Zhikai Chen

Zhikai Chen, Haitao Mao, Hang Li et al.

Learning on Graphs has attracted immense attention due to its wide real-world applications. The most popular pipeline for learning on graphs with textual node attributes primarily relies on Graph Neural Networks (GNNs), and utilizes shallow text embedding as initial node representations, which has limitations in general knowledge and profound semantic understanding. In recent years, Large Language Models (LLMs) have been proven to possess extensive common knowledge and powerful semantic comprehension abilities that have revolutionized existing workflows to handle text data. In this paper, we aim to explore the potential of LLMs in graph machine learning, especially the node classification task, and investigate two possible pipelines: LLMs-as-Enhancers and LLMs-as-Predictors. The former leverages LLMs to enhance nodes' text attributes with their massive knowledge and then generate predictions through GNNs. The latter attempts to directly employ LLMs as standalone predictors. We conduct comprehensive and systematical studies on these two pipelines under various settings. From comprehensive empirical results, we make original observations and find new insights that open new possibilities and suggest promising directions to leverage LLMs for learning on graphs. Our codes and datasets are available at https://github.com/CurryTang/Graph-LLM.

Zhikai Chen, Jialiang Gu, Junyu Yin et al.

LLM agents accumulate histories that outgrow their context windows, motivating a growing literature on memory systems. Yet most existing designs are tuned to a single scenario (multi-session chat or a single trajectory format), and there is little evidence that they generalize across the heterogeneous trajectories agents encounter in deployment. We revisit eight memory systems plus an agentic harness for search problems, on five scenarios: single-turn QA, multi-session chat, agentic-trajectory QA, memory stress tests, and long-horizon agentic tasks. The harness, which self-manages flat text-file storage via tool calls, achieves the best cross-task ranking, suggesting that memory performance hinges on giving the agent active control over storage and retrieval rather than on a passive store behind a fixed pipeline. We instantiate this insight in AutoMEM, an agentic memory harness with a self-managed tool interface that achieves the best cross-scenario generality among the systems we evaluate.

Zhikai Chen, Junyu Yin, Jialiang Gu et al.

Relational Foundation Models (RFMs) promise a single pre-trained predictor that, given any relational database, returns predictions in one forward pass via relational in-context learning (ICL). Yet a substantial gap separates open RFMs from their commercial counterparts, and the origin of this gap has not been systematically understood. We dissect a representative framework, the Relational Transformer (RT), from two perspectives. Model side: we show that RT performs relation-level ICL, and a kernel regression view shows it fails when sparse label-cell coverage yields an underdetermined regression. Data side: we ablate RT's pre-training source and find that existing synthetic-only pre-training and in-distribution pre-training drive the same architecture into different regimes, lazy vs. feature-learning. Probing this gap reveals that the missing ingredient is a support-identifiable relational latent in the label-generation process. These two diagnoses translate into (1) a dual-stage ICL architecture that combines the relational backbone with a batch-level ICL layer lifted from a pre-trained tabular foundation model to overcome relation-level label scarcity, and (2) a homophily-aware synthetic plus continual real-data pre-training mixture, augmented with a prototype-based regularization. These choices define OpenRFM, a simple yet effective RFM that improves average task performance by approximately 30% over the RT backbone and surpasses the commercial model KumoRFMv1 on a large set of evaluation tasks.

Dehong Kong, Lina Lei, Lingtao Zheng et al.

Prior work on aesthetic composition typically produces a single aesthetically pleasing crop, overlooking the narrative value of composing multiple shots from one scene. In practice, multi-shot composition is critical for downstream creative workflows: commercial posters often require multiple crops with different emphases (e.g., context, subject, and emotion/product details) to present key story beats. Therefore, we propose \textbf{Triple-Shot Compositions (TSC)}, a composition task that generates a three-shot set -- establishing, medium, and close-up -- from a single human-centric image, each paired with a brief shot description to support visual narration. To learn TSC with limited expert annotations, we introduce \textbf{ShotCrop} which undergoes a three-stage training process: it first applies Chain-of-Thought supervised fine-tuning to establish basic reasoning and aesthetic shot-cropping skills, then performs semi-supervised fine-tuning with high-confidence pseudo labels to further enhance aesthetic capability, and is finally optimized with Group Relative Policy Optimization for \textbf{ShotCrop} (GRPO-S) using a composite reward tailored for it. Specifically, our pseudo-labeling strategy combines MLLM-based scoring, aesthetic assessment, and CLIP similarity to retain high-confidence training signals. In addition, we present TSC-Bench, a benchmark of 1.2k expert-annotated test cases. Notably, ShotCrop achieves an average improvement of \textbf{2.82} times over GPT-5 in shot localization accuracy.

