Emmanuel Agu

Maryam Hasan, Elke Rundensteiner, Emmanuel Agu

Transfer learning has been widely used in natural language processing through deep pretrained language models, such as Bidirectional Encoder Representations from Transformers and Universal Sentence Encoder. Despite the great success, language models get overfitted when applied to small datasets and are prone to forgetting when fine-tuned with a classifier. To remedy this problem of forgetting in transferring deep pretrained language models from one domain to another domain, existing efforts explore fine-tuning methods to forget less. We propose DeepEmotex an effective sequential transfer learning method to detect emotion in text. To avoid forgetting problem, the fine-tuning step is instrumented by a large amount of emotion-labeled data collected from Twitter. We conduct an experimental study using both curated Twitter data sets and benchmark data sets. DeepEmotex models achieve over 91% accuracy for multi-class emotion classification on test dataset. We evaluate the performance of the fine-tuned DeepEmotex models in classifying emotion in EmoInt and Stimulus benchmark datasets. The models correctly classify emotion in 73% of the instances in the benchmark datasets. The proposed DeepEmotex-BERT model outperforms Bi-LSTM result on the benchmark datasets by 23%. We also study the effect of the size of the fine-tuning dataset on the accuracy of our models. Our evaluation results show that fine-tuning with a large set of emotion-labeled data improves both the robustness and effectiveness of the resulting target task model.

Wen Ge, Guanyi Mou, Emmanuel O. Agu et al.

Context-aware Human Activity Recognition (CHAR) is challenging due to the need to recognize the user's current activity from signals that vary significantly with contextual factors such as phone placements and the varied styles with which different users perform the same activity. In this paper, we argue that context-aware activity visit patterns in realistic in-the-wild data can equivocally be considered as a general graph representation learning task. We posit that exploiting underlying graphical patterns in CHAR data can improve CHAR task performance and representation learning. Building on the intuition that certain activities are frequently performed with the phone placed in certain positions, we focus on the context-aware human activity problem of recognizing the <Activity, Phone Placement> tuple. We demonstrate that CHAR data has an underlying graph structure that can be viewed as a heterogenous hypergraph that has multiple types of nodes and hyperedges (an edge connecting more than two nodes). Subsequently, learning <Activity, Phone Placement> representations becomes a graph node representation learning problem. After task transformation, we further propose a novel Heterogeneous HyperGraph Neural Network architecture for Context-aware Human Activity Recognition (HHGNN-CHAR), with three types of heterogeneous nodes (user, phone placement, and activity). Connections between all types of nodes are represented by hyperedges. Rigorous evaluation demonstrated that on an unscripted, in-the-wild CHAR dataset, our proposed framework significantly outperforms state-of-the-art (SOTA) baselines including CHAR models that do not exploit graphs, and GNN variants that do not incorporate heterogeneous nodes or hyperedges with overall improvements 14.04% on Matthews Correlation Coefficient (MCC) and 7.01% on Macro F1 scores.

Wen Ge, Guanyi Mou, Emmanuel O. Agu et al.

Human Activity Recognition (HAR) is a challenging, multi-label classification problem as activities may co-occur and sensor signals corresponding to the same activity may vary in different contexts (e.g., different device placements). This paper proposes a Deep Heterogeneous Contrastive Hyper-Graph Learning (DHC-HGL) framework that captures heterogenous Context-Aware HAR (CA-HAR) hypergraph properties in a message-passing and neighborhood-aggregation fashion. Prior work only explored homogeneous or shallow-node-heterogeneous graphs. DHC-HGL handles heterogeneous CA-HAR data by innovatively 1) Constructing three different types of sub-hypergraphs that are each passed through different custom HyperGraph Convolution (HGC) layers designed to handle edge-heterogeneity and 2) Adopting a contrastive loss function to ensure node-heterogeneity. In rigorous evaluation on two CA-HAR datasets, DHC-HGL significantly outperformed state-of-the-art baselines by 5.8% to 16.7% on Matthews Correlation Coefficient (MCC) and 3.0% to 8.4% on Macro F1 scores. UMAP visualizations of learned CA-HAR node embeddings are also presented to enhance model explainability.

