Shahar Kovalsky

Tal Amir, Shahar Kovalsky, Nadav Dym

The classical $\textit{Procrustes}$ problem is to find a rigid motion (orthogonal transformation and translation) that best aligns two given point-sets in the least-squares sense. The $\textit{Robust Procrustes}$ problem is an important variant, in which a power-1 objective is used instead of least squares to improve robustness to outliers. While the optimal solution of the least-squares problem can be easily computed in closed form, dating back to Schönemann (1966), no such solution is known for the power-1 problem. In this paper we propose a novel convex relaxation for the Robust Procrustes problem. Our relaxation enjoys several theoretical and practical advantages: Theoretically, we prove that our method provides a $\sqrt{2}$-factor approximation to the Robust Procrustes problem, and that, under appropriate assumptions, it exactly recovers the true rigid motion from point correspondences contaminated by outliers. In practice, we find in numerical experiments on both synthetic and real robust Procrustes problems, that our method performs similarly to the standard Iteratively Reweighted Least Squares (IRLS). However the convexity of our algorithm allows incorporating additional convex penalties, which are not readily amenable to IRLS. This turns out to be a substantial advantage, leading to improved results in high-dimensional problems, including non-rigid shape alignment and semi-supervised interlingual word translation.

Aaron Jacobson, Tingting Dan, Martin Styner et al.

Functional connectivity has been widely investigated to understand brain disease in clinical studies and imaging-based neuroscience, and analyzing changes in functional connectivity has proven to be valuable for understanding and computationally evaluating the effects on brain function caused by diseases or experimental stimuli. By using Mahalanobis data whitening prior to the use of dimensionality reduction algorithms, we are able to distill meaningful information from fMRI signals about subjects and the experimental stimuli used to prompt them. Furthermore, we offer an interpretation of Mahalanobis whitening as a two-stage de-individualization of data which is motivated by similarity as captured by the Bures distance, which is connected to quantum mechanics. These methods have potential to aid discoveries about the mechanisms that link brain function with cognition and behavior and may improve the accuracy and consistency of Alzheimer's diagnosis, especially in the preclinical stage of disease progression.

David Dov, Shahar Kovalsky, Jonathan Cohen et al.

We consider preoperative prediction of thyroid cancer based on ultra-high-resolution whole-slide cytopathology images. Inspired by how human experts perform diagnosis, our approach first identifies and classifies diagnostic image regions containing informative thyroid cells, which only comprise a tiny fraction of the entire image. These local estimates are then aggregated into a single prediction of thyroid malignancy. Several unique characteristics of thyroid cytopathology guide our deep-learning-based approach. While our method is closely related to multiple-instance learning, it deviates from these methods by using a supervised procedure to extract diagnostically relevant regions. Moreover, we propose to simultaneously predict thyroid malignancy, as well as a diagnostic score assigned by a human expert, which further allows us to devise an improved training strategy. Experimental results show that the proposed algorithm achieves performance comparable to human experts, and demonstrate the potential of using the algorithm for screening and as an assistive tool for the improved diagnosis of indeterminate cases.

Angjoo Kanazawa, Shahar Kovalsky, Ronen Basri et al.

Understanding how an animal can deform and articulate is essential for a realistic modification of its 3D model. In this paper, we show that such information can be learned from user-clicked 2D images and a template 3D model of the target animal. We present a volumetric deformation framework that produces a set of new 3D models by deforming a template 3D model according to a set of user-clicked images. Our framework is based on a novel locally-bounded deformation energy, where every local region has its own stiffness value that bounds how much distortion is allowed at that location. We jointly learn the local stiffness bounds as we deform the template 3D mesh to match each user-clicked image. We show that this seemingly complex task can be solved as a sequence of convex optimization problems. We demonstrate the effectiveness of our approach on cats and horses, which are highly deformable and articulated animals. Our framework produces new 3D models of animals that are significantly more plausible than methods without learned stiffness.

Chengpu Yu, Michel Verhaegen, Shahar Kovalsky et al.

The identification of structured state-space model has been intensively studied for a long time but still has not been adequately addressed. The main challenge is that the involved estimation problem is a non-convex (or bilinear) optimization problem. This paper is devoted to developing an identification method which aims to find the global optimal solution under mild computational burden. Key to the developed identification algorithm is to transform a bilinear estimation to a rank constrained optimization problem and further a difference of convex programming (DCP) problem. The initial condition for the DCP problem is obtained by solving its convex part of the optimization problem which happens to be a nuclear norm regularized optimization problem. Since the nuclear norm regularized optimization is the closest convex form of the low-rank constrained estimation problem, the obtained initial condition is always of high quality which provides the DCP problem a good starting point. The DCP problem is then solved by the sequential convex programming method. Finally, numerical examples are included to show the effectiveness of the developed identification algorithm.