1.2NAJan 13, 2015
Computational Realization of a Non-Equidistant Grid Sampling in Photoacoustics with a Non-Uniform FFTJulian Schmid, Thomas Glatz, Behrooz Zabihian et al.
To obtain the initial pressure from the collected data on a planar sensor arrangement in Photoacoustic tomography, there exists an exact analytic frequency domain reconstruction formula. An efficient realization of this formula needs to cope with the evaluation of the datas Fourier transform on a non-equispaced mesh. In this paper, we use the non-uniform fast Fourier transform to handle this issue and show its feasibility in 3D experiments. This is done in comparison to the standard approach that uses polynomial interpolation. Moreover, we investigate the effect and the utility of flexible sensor location on the quality of photoacoustic image reconstruction. The computational realization is accomplished by the use of a multi-dimensional non-uniform fast Fourier algorithm, where non-uniform data sampling is performed both in frequency and spatial domain. We show that with appropriate sampling the imaging quality can be significantly improved. Reconstructions with synthetic and real data show the superiority of this method.
2.7IVAug 8, 2022
Data-centric AI approach to improve optic nerve head segmentation and localization in OCT en face imagesThomas Schlegl, Heiko Stino, Michael Niederleithner et al.
The automatic detection and localization of anatomical features in retinal imaging data are relevant for many aspects. In this work, we follow a data-centric approach to optimize classifier training for optic nerve head detection and localization in optical coherence tomography en face images of the retina. We examine the effect of domain knowledge driven spatial complexity reduction on the resulting optic nerve head segmentation and localization performance. We present a machine learning approach for segmenting optic nerve head in 2D en face projections of 3D widefield swept source optical coherence tomography scans that enables the automated assessment of large amounts of data. Evaluation on manually annotated 2D en face images of the retina demonstrates that training of a standard U-Net can yield improved optic nerve head segmentation and localization performance when the underlying pixel-level binary classification task is spatially relaxed through domain knowledge.
1.1MED-PHJun 17
Quantitative Multi-Modal Optical Coherence Photoacoustic ElastographyEkaterina Sherina, Lisa Krainz, Wolfgang Drexler et al.
We present a novel multi-modal optical coherence photoacoustic elastography (OCPE) framework, which combines two imaging modalities, optical coherence tomography (OCT) and photoacoustic tomography (PAT), to enable complementary absorption-scattering measurements for the extraction of quantitative tissue features via quasi-static elastography. For this, we develop a sophisticated hybrid inversion algorithm for merging the complementary information layers contained in both OCT and PAT-based elastography measurements, and perform systematic evaluations to assess the impact of hybrid elastography data on strain and stiffness reconstructions. Studies on a silicone elastomer phantom demonstrate that the combined OCT-PAT approach outperforms single-modality OCT elastography and PAT elastography, yielding higher strain signal-to-noise ratio and improved stiffness estimates. These results establish the advantage of multi-modal complementary imaging and data merging for accurate, high-resolution elastographic strain and stiffness mapping in both scattering and absorbing materials.