parts by adjusting their spatial locations and relative proportions. Finally, we use a global synthesis network for the sketch-to-image translation task, and a face refinement network to enhance facial details. Extensive experiments have shown that given roughly sketched human portraits, our method produces more realistic images than the state-of-the-art sketch-to-image synthesis techniques.

Yejing Wang, Xiangyu Zhao, Tong Xu et al.

Feature quality has an impactful effect on recommendation performance. Thereby, feature selection is a critical process in developing deep learning-based recommender systems. Most existing deep recommender systems, however, focus on designing sophisticated neural networks, while neglecting the feature selection process. Typically, they just feed all possible features into their proposed deep architectures, or select important features manually by human experts. The former leads to non-trivial embedding parameters and extra inference time, while the latter requires plenty of expert knowledge and human labor effort. In this work, we propose an AutoML framework that can adaptively select the essential feature fields in an automatic manner. Specifically, we first design a differentiable controller network, which is capable of automatically adjusting the probability of selecting a particular feature field; then, only selected feature fields are utilized to retrain the deep recommendation model. Extensive experiments on three benchmark datasets demonstrate the effectiveness of our framework. We conduct further experiments to investigate its properties, including the transferability, key components, and parameter sensitivity.

Jiarui Jin, Haoyu Wang, Xingliang Wu et al.

Electrocardiography (ECG) serves as an indispensable diagnostic tool in clinical practice, yet existing multimodal large language models (MLLMs) remain unreliable for ECG interpretation, often producing plausible but clinically incorrect analyses. To address this, we propose ECG-R1, the first reasoning MLLM designed for reliable ECG interpretation via three innovations. First, we construct the interpretation corpus using \textit{Protocol-Guided Instruction Data Generation}, grounding interpretation in measurable ECG features and monograph-defined quantitative thresholds and diagnostic logic. Second, we present a modality-decoupled architecture with \textit{Interleaved Modality Dropout} to improve robustness and cross-modal consistency when either the ECG signal or ECG image is missing. Third, we present \textit{Reinforcement Learning with ECG Diagnostic Evidence Rewards} to strengthen evidence-grounded ECG interpretation. Additionally, we systematically evaluate the ECG interpretation capabilities of proprietary, open-source, and medical MLLMs, and provide the first quantitative evidence that severe hallucinations are widespread, suggesting that the public should not directly trust these outputs without independent verification. Code and data are publicly available at \href{https://github.com/PKUDigitalHealth/ECG-R1}{here}, and an online platform can be accessed at \href{http://ai.heartvoice.com.cn/ECG-R1/}{here}.

Xian Wu, Kaijie Zhu, Ying Zhang et al.

Process rewards have been widely used in deep reinforcement learning to improve training efficiency, reduce variance, and prevent reward hacking. In LLM reasoning, existing works also explore various solutions for learning effective process reward models (PRM) with or without the help of an expert policy. However, existing methods either rely on strong assumptions about the expert policies (e.g., requiring their reward functions) or suffer intrinsic limitations (e.g., entropy collapse), resulting in weak PRMs or limited generalizability. In this paper, we introduce rePIRL, an inverse RL-inspired framework that learns effective PRMs with minimal assumptions about expert policies. Specifically, we design a dual learning process that updates the policy and the PRM interchangeably. Our learning algorithm has customized techniques to address the challenges of scaling traditional inverse RL to LLMs. We theoretically show that our proposed learning framework can unify both online and offline PRM learning methods, justifying that rePIRL can learn PRMs with minimal assumptions. Empirical evaluations on standardized math and coding reasoning datasets demonstrate the effectiveness of rePIRL over existing methods. We further show the application of our trained PRM in test-time training, test-time scaling, and providing an early signal for training hard problems. Finally, we validate our training recipe and key design choices via a detailed ablation study.

Derong Xu, Wei Chen, Wenjun Peng et al.