Haitao Mao, Zhikai Chen, Wei Jin et al.

Recent studies on Graph Neural Networks(GNNs) provide both empirical and theoretical evidence supporting their effectiveness in capturing structural patterns on both homophilic and certain heterophilic graphs. Notably, most real-world homophilic and heterophilic graphs are comprised of a mixture of nodes in both homophilic and heterophilic structural patterns, exhibiting a structural disparity. However, the analysis of GNN performance with respect to nodes exhibiting different structural patterns, e.g., homophilic nodes in heterophilic graphs, remains rather limited. In the present study, we provide evidence that Graph Neural Networks(GNNs) on node classification typically perform admirably on homophilic nodes within homophilic graphs and heterophilic nodes within heterophilic graphs while struggling on the opposite node set, exhibiting a performance disparity. We theoretically and empirically identify effects of GNNs on testing nodes exhibiting distinct structural patterns. We then propose a rigorous, non-i.i.d PAC-Bayesian generalization bound for GNNs, revealing reasons for the performance disparity, namely the aggregated feature distance and homophily ratio difference between training and testing nodes. Furthermore, we demonstrate the practical implications of our new findings via (1) elucidating the effectiveness of deeper GNNs; and (2) revealing an over-looked distribution shift factor on graph out-of-distribution problem and proposing a new scenario accordingly.

Xiaoze Liu, Ruowang Zhang, Amir H. Abdi et al.

Proactive agents read user activity as text and call an LLM on every event to decide whether to act. But user activity is not natively text: it is a structured event stream of (actor, verb, object, timestamp) tuples that the operating system already maintains in graph form. Rendering the structure as text and asking an LLM to recover it is a round-trip the system never had to take. We treat the always-on signal as graph updates rather than text and use a small temporal-graph-learning (TGL) model as the encoder: one forward pass yields a per-event trigger probability and a per-entity routing score, and only the downstream agent (turning a small structured handoff into a fluent user-facing sentence) is an LLM call, invoked only when the trigger fires. TGL improves F1 on each of 14 backbones (mean +16.7, up to +46.0); in trigger-architecture comparisons, one TGL checkpoint gives the strongest trigger AUCs and the most stable deployed threshold. It runs at 11.13 ms per event on a GPU server and 13.99 ms on a consumer laptop, approximately 4--7x and 12--83x faster than every single-forward LLM-as-trigger configuration tested in each regime, with an approximately 220 MiB BF16 resident footprint deployable on-device alongside the privacy-sensitive activity stream it consumes.

Zhikai Chen, Haitao Mao, Hongzhi Wen et al.

In recent years, there have been remarkable advancements in node classification achieved by Graph Neural Networks (GNNs). However, they necessitate abundant high-quality labels to ensure promising performance. In contrast, Large Language Models (LLMs) exhibit impressive zero-shot proficiency on text-attributed graphs. Yet, they face challenges in efficiently processing structural data and suffer from high inference costs. In light of these observations, this work introduces a label-free node classification on graphs with LLMs pipeline, LLM-GNN. It amalgamates the strengths of both GNNs and LLMs while mitigating their limitations. Specifically, LLMs are leveraged to annotate a small portion of nodes and then GNNs are trained on LLMs' annotations to make predictions for the remaining large portion of nodes. The implementation of LLM-GNN faces a unique challenge: how can we actively select nodes for LLMs to annotate and consequently enhance the GNN training? How can we leverage LLMs to obtain annotations of high quality, representativeness, and diversity, thereby enhancing GNN performance with less cost? To tackle this challenge, we develop an annotation quality heuristic and leverage the confidence scores derived from LLMs to advanced node selection. Comprehensive experimental results validate the effectiveness of LLM-GNN. In particular, LLM-GNN can achieve an accuracy of 74.9% on a vast-scale dataset \products with a cost less than 1 dollar.

Kai Guo, Zewen Liu, Zhikai Chen et al.

Large Language Models (LLMs) have demonstrated remarkable performance across various natural language processing tasks. Recently, several LLMs-based pipelines have been developed to enhance learning on graphs with text attributes, showcasing promising performance. However, graphs are well-known to be susceptible to adversarial attacks and it remains unclear whether LLMs exhibit robustness in learning on graphs. To address this gap, our work aims to explore the potential of LLMs in the context of adversarial attacks on graphs. Specifically, we investigate the robustness against graph structural and textual perturbations in terms of two dimensions: LLMs-as-Enhancers and LLMs-as-Predictors. Through extensive experiments, we find that, compared to shallow models, both LLMs-as-Enhancers and LLMs-as-Predictors offer superior robustness against structural and textual attacks.Based on these findings, we carried out additional analyses to investigate the underlying causes. Furthermore, we have made our benchmark library openly available to facilitate quick and fair evaluations, and to encourage ongoing innovative research in this field.

