Matheus Abrantes Cerqueira

Gilson Junior Soares, Matheus Abrantes Cerqueira, Jancarlo F. Gomes et al.

Salient Object Detection (SOD) methods can locate objects that stand out in an image, assign higher values to their pixels in a saliency map, and binarize the map outputting a predicted segmentation mask. A recent tendency is to investigate pre-trained lightweight models rather than deep neural networks in SOD tasks, coping with applications under limited computational resources. In this context, we have investigated lightweight networks using a methodology named Feature Learning from Image Markers (FLIM), which assumes that the encoder's kernels can be estimated from marker pixels on discriminative regions of a few representative images. This work proposes flyweight networks, hundreds of times lighter than lightweight models, for SOD by combining a FLIM encoder with an adaptive decoder, whose weights are estimated for each input image by a given heuristic function. Such FLIM networks are trained from three to four representative images only and without backpropagation, making the models suitable for applications under labeled data constraints as well. We study five adaptive decoders; two of them are introduced here. Differently from the previous ones that rely on one neuron per pixel with shared weights, the heuristic functions of the new adaptive decoders estimate the weights of each neuron per pixel. We compare FLIM models with adaptive decoders for two challenging SOD tasks with three lightweight networks from the state-of-the-art, two FLIM networks with decoders trained by backpropagation, and one FLIM network whose labeled markers define the decoder's weights. The experiments demonstrate the advantages of the proposed networks over the baselines, revealing the importance of further investigating such methods in new applications.

Matheus A. Cerqueira, Flávia Sprenger, Bernardo C. A. Teixeira et al.

Medical image segmentation is a relevant problem, with deep learning being an exponent. However, the necessity of a high volume of fully annotated images for training massive models can be a problem, especially for applications whose images present a great diversity, such as brain tumors, which can occur in different sizes and shapes. In contrast, a recent methodology, Feature Learning from Image Markers (FLIM), has involved an expert in the learning loop, producing small networks that require few images to train the convolutional layers. In this work, We employ an interactive method for image selection and training based on FLIM, exploring the user's knowledge. The results demonstrated that with our methodology, we could choose a small set of images to train the encoder of a U-shaped network, obtaining performance equal to manual selection and even surpassing the same U-shaped network trained with backpropagation and all training images.

Matheus A. Cerqueira, Flávia Sprenger, Bernardo C. A. Teixeira et al.

Brain tumor image segmentation is a challenging research topic in which deep-learning models have presented the best results. However, the traditional way of training those models from many pre-annotated images leaves several unanswered questions. Hence methodologies, such as Feature Learning from Image Markers (FLIM), have involved an expert in the learning loop to reduce human effort in data annotation and build models sufficiently deep for a given problem. FLIM has been successfully used to create encoders, estimating the filters of all convolutional layers from patches centered at marker voxels. In this work, we present Multi-Step (MS) FLIM - a user-assisted approach to estimating and selecting the most relevant filters from multiple FLIM executions. MS-FLIM is used only for the first convolutional layer, and the results already indicate improvement over FLIM. For evaluation, we build a simple U-shaped encoder-decoder network, named sU-Net, for glioblastoma segmentation using T1Gd and FLAIR MRI scans, varying the encoder's training method, using FLIM, MS-FLIM, and backpropagation algorithm. Also, we compared these sU-Nets with two State-Of-The-Art (SOTA) deep-learning models using two datasets. The results show that the sU-Net based on MS-FLIM outperforms the other training methods and achieves effectiveness within the standard deviations of the SOTA models.