Information extraction (IE) aims to extract structural knowledge from plain natural language texts. Recently, generative Large Language Models (LLMs) have demonstrated remarkable capabilities in text understanding and generation. As a result, numerous works have been proposed to integrate LLMs for IE tasks based on a generative paradigm. To conduct a comprehensive systematic review and exploration of LLM efforts for IE tasks, in this study, we survey the most recent advancements in this field. We first present an extensive overview by categorizing these works in terms of various IE subtasks and techniques, and then we empirically analyze the most advanced methods and discover the emerging trend of IE tasks with LLMs. Based on a thorough review conducted, we identify several insights in technique and promising research directions that deserve further exploration in future studies. We maintain a public repository and consistently update related works and resources on GitHub (\href{https://github.com/quqxui/Awesome-LLM4IE-Papers}{LLM4IE repository})

Xian Wu, Haoran Li, Dongbin Zhao et al.

Reinforcement learning offers a promising approach for scan-order optimisation in laser additive manufacturing, where sequential scan decisions critically influence thermal accumulation, residual stress, distortion, and final part quality. A central challenge in applying RL to this domain lies in reward and world-model fidelity: full finite-element analysis is computationally prohibitive for dense in-the-loop evaluation, while cheap thermo-inspired proxy metrics, though efficient, may capture only partial aspects of the true thermo-mechanical objectives. This paper investigates a bilevel Proxy--FEA diagnostic framework for reward and world-model diagnosis in reinforcement-learning-guided scan-order optimisation. The lower level employs lightweight scan-path and thermo-inspired proxies for rapid candidate generation and preliminary policy-side screening, while the upper level utilises sparse Abaqus FEA simulations to provide simulation-based reference labels. The framework is examined on a simplified whole-track heating LDED32 stripe benchmark comprising ten representative scan strategies. Final-cooling residual Mises stress, U3 vertical distortion, and PEEQ plasticity metrics reveal an observed stress--distortion trade-off rather than a single monotonic quality objective. Within the evaluated set, the center_out strategy emerges as a robust compromise candidate, while raster_left_to_right and edge_in form opposing endpoints of the trade-off. Proxy--FEA alignment analysis shows that current cheap path-based metrics predominantly capture distortion-related (U3) behaviour and exhibit only weak correlation with the sparse FEA reference labels. These findings highlight that proxy-only reward designs risk misalignment in future RL training and underscore the value of sparse FEA reference signals for diagnostic-guided reward and world-model refinement prior to large-scale policy optimisation.

Junyu Luo, Weizhi Zhang, Ye Yuan et al. · pku

The era of intelligent agents is upon us, driven by revolutionary advancements in large language models. Large Language Model (LLM) agents, with goal-driven behaviors and dynamic adaptation capabilities, potentially represent a critical pathway toward artificial general intelligence. This survey systematically deconstructs LLM agent systems through a methodology-centered taxonomy, linking architectural foundations, collaboration mechanisms, and evolutionary pathways. We unify fragmented research threads by revealing fundamental connections between agent design principles and their emergent behaviors in complex environments. Our work provides a unified architectural perspective, examining how agents are constructed, how they collaborate, and how they evolve over time, while also addressing evaluation methodologies, tool applications, practical challenges, and diverse application domains. By surveying the latest developments in this rapidly evolving field, we offer researchers a structured taxonomy for understanding LLM agents and identify promising directions for future research. The collection is available at https://github.com/luo-junyu/Awesome-Agent-Papers.

Zichuan Fu, Wentao Song, Guojing Li et al.

The Transformer architecture, a cornerstone of modern Large Language Models (LLMs), has achieved extraordinary success in sequence modeling, primarily due to its attention mechanism. However, despite its power, the standard attention mechanism is plagued by well-documented issues: representational collapse and attention sink. Although prior work has proposed approaches for these issues, they are often studied in isolation, obscuring their deeper connection. In this paper, we present a unified perspective, arguing that both can be traced to a common root -- improper attention allocation. We identify two failure modes: 1) Attention Overload, where tokens receive comparable high weights, blurring semantic features that lead to representational collapse; 2) Attention Underload, where no token is semantically relevant, yet attention is still forced to distribute, resulting in spurious focus such as attention sink. Building on this insight, we introduce Lazy Attention, a novel mechanism designed for a more focused attention distribution. To mitigate overload, it employs positional discrimination across both heads and dimensions to sharpen token distinctions. To counteract underload, it incorporates Elastic-Softmax, a modified normalization function that relaxes the standard softmax constraint to suppress attention on irrelevant tokens. Experiments on the FineWeb-Edu corpus, evaluated across nine diverse benchmarks, demonstrate that Lazy Attention successfully mitigates attention sink and achieves competitive performance compared to both standard attention and modern architectures, while reaching up to 59.58% attention sparsity.