Yongsen Cheng, Kai Liu, Kaiwen Tao et al.

Large-scale visual generative models have achieved remarkable performance. However, their high computational and memory costs make deployment challenging in resource-constrained scenarios, such as interactive applications and personal single-GPU usage. Post-training quantization (PTQ) offers a practical solution by compressing pretrained models without expensive retraining. However, existing PTQ methods still suffer from severe quality degradation under extremely low-bit settings. In this paper, we identify channel ordering as an important but underexplored factor in per-group quantization. In this setting, each contiguous group shares one quantization scale. When channels with very different statistics are placed in the same group, the scale can be dominated by outliers and cause large quantization errors. Based on this observation, we propose PermuQuant, a simple and effective PTQ framework for low-bit diffusion models. PermuQuant sorts channels by a joint second-moment criterion before per-group quantization, placing channels with similar activation and weight statistics into the same group. It further uses a calibration-based acceptance rule to apply reordering only when the selected permutation reduces quantization error on calibration data. The selected permutations are absorbed into adjacent modules or applied to weights offline, avoiding explicit runtime permutation operations. Extensive experiments on multiple large diffusion models show that PermuQuant consistently reduces quantization error and outperforms existing PTQ baselines. On FLUX.1-dev with an RTX 5090, PermuQuant achieves up to a 1.8$\times$ single step speedup and reduces the DiT memory footprint by 3.5$\times$ under W4A4 NVFP4 quantization. Code will be available at https://github.com/yscheng04/PermuQuant.

Mengyuan Hu, An Zhang, Yong Chen et al.

We study the problem of covering the maximum number of vertices in a graph by a collection of vertex-disjoint stars, each with a number of satellites in a given interval $[k, \ell]$, where $1 \le k < \ell$ and $\ell$ can be infinity. This is referred to as sequential {\sc $[k, \ell]$-Star Packing} problem. It is solvable in polynomial time when $k = 1$, but becomes strongly NP-hard when $k \ge 2$. In this paper, we propose either the first or an improved approximation algorithm for the following four sequential settings: 1) a $\frac {k+1}2$-approximation algorithm when $k \ge 3$ and $\ell = \infty$, improving the previous best ratio of $\frac {(k+1)^2}{2k+1}$; 2) a $\frac 43$-approximation algorithm when $k = 2$ and $\ell = \infty$, improving the previous best ratio of $\frac 32$; 3) the first $(1 + \frac \ell{\ell+1})$-approximation algorithm when $2 = k < \ell$; and 4) the first $(1 + \max\left\{\frac {k-1}2, \frac {(k+1) \ell}{3 (\ell+1)}\right\})$-approximation algorithm when $3 \le k < \ell$. Besides the main algorithmic techniques being local search coupled with amortized analysis, we observe augmenting configurations to bridge two distant neighborhoods for a local improvement operation. Additionally, the problem has been shown APX-hard when $k \ge 3$; we prove its APX-hardness for the last remaining case where $k = 2$.

Zhikai Chen, Han Xie, Jian Zhang et al.

Predictive modeling over relational databases (RDBs) powers applications, yet remains challenging due to capturing both cross-table dependencies and complex feature interactions. Relational Deep Learning (RDL) methods automate feature engineering via message passing, while classical approaches like Deep Feature Synthesis (DFS) rely on predefined non-parametric aggregators. Despite performance gains, the comparative advantages of RDL over DFS and the design principles for selecting effective architectures remain poorly understood. We present a comprehensive study that unifies RDL and DFS in a shared design space and conducts architecture-centric searches across diverse RDB tasks. Our analysis yields three key findings: (1) RDL does not consistently outperform DFS, with performance being highly task-dependent; (2) no single architecture dominates across tasks, underscoring the need for task-aware model selection; and (3) validation accuracy is an unreliable guide for architecture choice. This search yields a model performance bank that links architecture configurations to their performance; leveraging this bank, we analyze the drivers of the RDL-DFS performance gap and introduce two task signals -- RDB task homophily and an affinity embedding that captures size, path, feature, and temporal structure -- whose correlation with the gap enables principled routing. Guided by these signals, we propose Relatron, a task embedding-based meta-selector that chooses between RDL and DFS and prunes the within-family search. Lightweight loss-landscape metrics further guard against brittle checkpoints by preferring flatter optima. In experiments, Relatron resolves the "more tuning, worse performance" effect and, in joint hyperparameter-architecture optimization, achieves up to 18.5% improvement over strong baselines with 10x lower cost than Fisher information-based alternatives.

