Byoungwoo Park

Byoungwoo Park, Utkarsh A. Mishra, Jaemoo Choi et al.

Diffusion models provide strong priors for generating structured data, but many tasks require outputs beyond the scale on which these models are typically trained. Compositional generation addresses this by composing overlapping local plans from a pretrained short-horizon prior into a long-horizon output. However, standard composition primarily enforces agreement between neighboring local plans, yielding local consistency without directly specifying the global structure of the full composition. As a result, locally compatible plans may still form an implausible route, task sequence, or temporal evolution. Existing methods improve global coherence by repeatedly propagating local consistency signals or by adding inference-time optimization, but these procedures become expensive as the number or dimensionality of local plans increases. We propose Coarse-to-Fine Compositional Diffusion (CoFi), an inference-time sampler that separates global structure formation from local detail refinement. CoFi first aligns local denoised estimates around a shared coarse structure, producing a global scaffold that captures the long-range task-level arrangement. It then diffuses this scaffold to an intermediate noise level and denoises it with the same pretrained local prior, restoring local fine structure while preserving the scaffold-induced global coherence. Across long-horizon robotic planning, panoramic image generation, and long video generation, CoFi not only improves both global coherence and local sample quality over prior compositional baselines, but also requires 2-8x fewer denoiser evaluations.

Byoungwoo Park, Juho Lee, Guan-Horng Liu

Learning-based methods for sampling from the Gibbs distribution in finite-dimensional spaces have progressed quickly, yet theory and algorithmic design for infinite-dimensional function spaces remain limited. This gap persists despite their strong potential for sampling the paths of conditional diffusion processes, enabling efficient simulation of trajectories of diffusion processes that respect rare events or boundary constraints. In this work, we present the adjoint sampler for infinite-dimensional function spaces, a stochastic optimal control-based diffusion sampler that operates in function space and targets Gibbs-type distributions on infinite-dimensional Hilbert spaces. Our Functional Adjoint Sampler (FAS) generalizes Adjoint Sampling (Havens et al., 2025) to Hilbert spaces based on a SOC theory called stochastic maximum principle, yielding a simple and scalable matching-type objective for a functional representation. We show that FAS achieves superior transition path sampling performance across synthetic potential and real molecular systems, including Alanine Dipeptide and Chignolin.

Joonhyeong Park, Byoungwoo Park, Chang-Bae Bang et al.

We introduce a foundational model for brain dynamics that utilizes stochastic optimal control (SOC) and amortized inference. Our method features a continuous-discrete state space model (SSM) that can robustly handle the intricate and noisy nature of fMRI signals. To address computational limitations, we implement an approximation strategy grounded in the SOC framework. Additionally, we present a simulation-free latent dynamics approach that employs locally linear approximations, facilitating efficient and scalable inference. For effective representation learning, we derive an Evidence Lower Bound (ELBO) from the SOC formulation, which integrates smoothly with recent advancements in self-supervised learning (SSL), thereby promoting robust and transferable representations. Pre-trained on extensive datasets such as the UKB, our model attains state-of-the-art results across a variety of downstream tasks, including demographic prediction, trait analysis, disease diagnosis, and prognosis. Moreover, evaluating on external datasets such as HCP-A, ABIDE, and ADHD200 further validates its superior abilities and resilience across different demographic and clinical distributions. Our foundational model provides a scalable and efficient approach for deciphering brain dynamics, opening up numerous applications in neuroscience.

Byoungwoo Park, Juho Lee

Understanding the continuous evolution of populations from discrete temporal snapshots is a critical research challenge, particularly in fields like developmental biology and systems medicine where longitudinal tracking of individual entities is often impossible. Such trajectory inference is vital for unraveling the mechanisms of dynamic processes. While Schrödinger Bridge (SB) offer a potent framework, their traditional application to pairwise time points can be insufficient for systems defined by multiple intermediate snapshots. This paper introduces Multi-Marginal Schrödinger Bridge Matching (MSBM), a novel algorithm specifically designed for the multi-marginal SB problem. MSBM extends iterative Markovian fitting (IMF) to effectively handle multiple marginal constraints. This technique ensures robust enforcement of all intermediate marginals while preserving the continuity of the learned global dynamics across the entire trajectory. Empirical validations on synthetic data and real-world single-cell RNA sequencing datasets demonstrate the competitive or superior performance of MSBM in capturing complex trajectories and respecting intermediate distributions, all with notable computational efficiency.