Atifa Sarwar, Emmanuel O. Agu

To investigate whether a deep learning model can detect Covid-19 from disruptions in the human body's physiological (heart rate) and rest-activity rhythms (rhythmic dysregulation) caused by the SARS-CoV-2 virus. We propose CovidRhythm, a novel Gated Recurrent Unit (GRU) Network with Multi-Head Self-Attention (MHSA) that combines sensor and rhythmic features extracted from heart rate and activity (steps) data gathered passively using consumer-grade smart wearable to predict Covid-19. A total of 39 features were extracted (standard deviation, mean, min/max/avg length of sedentary and active bouts) from wearable sensor data. Biobehavioral rhythms were modeled using nine parameters (mesor, amplitude, acrophase, and intra-daily variability). These features were then input to CovidRhythm for predicting Covid-19 in the incubation phase (one day before biological symptoms manifest). A combination of sensor and biobehavioral rhythm features achieved the highest AUC-ROC of 0.79 [Sensitivity = 0.69, Specificity=0.89, F$_{0.1}$ = 0.76], outperforming prior approaches in discriminating Covid-positive patients from healthy controls using 24 hours of historical wearable physiological. Rhythmic features were the most predictive of Covid-19 infection when utilized either alone or in conjunction with sensor features. Sensor features predicted healthy subjects best. Circadian rest-activity rhythms that combine 24h activity and sleep information were the most disrupted. CovidRhythm demonstrates that biobehavioral rhythms derived from consumer-grade wearable data can facilitate timely Covid-19 detection. To the best of our knowledge, our work is the first to detect Covid-19 using deep learning and biobehavioral rhythms features derived from consumer-grade wearable data.

Palawat Busaranuvong, Emmanuel Agu, Reza Saadati Fard et al.

Infections in Diabetic Foot Ulcers (DFUs) can cause severe complications, including tissue death and limb amputation, highlighting the need for accurate, timely diagnosis. Previous machine learning methods have focused on identifying infections by analyzing wound images alone, without utilizing additional metadata such as medical notes. In this study, we aim to improve infection detection by introducing Synthetic Caption Augmented Retrieval for Wound Infection Detection (SCARWID), a novel deep learning framework that leverages synthetic textual descriptions to augment DFU images. SCARWID consists of two components: (1) Wound-BLIP, a Vision-Language Model (VLM) fine-tuned on GPT-4o-generated descriptions to synthesize consistent captions from images; and (2) an Image-Text Fusion module that uses cross-attention to extract cross-modal embeddings from an image and its corresponding Wound-BLIP caption. Infection status is determined by retrieving the top-k similar items from a labeled support set. To enhance the diversity of training data, we utilized a latent diffusion model to generate additional wound images. As a result, SCARWID outperformed state-of-the-art models, achieving average sensitivity, specificity, and accuracy of 0.85, 0.78, and 0.81, respectively, for wound infection classification. Displaying the generated captions alongside the wound images and infection detection results enhances interpretability and trust, enabling nurses to align SCARWID outputs with their medical knowledge. This is particularly valuable when wound notes are unavailable or when assisting novice nurses who may find it difficult to identify visual attributes of wound infection.

Palawat Busaranuvong, Emmanuel Agu, Deepak Kumar et al.

To detect infected wounds in Diabetic Foot Ulcers (DFUs) from photographs, preventing severe complications and amputations. Methods: This paper proposes the Guided Conditional Diffusion Classifier (ConDiff), a novel deep-learning infection detection model that combines guided image synthesis with a denoising diffusion model and distance-based classification. The process involves (1) generating guided conditional synthetic images by injecting Gaussian noise to a guide image, followed by denoising the noise-perturbed image through a reverse diffusion process, conditioned on infection status and (2) classifying infections based on the minimum Euclidean distance between synthesized images and the original guide image in embedding space. Results: ConDiff demonstrated superior performance with an accuracy of 83% and an F1-score of 0.858, outperforming state-of-the-art models by at least 3%. The use of a triplet loss function reduces overfitting in the distance-based classifier. Conclusions: ConDiff not only enhances diagnostic accuracy for DFU infections but also pioneers the use of generative discriminative models for detailed medical image analysis, offering a promising approach for improving patient outcomes.

Wen Ge, Guanyi Mou, Emmanuel O. Agu et al.