Dongrui Liu, Qihan Ren, Chen Qian et al.

The rise of AI agents introduces complex safety and security challenges arising from autonomous tool use and environmental interactions. Current guardrail models lack agentic risk awareness and transparency in risk diagnosis. To introduce an agentic guardrail that covers complex and numerous risky behaviors, we first propose a unified three-dimensional taxonomy that orthogonally categorizes agentic risks by their source (where), failure mode (how), and consequence (what). Guided by this structured and hierarchical taxonomy, we introduce a new fine-grained agentic safety benchmark (ATBench) and a Diagnostic Guardrail framework for agent safety and security (AgentDoG). AgentDoG provides fine-grained and contextual monitoring across agent trajectories. More Crucially, AgentDoG can diagnose the root causes of unsafe actions and seemingly safe but unreasonable actions, offering provenance and transparency beyond binary labels to facilitate effective agent alignment. AgentDoG variants are available in three sizes (4B, 7B, and 8B parameters) across Qwen and Llama model families. Extensive experimental results demonstrate that AgentDoG achieves state-of-the-art performance in agentic safety moderation in diverse and complex interactive scenarios. All models and datasets are openly released.

Kai Liu, Leyang Chen, Wenbo Li et al.

Unifying multimodal understanding and generation has shown impressive capabilities in cutting-edge proprietary systems. However, evaluations of unified multimodal models (UMMs) remain decoupled, assessing their understanding and generation abilities separately with corresponding datasets. To address this, we propose UmniBench, a benchmark tailored for UMMs with omni-dimensional evaluation. First, UmniBench can assess the understanding, generation, and editing ability within a single evaluation process. Based on human-examined prompts and QA pairs, UmniBench leverages UMM itself to evaluate its generation and editing ability with its understanding ability. This simple but effective paradigm allows comprehensive evaluation of UMMs. Second, UmniBench covers 13 major domains and more than 200 concepts, ensuring a thorough inspection of UMMs. Moreover, UmniBench can also decouple and separately evaluate understanding, generation, and editing abilities, providing a fine-grained assessment. Based on UmniBench, we benchmark 24 popular models, including both UMMs and single-ability large models. We hope this benchmark provides a more comprehensive and objective view of unified models and logistical support for improving the performance of the community model.

Dadi Guo, Qingyu Liu, Dongrui Liu et al.

Large Language Model (LLM)-based agents are increasingly used as autonomous subordinates that carry out tasks for users. This raises the question of whether they may also engage in deception, similar to how individuals in human organizations lie to superiors to create a good image or avoid punishment. We observe and define agentic upward deception, a phenomenon in which an agent facing environmental constraints conceals its failure and performs actions that were not requested without reporting. To assess its prevalence, we construct a benchmark of 200 tasks covering five task types and eight realistic scenarios in a constrained environment, such as broken tools or mismatched information sources. Evaluations of 11 popular LLMs reveal that these agents typically exhibit action-based deceptive behaviors, such as guessing results, performing unsupported simulations, substituting unavailable information sources, and fabricating local files. We further test prompt-based mitigation and find only limited reductions, suggesting that it is difficult to eliminate and highlighting the need for stronger mitigation strategies to ensure the safety of LLM-based agents.

Xiao Liu, Kai Liu, Naiyang Guan et al.

Diffusion and rectified flow (RF) models generate high-fidelity images and videos, but their iterative velocity-field evaluations are computationally expensive. Existing caching methods accelerate sampling by skipping timesteps, yet their coarse approximations introduce accumulated errors over long skip intervals and degrade quality under aggressive acceleration. We propose TACache (Trajectory-Aware Cache), a training-free acceleration framework following a skip-then-compensate paradigm. TACache performs an orthogonal decomposition of discrete velocity acceleration along the RF trajectory into a parallel component and an orthogonal residual, isolating the magnitude and directional sources of per-step approximation error. The framework operates in two stages: offline, cumulative variation thresholds on the magnitude and direction indicators yield the skip schedule and bound how far each skip interval may extend; online, at each skipped step the offline statistics are combined with the sample's historical orthogonal direction to reconstruct the skipped velocity without additional model evaluations. Experiments on BAGEL, FLUX.1-dev, and Wan2.1-1.3B show that TACache achieves up to 4.14 speedup on text-to-image generation and 2.11 speedup on text-to-video generation, with consistent improvements over prior cache-based methods on all reference-based fidelity metrics. Code will be released soon.