Yuxuan Zhang, Yubo Wang, Yipeng Zhu et al.

AI agents may be able to automate your inbox, but can they automate other routine aspects of your life? Everyday online tasks offer a realistic yet unsolved testbed for evaluating the next generation of AI agents. To this end, we introduce ClawBench, an evaluation framework of 153 simple tasks that people need to accomplish regularly in their lives and work, spanning 144 live platforms across 15 categories, from completing purchases and booking appointments to submitting job applications. These tasks require demanding capabilities beyond existing benchmarks, such as obtaining relevant information from user-provided documents, navigating multi-step workflows across diverse platforms, and write-heavy operations like filling in many detailed forms correctly. Unlike existing benchmarks that evaluate agents in offline sandboxes with static pages, ClawBench operates on production websites, preserving the full complexity, dynamic nature, and challenges of real-world web interaction. A lightweight interception layer captures and blocks only the final submission request, ensuring safe evaluation without real-world side effects. Our evaluations of 7 frontier models show that both proprietary and open-source models can complete only a small portion of these tasks. For example, Claude Sonnet 4.6 achieves only 33.3%. Progress on ClawBench brings us closer to AI agents that can function as reliable general-purpose assistants.

Sunan He, Yuxiang Nie, Hongmei Wang et al.

Generalist foundation models (GFMs) are renowned for their exceptional capability and flexibility in effectively generalizing across diverse tasks and modalities. In the field of medicine, while GFMs exhibit superior generalizability based on their extensive intrinsic knowledge as well as proficiency in instruction following and in-context learning, specialist models excel in precision due to their domain knowledge. In this work, for the first time, we explore the synergy between the GFM and specialist models, to enable precise medical image analysis on a broader scope. Specifically, we propose a cooperative framework, Generalist-Specialist Collaboration (GSCo), which consists of two stages, namely the construction of GFM and specialists, and collaborative inference on downstream tasks. In the construction stage, we develop MedDr, the largest open-source GFM tailored for medicine, showcasing exceptional instruction-following and in-context learning capabilities. Meanwhile, a series of lightweight specialists are crafted for downstream tasks with low computational cost. In the collaborative inference stage, we introduce two cooperative mechanisms, Mixture-of-Expert Diagnosis and Retrieval-Augmented Diagnosis, to harvest the generalist's in-context learning abilities alongside the specialists' domain expertise. For a comprehensive evaluation, we curate a large-scale benchmark featuring 28 datasets and about 250,000 images. Extensive results demonstrate that MedDr consistently outperforms state-of-the-art GFMs on downstream datasets. Furthermore, GSCo exceeds both GFMs and specialists across all out-of-domain disease diagnosis datasets. These findings indicate a significant paradigm shift in the application of GFMs, transitioning from separate models for specific tasks to a collaborative approach between GFMs and specialists, thereby advancing the frontiers of generalizable AI in medicine.

Zichuan Fu, Xian Wu, Guojing Li et al.

Recent advancements in large language models (LLMs) have catalyzed the rise of reasoning-intensive inference paradigms, where models perform explicit step-by-step reasoning before generating final answers. While such approaches improve answer quality and interpretability, they incur substantial computational overhead due to the prolonged generation sequences. In this paper, we propose Tandem, a novel collaborative framework that synergizes large and small language models (LLMs and SLMs) to achieve high-quality reasoning with significantly reduced computational cost. Specifically, the LLM serves as a strategic coordinator, efficiently generating a compact set of critical reasoning insights. These insights are then used to guide a smaller, more efficient SLM in executing the full reasoning process and delivering the final response. To balance efficiency and reliability, Tandem introduces a cost-aware termination mechanism that adaptively determines when sufficient reasoning guidance has been accumulated, enabling early stopping of the LLM's generation. Experiments on mathematical reasoning and code generation benchmarks demonstrate that Tandem reduces computational costs by approximately 40% compared to standalone LLM reasoning, while achieving superior or competitive performance. Furthermore, the sufficiency classifier trained on one domain transfers effectively to others without retraining. The code is available at: https://github.com/Applied-Machine-Learning-Lab/ACL2026_Tandem.

