Deniz Kucukahmetler

Osman Berke Guney, Deniz Kucukahmetler, Huseyin Ozkan

Objective: SSVEP-based BCI spellers assist individuals experiencing speech difficulties by enabling them to communicate at a fast rate. However, achieving a high information transfer rate (ITR) in most prominent methods requires an extensive calibration period before using the system, leading to discomfort for new users. We address this issue by proposing a novel method that adapts a powerful deep neural network (DNN) pre-trained on data from source domains (data from former users or participants of previous experiments), to the new user (target domain) using only unlabeled target data. Approach: Our method adapts the pre-trained DNN to the new user by minimizing our proposed custom loss function composed of self-adaptation and local-regularity terms. The self-adaptation term uses the pseudo-label strategy, while the novel local-regularity term exploits the data structure and forces the DNN to assign similar labels to adjacent instances. Main results: Our method achieves excellent ITRs of 201.15 bits/min and 145.02 bits/min on the benchmark and BETA datasets, respectively, and outperforms the state-of-the-art alternatives. Our code is available at https://github.com/osmanberke/SFDA-SSVEP-BCI Significance: The proposed method prioritizes user comfort by removing the burden of calibration while maintaining an excellent character identification accuracy and ITR. Because of these attributes, our approach could significantly accelerate the adoption of BCI systems into everyday life.

Deniz Kucukahmetler, Maximilian Jean Hemmann, Julian Mosig von Aehrenfeld et al.

Neural networks can accurately forecast complex dynamical systems, yet how they internally represent underlying latent geometry remains poorly understood. We study neural forecasters through the lens of representational alignment, introducing anchor-based, geometry-agnostic relative embeddings that remove rotational and scaling ambiguities in latent spaces. Applying this framework across seven canonical dynamical systems - ranging from periodic to chaotic - we reveal reproducible family-level structure: multilayer perceptrons align with other MLPs, recurrent networks with RNNs, while transformers and echo-state networks achieve strong forecasts despite weaker alignment. Alignment generally correlates with forecasting accuracy, yet high accuracy can coexist with low alignment. Relative geometry thus provides a simple, reproducible foundation for comparing how model families internalize and represent dynamical structure.

Semih Eren, Deniz Kucukahmetler, Nico Scherf

Accurately predicting distributed cortical responses to naturalistic stimuli requires models that integrate visual, auditory and semantic information over time. We present a hierarchical multimodal recurrent ensemble that maps pretrained video, audio, and language embeddings to fMRI time series recorded while four subjects watched almost 80 hours of movies provided by the Algonauts 2025 challenge. Modality-specific bidirectional RNNs encode temporal dynamics; their hidden states are fused and passed to a second recurrent layer, and lightweight subject-specific heads output responses for 1000 cortical parcels. Training relies on a composite MSE-correlation loss and a curriculum that gradually shifts emphasis from early sensory to late association regions. Averaging 100 model variants further boosts robustness. The resulting system ranked third on the competition leaderboard, achieving an overall Pearson r = 0.2094 and the highest single-parcel peak score (mean r = 0.63) among all participants, with particularly strong gains for the most challenging subject (Subject 5). The approach establishes a simple, extensible baseline for future multimodal brain-encoding benchmarks.