Junyu Lin, Meizhen Liu, Xiufeng Huang et al.

As large language models (LLMs) are increasingly deployed in real-world applications, safety guardrails are required to go beyond coarse-grained filtering and support fine-grained, interpretable, and adaptable risk assessment. However, existing solutions often rely on rapid classification schemes or post-hoc rules, resulting in limited transparency, inflexible policies, or prohibitive inference costs. To this end, we present YuFeng-XGuard, a reasoning-centric guardrail model family designed to perform multi-dimensional risk perception for LLM interactions. Instead of producing opaque binary judgments, YuFeng-XGuard generates structured risk predictions, including explicit risk categories and configurable confidence scores, accompanied by natural language explanations that expose the underlying reasoning process. This formulation enables safety decisions that are both actionable and interpretable. To balance decision latency and explanatory depth, we adopt a tiered inference paradigm that performs an initial risk decision based on the first decoded token, while preserving ondemand explanatory reasoning when required. In addition, we introduce a dynamic policy mechanism that decouples risk perception from policy enforcement, allowing safety policies to be adjusted without model retraining. Extensive experiments on a diverse set of public safety benchmarks demonstrate that YuFeng-XGuard achieves stateof-the-art performance while maintaining strong efficiency-efficacy trade-offs. We release YuFeng-XGuard as an open model family, including both a full-capacity variant and a lightweight version, to support a wide range of deployment scenarios.

Junxian Li, Kai Liu, Zizhong Ding et al.

The development of separate-encoder Unified multimodal models (UMMs) comes with a rapidly growing inference cost due to dense visual token processing. In this paper, we focus on understanding-side visual token reduction for improving the efficiency of separate-encoder UMMs. While this topic has been widely studied for MLLMs, existing methods typically rely on attention scores, text-image similarity and so on, implicitly assuming that the final objective is discriminative reasoning. This assumption does not hold for UMMs, where understanding-side visual tokens must also preserve the model's capabilities for editing images. We propose G$^2$TR, a generation-guided visual token reduction framework for separate-encoder UMMs. Our key insight is that the generation branch provides a task-agnostic signal for identifying understanding-side visual tokens that are not only semantically relevant but also important for latent-space image reconstruction and generation. G$^2$TR estimates token importance from consistency with VAE latent, performs balanced token selection, and merges redundant tokens into retained representatives to reduce information loss. The method is training-free, plug-and-play, and applied only after the understanding encoding stage, making it compatible with existing UMM inference pipelines. Experiments on image understanding and editing benchmarks show that G$^2$TR substantially reduces visual tokens and prefill computation by 1.94x while maintaining both reasoning accuracy and editing quality, outperforming baselines on almost all benchmarks.

Zhikai Chen, Han Xie, Jian Zhang et al.

Recent years have witnessed significant advancements in graph machine learning (GML), with its applications spanning numerous domains. However, the focus of GML has predominantly been on developing powerful models, often overlooking a crucial initial step: constructing suitable graphs from common data formats, such as tabular data. This construction process is fundamental to applying graph-based models, yet it remains largely understudied and lacks formalization. Our research aims to address this gap by formalizing the graph construction problem and proposing an effective solution. We identify two critical challenges to achieve this goal: 1. The absence of dedicated datasets to formalize and evaluate the effectiveness of graph construction methods, and 2. Existing automatic construction methods can only be applied to some specific cases, while tedious human engineering is required to generate high-quality graphs. To tackle these challenges, we present a two-fold contribution. First, we introduce a set of datasets to formalize and evaluate graph construction methods. Second, we propose an LLM-based solution, AutoG, automatically generating high-quality graph schemas without human intervention. The experimental results demonstrate that the quality of constructed graphs is critical to downstream task performance, and AutoG can generate high-quality graphs that rival those produced by human experts. Our code can be accessible from https://github.com/amazon-science/Automatic-Table-to-Graph-Generation.

Juanhui Li, Haoyu Han, Zhikai Chen et al.