Peng Xia, Jinglu Wang, Yibo Peng et al.

Medical Large Vision-Language Models (Med-LVLMs) have shown strong potential in multimodal diagnostic tasks. However, existing single-agent models struggle to generalize across diverse medical specialties, limiting their performance. Recent efforts introduce multi-agent collaboration frameworks inspired by clinical workflows, where general practitioners (GPs) and specialists interact in a fixed sequence. Despite improvements, these static pipelines lack flexibility and adaptability in reasoning. To address this, we propose MMedAgent-RL, a reinforcement learning (RL)-based multi-agent framework that enables dynamic, optimized collaboration among medical agents. Specifically, we train two GP agents based on Qwen2.5-VL via RL: the triage doctor learns to assign patients to appropriate specialties, while the attending physician integrates the judgments from multi-specialists and its own knowledge to make final decisions. To address the inconsistency in specialist outputs, we introduce a curriculum learning (CL)-guided RL strategy that progressively teaches the attending physician to balance between imitating specialists and correcting their mistakes. Experiments on five medical VQA benchmarks demonstrate that MMedAgent-RL not only outperforms both open-source and proprietary Med-LVLMs, but also exhibits human-like reasoning patterns. Notably, it achieves an average performance gain of 20.7% over supervised fine-tuning baselines.

Xiaoyu Li, Dedong Liu, Yitao Wu et al.

3D Multi-Object Tracking (MOT) captures stable and comprehensive motion states of surrounding obstacles, essential for robotic perception. However, current 3D trackers face issues with accuracy and latency consistency. In this paper, we propose Fast-Poly, a fast and effective filter-based method for 3D MOT. Building upon our previous work Poly-MOT, Fast-Poly addresses object rotational anisotropy in 3D space, enhances local computation densification, and leverages parallelization technique, improving inference speed and precision. Fast-Poly is extensively tested on two large-scale tracking benchmarks with Python implementation. On the nuScenes dataset, Fast-Poly achieves new state-of-the-art performance with 75.8% AMOTA among all methods and can run at 34.2 FPS on a personal CPU. On the Waymo dataset, Fast-Poly exhibits competitive accuracy with 63.6% MOTA and impressive inference speed (35.5 FPS). The source code is publicly available at https://github.com/lixiaoyu2000/FastPoly.

Xinquan Yang, Jinheng Xie, Yawen Huang et al.

Long-tailed pulmonary anomalies in chest radiography present formidable diagnostic challenges. Despite the recent strides in diffusion-based methods for enhancing the representation of tailed lesions, the paucity of rare lesion exemplars curtails the generative capabilities of these approaches, thereby leaving the diagnostic precision less than optimal. In this paper, we propose a novel data synthesis pipeline designed to augment tail lesions utilizing a copious supply of conventional normal X-rays. Specifically, a sufficient quantity of normal samples is amassed to train a diffusion model capable of generating normal X-ray images. This pre-trained diffusion model is subsequently utilized to inpaint the head lesions present in the diseased X-rays, thereby preserving the tail classes as augmented training data. Additionally, we propose the integration of a Large Language Model Knowledge Guidance (LKG) module alongside a Progressive Incremental Learning (PIL) strategy to stabilize the inpainting fine-tuning process. Comprehensive evaluations conducted on the public lung datasets MIMIC and CheXpert demonstrate that the proposed method sets a new benchmark in performance.

Zichuan Fu, Wentao Song, Yejing Wang et al.

Recent advances in transformer-based Large Language Models (LLMs) have demonstrated remarkable capabilities across various tasks. However, their quadratic computational complexity concerning sequence length remains a significant bottleneck for processing long documents. As a result, many efforts like sparse attention and state space models have been proposed to improve the efficiency of LLMs over long sequences. Though effective, these approaches compromise the performance or introduce structural complexity. This calls for a simple yet efficient model that preserves the fundamental Transformer architecture. To this end, we introduce SWAT, which enables efficient long-context handling via Sliding Window Attention Training. This paper first attributes the inefficiency of Transformers to the attention sink phenomenon resulting from the high variance of softmax operation. Then, we replace softmax with the sigmoid function and utilize a balanced ALiBi and Rotary Position Embedding for efficient information compression and retention. Experiments demonstrate that SWAT achieves SOTA performance compared with state-of-the-art linear recurrent architectures on eight benchmarks. Code is available at https://github.com/Fzkuji/swat-attention.