Prior work has primarily formulated CA-HAR as a multi-label classification problem, where model inputs are time-series sensor data and target labels are binary encodings representing whether a given activity or context occurs. These CA-HAR methods either predicted each label independently or manually imposed relationships using graphs. However, both strategies often neglect an essential aspect: activity labels have rich semantic relationships. For instance, walking, jogging, and running activities share similar movement patterns but differ in pace and intensity, indicating that they are semantically related. Consequently, prior CA-HAR methods often struggled to accurately capture these inherent and nuanced relationships, particularly on datasets with noisy labels typically used for CA-HAR or situations where the ideal sensor type is unavailable (e.g., recognizing speech without audio sensors). To address this limitation, we propose SEAL, which leverage LMs to encode CA-HAR activity labels to capture semantic relationships. LMs generate vector embeddings that preserve rich semantic information from natural language. Our SEAL approach encodes input-time series sensor data from smart devices and their associated activity and context labels (text) as vector embeddings. During training, SEAL aligns the sensor data representations with their corresponding activity/context label embeddings in a shared embedding space. At inference time, SEAL performs a similarity search, returning the CA-HAR label with the embedding representation closest to the input data. Although LMs have been widely explored in other domains, surprisingly, their potential in CA-HAR has been underexplored, making our approach a novel contribution to the field. Our research opens up new possibilities for integrating more advanced LMs into CA-HAR tasks.

Reza Saadati Fard, Emmanuel Agu, Palawat Busaranuvong et al.

Chronic wounds affect 8.5 million Americans, particularly the elderly and patients with diabetes. These wounds can take up to nine months to heal, making regular care essential to ensure healing and prevent severe outcomes like limb amputations. Many patients receive care at home from visiting nurses with varying levels of wound expertise, leading to inconsistent care. Problematic, non-healing wounds should be referred to wound specialists, but referral decisions in non-clinical settings are often erroneous, delayed, or unnecessary. This paper introduces the Deep Multimodal Wound Assessment Tool (DM-WAT), a machine learning framework designed to assist visiting nurses in deciding whether to refer chronic wound patients. DM-WAT analyzes smartphone-captured wound images and clinical notes from Electronic Health Records (EHRs). It uses DeiT-Base-Distilled, a Vision Transformer (ViT), to extract visual features from images and DeBERTa-base to extract text features from clinical notes. DM-WAT combines visual and text features using an intermediate fusion approach. To address challenges posed by a small and imbalanced dataset, it integrates image and text augmentation with transfer learning to achieve high performance. In evaluations, DM-WAT achieved 77% with std 3% accuracy and a 70% with std 2% F1 score, outperforming prior approaches. Score-CAM and Captum interpretation algorithms provide insights into specific parts of image and text inputs that influence recommendations, enhancing interpretability and trust.

Wen Ge, Guanyi Mou, Emmanuel O. Agu et al.

Human Activity Recognition (HAR) is essential in ubiquitous computing, with far-reaching real-world applications. While recent SOTA HAR research has demonstrated impressive performance, some key aspects remain under-explored. Firstly, HAR can be both highly contextualized and personalized. However, prior work has predominantly focused on being Context-Aware (CA) while largely ignoring the necessity of being User-Aware (UA). We argue that addressing the impact of innate user action-performing differences is equally crucial as considering external contextual environment settings in HAR tasks. Secondly, being user-aware makes the model acknowledge user discrepancies but does not necessarily guarantee mitigation of these discrepancies, i.e., unified predictions under the same activities. There is a need for a methodology that explicitly enforces closer (different user, same activity) representations. To bridge this gap, we introduce CLAUDIA, a novel framework designed to address these issues. Specifically, we expand the contextual scope of the CA-HAR task by integrating User Identification (UI) within the CA-HAR framework, jointly predicting both CA-HAR and UI in a new task called User and Context-Aware HAR (UCA-HAR). This approach enriches personalized and contextual understanding by jointly learning user-invariant and user-specific patterns. Inspired by SOTA designs in the visual domain, we introduce a supervised contrastive loss objective on instance-instance pairs to enhance model efficacy and improve learned feature quality. Evaluation across three real-world CA-HAR datasets reveals substantial performance enhancements, with average improvements ranging from 5.8% to 14.1% in Matthew's Correlation Coefficient and 3.0% to 7.2% in Macro F1 score.