Session-based recommendation has gained increasing attention in recent years, with its aim to offer tailored suggestions based on users' historical behaviors within sessions. To advance this field, a variety of methods have been developed, with ID-based approaches typically demonstrating promising performance. However, these methods often face challenges with long-tail items and overlook other rich forms of information, notably valuable textual semantic information. To integrate text information, various methods have been introduced, mostly following a naive fusion framework. Surprisingly, we observe that fusing these two modalities does not consistently outperform the best single modality by following the naive fusion framework. Further investigation reveals an potential imbalance issue in naive fusion, where the ID dominates and text modality is undertrained. This suggests that the unexpected observation may stem from naive fusion's failure to effectively balance the two modalities, often over-relying on the stronger ID modality. This insight suggests that naive fusion might not be as effective in combining ID and text as previously expected. To address this, we propose a novel alternative training strategy AlterRec. It separates the training of ID and text, thereby avoiding the imbalance issue seen in naive fusion. Additionally, AlterRec designs a novel strategy to facilitate the interaction between the two modalities, enabling them to mutually learn from each other and integrate the text more effectively. Comprehensive experiments demonstrate the effectiveness of AlterRec in session-based recommendation. The implementation is available at https://github.com/Juanhui28/AlterRec.

Zhikai Chen, Haitao Mao, Jingzhe Liu et al.

Given the ubiquity of graph data and its applications in diverse domains, building a Graph Foundation Model (GFM) that can work well across different graphs and tasks with a unified backbone has recently garnered significant interests. A major obstacle to achieving this goal stems from the fact that graphs from different domains often exhibit diverse node features. Inspired by multi-modal models that align different modalities with natural language, the text has recently been adopted to provide a unified feature space for diverse graphs. Despite the great potential of these text-space GFMs, current research in this field is hampered by two problems. First, the absence of a comprehensive benchmark with unified problem settings hinders a clear understanding of the comparative effectiveness and practical value of different text-space GFMs. Second, there is a lack of sufficient datasets to thoroughly explore the methods' full potential and verify their effectiveness across diverse settings. To address these issues, we conduct a comprehensive benchmark providing novel text-space datasets and comprehensive evaluation under unified problem settings. Empirical results provide new insights and inspire future research directions. Our code and data are publicly available from \url{https://github.com/CurryTang/TSGFM}.

Haitao Mao, Zhikai Chen, Wenzhuo Tang et al. · deepmind

Graph Foundation Models (GFMs) are emerging as a significant research topic in the graph domain, aiming to develop graph models trained on extensive and diverse data to enhance their applicability across various tasks and domains. Developing GFMs presents unique challenges over traditional Graph Neural Networks (GNNs), which are typically trained from scratch for specific tasks on particular datasets. The primary challenge in constructing GFMs lies in effectively leveraging vast and diverse graph data to achieve positive transfer. Drawing inspiration from existing foundation models in the CV and NLP domains, we propose a novel perspective for the GFM development by advocating for a ``graph vocabulary'', in which the basic transferable units underlying graphs encode the invariance on graphs. We ground the graph vocabulary construction from essential aspects including network analysis, expressiveness, and stability. Such a vocabulary perspective can potentially advance the future GFM design in line with the neural scaling laws. All relevant resources with GFM design can be found here.

Wenqi Fan, Shijie Wang, Jiani Huang et al.

Graphs play an important role in representing complex relationships in various domains like social networks, knowledge graphs, and molecular discovery. With the advent of deep learning, Graph Neural Networks (GNNs) have emerged as a cornerstone in Graph Machine Learning (Graph ML), facilitating the representation and processing of graph structures. Recently, LLMs have demonstrated unprecedented capabilities in language tasks and are widely adopted in a variety of applications such as computer vision and recommender systems. This remarkable success has also attracted interest in applying LLMs to the graph domain. Increasing efforts have been made to explore the potential of LLMs in advancing Graph ML's generalization, transferability, and few-shot learning ability. Meanwhile, graphs, especially knowledge graphs, are rich in reliable factual knowledge, which can be utilized to enhance the reasoning capabilities of LLMs and potentially alleviate their limitations such as hallucinations and the lack of explainability. Given the rapid progress of this research direction, a systematic review summarizing the latest advancements for Graph ML in the era of LLMs is necessary to provide an in-depth understanding to researchers and practitioners. Therefore, in this survey, we first review the recent developments in Graph ML. We then explore how LLMs can be utilized to enhance the quality of graph features, alleviate the reliance on labeled data, and address challenges such as graph heterogeneity and out-of-distribution (OOD) generalization. Afterward, we delve into how graphs can enhance LLMs, highlighting their abilities to enhance LLM pre-training and inference. Furthermore, we investigate various applications and discuss the potential future directions in this promising field.

Zhikai Chen, Fuchen Long, Zhaofan Qiu et al.