Hao Wu, Yongheng Zhang, Yuan Gao et al.

Large Language Models (LLMs) have demonstrated exceptional logical reasoning capabilities but frequently struggle with the continuous spatiotemporal dynamics governed by Partial Differential Equations (PDEs), often resulting in non-physical hallucinations. Existing approaches typically resort to costly, domain-specific fine-tuning, which severely limits cross-domain generalization and interpretability. To bridge this gap, we propose OMNIFLOW, a neuro-symbolic architecture designed to ground frozen multimodal LLMs in fundamental physical laws without requiring domain-specific parameter updates. OMNIFLOW introduces a novel \textit{Semantic-Symbolic Alignment} mechanism that projects high-dimensional flow tensors into topological linguistic descriptors, enabling the model to perceive physical structures rather than raw pixel values. Furthermore, we construct a Physics-Guided Chain-of-Thought (PG-CoT) workflow that orchestrates reasoning through dynamic constraint injection (e.g., mass conservation) and iterative reflexive verification. We evaluate OMNIFLOW on a comprehensive benchmark spanning microscopic turbulence, theoretical Navier-Stokes equations, and macroscopic global weather forecasting. Empirical results demonstrate that OMNIFLOW significantly outperforms traditional deep learning baselines in zero-shot generalization and few-shot adaptation tasks. Crucially, it offers transparent, physically consistent reasoning reports, marking a paradigm shift from black-box fitting to interpretable scientific reasoning.

Yuan Gao, Hao Wu, Fan Xu et al.

Long-term, high-fidelity simulation of slow-changing physical systems, such as the ocean and climate, presents a fundamental challenge in scientific computing. Traditional autoregressive machine learning models often fail in these tasks as minor errors accumulate and lead to rapid forecast degradation. To address this problem, we propose NeuralOM, a general neural operator framework designed for simulating complex, slow-changing dynamics. NeuralOM's core consists of two key innovations: (1) a Progressive Residual Correction Framework that decomposes the forecasting task into a series of fine-grained refinement steps, effectively suppressing long-term error accumulation; and (2) a Physics-Guided Graph Network whose built-in adaptive messaging mechanism explicitly models multi-scale physical interactions, such as gradient-driven flows and multiplicative couplings, thereby enhancing physical consistency while maintaining computational efficiency. We validate NeuralOM on the challenging task of global Subseasonal-to-Seasonal (S2S) ocean simulation. Extensive experiments demonstrate that NeuralOM not only surpasses state-of-the-art models in forecast accuracy and long-term stability, but also excels in simulating extreme events. For instance, at a 60-day lead time, NeuralOM achieves a 13.3% lower RMSE compared to the best-performing baseline, offering a stable, efficient, and physically-aware paradigm for data-driven scientific computing. Code link: https://github.com/YuanGao-YG/NeuralOM.

Yuzhou Nie, Zhun Wang, Ye Yu et al. · berkeley

Recent studies have discovered that large language models (LLM) may be ``fooled'' to output private information, including training data, system prompts, and personally identifiable information, under carefully crafted adversarial prompts. Existing red-teaming approaches for privacy leakage either rely on manual efforts or focus solely on system prompt extraction, making them ineffective for severe risks of training data leakage. We propose LeakAgent, a novel black-box red-teaming framework for LLM privacy leakage. Our framework trains an open-source LLM through reinforcement learning as the attack agent to generate adversarial prompts for both training data extraction and system prompt extraction. To achieve this, we propose a novel reward function to provide effective and fine-grained rewards and design novel mechanisms to balance exploration and exploitation during learning and enhance the diversity of adversarial prompts. Through extensive evaluations, we first show that LeakAgent significantly outperforms existing rule-based approaches in training data extraction and automated methods in system prompt leakage. We also demonstrate the effectiveness of LeakAgent in extracting system prompts from real-world applications in OpenAI's GPT Store. We further demonstrate LeakAgent's effectiveness in evading the existing guardrail defense and its helpfulness in enabling better safety alignment. Finally, we validate our customized designs through a detailed ablation study. We release our code here https://github.com/rucnyz/LeakAgent.