Diffusion models are just at a tipping point for image super-resolution task. Nevertheless, it is not trivial to capitalize on diffusion models for video super-resolution which necessitates not only the preservation of visual appearance from low-resolution to high-resolution videos, but also the temporal consistency across video frames. In this paper, we propose a novel approach, pursuing Spatial Adaptation and Temporal Coherence (SATeCo), for video super-resolution. SATeCo pivots on learning spatial-temporal guidance from low-resolution videos to calibrate both latent-space high-resolution video denoising and pixel-space video reconstruction. Technically, SATeCo freezes all the parameters of the pre-trained UNet and VAE, and only optimizes two deliberately-designed spatial feature adaptation (SFA) and temporal feature alignment (TFA) modules, in the decoder of UNet and VAE. SFA modulates frame features via adaptively estimating affine parameters for each pixel, guaranteeing pixel-wise guidance for high-resolution frame synthesis. TFA delves into feature interaction within a 3D local window (tubelet) through self-attention, and executes cross-attention between tubelet and its low-resolution counterpart to guide temporal feature alignment. Extensive experiments conducted on the REDS4 and Vid4 datasets demonstrate the effectiveness of our approach.

Fan Li, Chonghuinan Wang, Lina Lei et al.

Common image editing tasks typically adopt powerful generative diffusion models as the leading paradigm for real-world content editing. Meanwhile, although reinforcement learning (RL) methods such as Diffusion-DPO and Flow-GRPO have further improved generation quality, efficiently applying Reinforcement Learning from Human Feedback (RLHF) to diffusion-based editing remains largely unexplored, due to a lack of scalable human-preference datasets and frameworks tailored to diverse editing needs. To fill this gap, we propose HP-Edit, a post-training framework for Human Preference-aligned Editing, and introduce RealPref-50K, a real-world dataset across eight common tasks and balancing common object editing. Specifically, HP-Edit leverages a small amount of human-preference scoring data and a pretrained visual large language model (VLM) to develop HP-Scorer--an automatic, human preference-aligned evaluator. We then use HP-Scorer both to efficiently build a scalable preference dataset and to serve as the reward function for post-training the editing model. We also introduce RealPref-Bench, a benchmark for evaluating real-world editing performance. Extensive experiments demonstrate that our approach significantly enhances models such as Qwen-Image-Edit-2509, aligning their outputs more closely with human preference.

Longxuan Yu, Delin Chen, Siheng Xiong et al.

Causal reasoning (CR) is a crucial aspect of intelligence, essential for problem-solving, decision-making, and understanding the world. While language models (LMs) can generate rationales for their outputs, their ability to reliably perform causal reasoning remains uncertain, often falling short in tasks requiring a deep understanding of causality. In this paper, we introduce CausalEval, a comprehensive review of research aimed at enhancing LMs for causal reasoning, coupled with an empirical evaluation of current models and methods. We categorize existing methods based on the role of LMs: either as reasoning engines or as helpers providing knowledge or data to traditional CR methods, followed by a detailed discussion of methodologies in each category. We then assess the performance of current LMs and various enhancement methods on a range of causal reasoning tasks, providing key findings and in-depth analysis. Finally, we present insights from current studies and highlight promising directions for future research. We aim for this work to serve as a comprehensive resource, fostering further advancements in causal reasoning with LMs.

Jingzhe Liu, Haitao Mao, Zhikai Chen et al.

Graph Neural Networks (GNNs) have emerged as a powerful tool to capture intricate network patterns, achieving success across different domains. However, existing GNNs require careful domain-specific architecture designs and training from scratch on each dataset, leading to an expertise-intensive process with difficulty in generalizing across graphs from different domains. Therefore, it can be hard for practitioners to infer which GNN model can generalize well to graphs from their domains. To address this challenge, we propose a novel cross-domain pretraining framework, "one model for one graph," which overcomes the limitations of previous approaches that failed to use a single GNN to capture diverse graph patterns across domains with significant gaps. Specifically, we pretrain a bank of expert models, with each one corresponding to a specific dataset. When inferring to a new graph, gating functions choose a subset of experts to effectively integrate prior model knowledge while avoiding negative transfer. Extensive experiments consistently demonstrate the superiority of our proposed method on both link prediction and node classification tasks.

Jingzhe Liu, Haitao Mao, Zhikai Chen et al.