Xingyu Miao, Xueqi Qiu, Haoran Duan et al.

Conventional 3D style transfer methods rely on a fixed reference image to apply artistic patterns to 3D scenes. However, in practical applications such as virtual or augmented reality, users often prefer more flexible inputs, including textual descriptions and diverse imagery. In this work, we introduce a novel real-time styling technique M2StyleGS to generate a sequence of precisely color-mapped views. It utilizes 3D Gaussian Splatting (3DGS) as a 3D presentation and multi-modality knowledge refined by CLIP as a reference style. M2StyleGS resolves the abnormal transformation issue by employing a precise feature alignment, namely subdivisive flow, it strengthens the projection of the mapped CLIP text-visual combination feature to the VGG style feature. In addition, we introduce observation loss, which assists in the stylized scene better matching the reference style during the generation, and suppression loss, which suppresses the offset of reference color information throughout the decoding process. By integrating these approaches, M2StyleGS can employ text or images as references to generate a set of style-enhanced novel views. Our experiments show that M2StyleGS achieves better visual quality and surpasses the previous work by up to 32.92% in terms of consistency.

Xiaoyu Li, Peidong Li, Lijun Zhao et al.

3D Multi-Object Tracking (MOT) obtains significant performance improvements with the rapid advancements in 3D object detection, particularly in cost-effective multi-camera setups. However, the prevalent end-to-end training approach for multi-camera trackers results in detector-specific models, limiting their versatility. Moreover, current generic trackers overlook the unique features of multi-camera detectors, i.e., the unreliability of motion observations and the feasibility of visual information. To address these challenges, we propose RockTrack, a 3D MOT method for multi-camera detectors. Following the Tracking-By-Detection framework, RockTrack is compatible with various off-the-shelf detectors. RockTrack incorporates a confidence-guided preprocessing module to extract reliable motion and image observations from distinct representation spaces from a single detector. These observations are then fused in an association module that leverages geometric and appearance cues to minimize mismatches. The resulting matches are propagated through a staged estimation process, forming the basis for heuristic noise modeling. Additionally, we introduce a novel appearance similarity metric for explicitly characterizing object affinities in multi-camera settings. RockTrack achieves state-of-the-art performance on the nuScenes vision-only tracking leaderboard with 59.1% AMOTA while demonstrating impressive computational efficiency.

Jianpeng Cheng, Xian Wu, Jiangfan Zhang et al.

Recent research has demonstrated that Universal Multimodal Embedding (UME) benefits significantly from Chain-of-Thought (CoT) reasoning. In this paradigm, a generative model produces explicit reasoning traces for a multimodal query, with the final representation extracted from an <eos> embedding token attending to both the query and the reasoning. Despite its effectiveness, the computational overhead of generating explicit CoT traces is often prohibitive. In this work, we propose replacing explicit CoT with latent think tokens, which are interpreted as latent variables that can produce explicit CoT traces as observed variables. By optimizing think tokens using CoT generation loss and subsequent embedding tokens using contrastive loss, we produce high-performance, reasoning-aware representations at a constant inference cost. Our study investigates two key architectural designs: 1) how think and embeddings tokens should be extracted from the same LLM backbone. 2) how the tokens should be trained as two dependent tasks. We introduce TTE-Flash-2B, a reasoning-aware multimodal representation model that outperforms its explicit-CoT counterpart on the MMEB-v2 benchmark, while producing latent think tokens that are interpretable both textually and visually. Furthermore, zero-shot evaluation across 15 video datasets reveals scaling behavior as the number of think tokens increases, and motivating a pilot study of adaptive think budget allocation based on task requirements.

Minye Shao, Xingyu Miao, Haoran Duan et al.

3D medical image generation is essential for data augmentation and patient privacy, calling for reliable and efficient models suited for clinical practice. However, current methods suffer from limited anatomical fidelity, restricted axial length, and substantial computational cost, placing them beyond reach for regions with limited resources and infrastructure. We introduce TRACE, a framework that generates 3D medical images with spatiotemporal alignment using a 2D multimodal-conditioned diffusion approach. TRACE models sequential 2D slices as video frame pairs, combining segmentation priors and radiology reports for anatomical alignment, incorporating optical flow to sustain temporal coherence. During inference, an overlapping-frame strategy links frame pairs into a flexible length sequence, reconstructed into a spatiotemporally and anatomically aligned 3D volume. Experimental results demonstrate that TRACE effectively balances computational efficiency with preserving anatomical fidelity and spatiotemporal consistency. Code is available at: https://github.com/VinyehShaw/TRACE.

Fan Zhang, Tianyu Liu, Zhihong Zhu et al.

Recent studies have demonstrated the feasibility of modeling single-cell data as natural languages and the potential of leveraging powerful large language models (LLMs) for understanding cell biology. However, a comprehensive evaluation of LLMs' performance on language-driven single-cell analysis tasks still remains unexplored. Motivated by this challenge, we introduce CellVerse, a unified language-centric question-answering benchmark that integrates four types of single-cell multi-omics data and encompasses three hierarchical levels of single-cell analysis tasks: cell type annotation (cell-level), drug response prediction (drug-level), and perturbation analysis (gene-level). Going beyond this, we systematically evaluate the performance across 14 open-source and closed-source LLMs ranging from 160M to 671B on CellVerse. Remarkably, the experimental results reveal: (1) Existing specialist models (C2S-Pythia) fail to make reasonable decisions across all sub-tasks within CellVerse, while generalist models such as Qwen, Llama, GPT, and DeepSeek family models exhibit preliminary understanding capabilities within the realm of cell biology. (2) The performance of current LLMs falls short of expectations and has substantial room for improvement. Notably, in the widely studied drug response prediction task, none of the evaluated LLMs demonstrate significant performance improvement over random guessing. CellVerse offers the first large-scale empirical demonstration that significant challenges still remain in applying LLMs to cell biology. By introducing CellVerse, we lay the foundation for advancing cell biology through natural languages and hope this paradigm could facilitate next-generation single-cell analysis.

Zichuan Fu, Xian Wu, Yejing Wang et al.

Large Language Models (LLMs) have demonstrated exceptional capabilities across diverse natural language processing (NLP) tasks. The release of open-source LLMs like LLaMA and Qwen has triggered the development of numerous fine-tuned models tailored for various tasks and languages. In this paper, we explore an important question: is it possible to combine these specialized models to create a unified model with multi-task capabilities. We introduces Hierarchical Iterative Merging (Hi-Merging), a training-free method for unifying different specialized LLMs into a single model. Specifically, Hi-Merging employs model-wise and layer-wise pruning and scaling, guided by contribution analysis, to mitigate parameter conflicts. Extensive experiments on multiple-choice and question-answering tasks in both Chinese and English validate Hi-Merging's ability for multi-task learning. The results demonstrate that Hi-Merging consistently outperforms existing merging techniques and surpasses the performance of models fine-tuned on combined datasets in most scenarios. Code is available at: https://github.com/Applied-Machine-Learning-Lab/Hi-Merging.

Jialin Li, Yiwei Ren, Kai Pan et al.

Recently, Multi-Contrast MR Reconstruction (MCMR) has emerged as a hot research topic that leverages high-quality auxiliary modalities to reconstruct undersampled target modalities of interest. However, existing methods often struggle to generalize across different k-space undersampling patterns, requiring the training of a separate model for each specific pattern, which limits their practical applicability. To address this challenge, we propose UniFS, a Unified Frequency-Spatial Fusion model designed to handle multiple k-space undersampling patterns for MCMR tasks without any need for retraining. UniFS integrates three key modules: a Cross-Modal Frequency Fusion module, an Adaptive Mask-Based Prompt Learning module, and a Dual-Branch Complementary Refinement module. These modules work together to extract domain-invariant features from diverse k-space undersampling patterns while dynamically adapt to their own variations. Another limitation of existing MCMR methods is their tendency to focus solely on spatial information while neglect frequency characteristics, or extract only shallow frequency features, thus failing to fully leverage complementary cross-modal frequency information. To relieve this issue, UniFS introduces an adaptive prompt-guided frequency fusion module for k-space learning, significantly enhancing the model's generalization performance. We evaluate our model on the BraTS and HCP datasets with various k-space undersampling patterns and acceleration factors, including previously unseen patterns, to comprehensively assess UniFS's generalizability. Experimental results across multiple scenarios demonstrate that UniFS achieves state-of-the-art performance. Our code is available at https://github.com/LIKP0/UniFS.

Xiaoyu Li, Peidong Li, Xian Wu et al.

Spatio-temporal alignment is crucial for temporal modeling of end-to-end (E2E) perception in autonomous driving (AD), providing valuable structural and textural prior information. Existing methods typically rely on the attention mechanism to align objects across frames, simplifying the motion model with a unified explicit physical model (constant velocity, etc.). These approaches prefer semantic features for implicit alignment, challenging the importance of explicit motion modeling in the traditional perception paradigm. However, variations in motion states and object features across categories and frames render this alignment suboptimal. To address this, we propose HAT, a spatio-temporal alignment module that allows each object to adaptively decode the optimal alignment proposal from multiple hypotheses without direct supervision. Specifically, HAT first utilizes multiple explicit motion models to generate spatial anchors and motion-aware feature proposals for historical instances. It then performs multi-hypothesis decoding by incorporating semantic and motion cues embedded in cached object queries, ultimately providing the optimal alignment proposal for the target frame. On nuScenes, HAT consistently improves 3D temporal detectors and trackers across diverse baselines. It achieves state-of-the-art tracking results with 46.0% AMOTA on the test set when paired with the DETR3D detector. In an object-centric E2E AD method, HAT enhances perception accuracy (+1.3% mAP, +3.1% AMOTA) and reduces the collision rate by 32%. When semantics are corrupted (nuScenes-C), the enhancement of motion modeling by HAT enables more robust perception and planning in the E2E AD.

Jinlin Li, Yuran Wang, Yifei Yuan et al.

Large Vision-Language Models (LVLMs) have recently achieved impressive results in multimodal tasks such as image captioning and visual question answering. However, they remain prone to object hallucination -- generating descriptions of nonexistent or misidentified objects. Prior work has partially mitigated this via auxiliary training objectives or external modules, but challenges remain in terms of scalability, adaptability, and model independence. To address these limitations, we propose Adaptive Token Ensemble Decoding (ATED), a training-free, token-level ensemble framework that mitigates hallucination by aggregating predictions from multiple LVLMs during inference. ATED dynamically computes uncertainty-based weights for each model, reflecting their reliability at each decoding step. It also integrates diverse decoding paths to improve contextual grounding and semantic consistency. Experiments on standard hallucination detection benchmarks demonstrate that ATED significantly outperforms state-of-the-art methods, reducing hallucination without compromising fluency or relevance. Our findings highlight the benefits of adaptive ensembling and point to a promising direction for improving LVLM robustness in high-stakes applications. The code is available at https://github.com/jinlin2021/ATED.

Lei Li, Xiao Zhou, Yingying Zhang et al.

Medical question answering (QA) requires extensive access to domain-specific knowledge. A promising direction is to enhance large language models (LLMs) with external knowledge retrieved from medical corpora or parametric knowledge stored in model parameters. Existing approaches typically fall into two categories: Retrieval-Augmented Generation (RAG), which grounds model reasoning on externally retrieved evidence, and Generation-Augmented Generation (GAG), which depends solely on the models internal knowledge to generate contextual documents. However, RAG often suffers from noisy or incomplete retrieval, while GAG is vulnerable to hallucinated or inaccurate information due to unconstrained generation. Both issues can mislead reasoning and undermine answer reliability. To address these challenges, we propose MedRGAG, a unified retrieval-generation augmented framework that seamlessly integrates external and parametric knowledge for medical QA. MedRGAG comprises two key modules: Knowledge-Guided Context Completion (KGCC), which directs the generator to produce background documents that complement the missing knowledge revealed by retrieval; and Knowledge-Aware Document Selection (KADS), which adaptively selects an optimal combination of retrieved and generated documents to form concise yet comprehensive evidence for answer generation. Extensive experiments on five medical QA benchmarks demonstrate that MedRGAG achieves a 12.5% improvement over MedRAG and a 4.5% gain over MedGENIE, highlighting the effectiveness of unifying retrieval and generation for knowledge-intensive reasoning. Our code and data are publicly available at https://anonymous.4open.science/r/MedRGAG