Deep graph models (e.g., graph neural networks and graph transformers) have become important techniques for leveraging knowledge across various types of graphs. Yet, the neural scaling laws on graphs, i.e., how the performance of deep graph models changes with model and dataset sizes, have not been systematically investigated, casting doubts on the feasibility of achieving large graph models. To fill this gap, we benchmark many graph datasets from different tasks and make an attempt to establish the neural scaling laws on graphs from both model and data perspectives. The model size we investigated is up to 100 million parameters, and the dataset size investigated is up to 50 million samples. We first verify the validity of such laws on graphs, establishing proper formulations to describe the scaling behaviors. For model scaling, we identify that despite the parameter numbers, the model depth also plays an important role in affecting the model scaling behaviors, which differs from observations in other domains such as CV and NLP. For data scaling, we suggest that the number of graphs can not effectively measure the graph data volume in scaling law since the sizes of different graphs are highly irregular. Instead, we reform the data scaling law with the number of nodes or edges as the metric to address the irregular graph sizes. We further demonstrate that the reformed law offers a unified view of the data scaling behaviors for various fundamental graph tasks including node classification, link prediction, and graph classification. This work provides valuable insights into neural scaling laws on graphs, which can serve as an important tool for collecting new graph data and developing large graph models.

Bingheng Li, Zhikai Chen, Haoyu Han et al.

A fundamental challenge in understanding graph neural networks (GNNs) lies in characterizing their optimization dynamics and loss landscape geometry, critical for improving interpretability and robustness. While mode connectivity, a lens for analyzing geometric properties of loss landscapes has proven insightful for other deep learning architectures, its implications for GNNs remain unexplored. This work presents the first investigation of mode connectivity in GNNs. We uncover that GNNs exhibit distinct non-linear mode connectivity, diverging from patterns observed in fully-connected networks or CNNs. Crucially, we demonstrate that graph structure, rather than model architecture, dominates this behavior, with graph properties like homophily correlating with mode connectivity patterns. We further establish a link between mode connectivity and generalization, proposing a generalization bound based on loss barriers and revealing its utility as a diagnostic tool. Our findings further bridge theoretical insights with practical implications: they rationalize domain alignment strategies in graph learning and provide a foundation for refining GNN training paradigms.

Quang Truong, Zhikai Chen, Mingxuan Ju et al.

Relational databases underpin critical infrastructure across a wide range of domains, yet the design of generalizable pre-training strategies for learning from relational databases remains an open challenge due to task heterogeneity. Specifically, there exist infinitely many possible downstream tasks, as tasks are defined based on relational schema graphs, temporal dependencies, and SQL-defined label logics. An effective pre-training framework is desired to take these factors into account in order to obtain task-aware representations. By incorporating knowledge of the underlying distribution that drives label generation, downstream tasks can benefit from relevant side-channel information. To bridge this gap, we introduce Task Vector Estimation (TVE), a novel pre-training framework that constructs predictive supervisory signals via set-based aggregation over schema traversal graphs, explicitly modeling next-window relational dynamics. We formalize our approach through an information-theoretic lens, demonstrating that task-informed representations retain more relevant signals than those obtained without task priors. Extensive experiments on the RelBench benchmark show that TVE consistently outperforms traditional pre-training baselines. Our findings advocate for pre-training objectives that encode task heterogeneity and temporal structure as design principles for predictive modeling on relational databases.

Yu Song, Haitao Mao, Jiachen Xiao et al.

Pretraining plays a pivotal role in acquiring generalized knowledge from large-scale data, achieving remarkable successes as evidenced by large models in CV and NLP. However, progress in the graph domain remains limited due to fundamental challenges such as feature heterogeneity and structural heterogeneity. Recently, increasing efforts have been made to enhance node feature quality with Large Language Models (LLMs) on text-attributed graphs (TAGs), demonstrating superiority to traditional bag-of-words or word2vec techniques. These high-quality node features reduce the previously critical role of graph structure, resulting in a modest performance gap between Graph Neural Networks (GNNs) and structure-agnostic Multi-Layer Perceptrons (MLPs). Motivated by this, we introduce a feature-centric pretraining perspective by treating graph structure as a prior and leveraging the rich, unified feature space to learn refined interaction patterns that generalizes across graphs. Our framework, Graph Sequence Pretraining with Transformer (GSPT), samples node contexts through random walks and employs masked feature reconstruction to capture pairwise proximity in the LLM-unified feature space using a standard Transformer. By utilizing unified text representations rather than varying structures, our framework achieves significantly better transferability among graphs within the same domain. GSPT can be easily adapted to both node classification and link prediction, demonstrating promising empirical success on various datasets.

Junpei Liao, Zhikai Chen, Liang Yi et al.

Deep learning based video frame interpolation (VIF) method, aiming to synthesis the intermediate frames to enhance video quality, have been highly developed in the past few years. This paper investigates the adversarial robustness of VIF models. We apply adversarial attacks to VIF models and find that the VIF models are very vulnerable to adversarial examples. To improve attack efficiency, we suggest to make full use of the property of video frame interpolation task. The intuition is that the gap between adjacent frames would be small, leading to the corresponding adversarial perturbations being similar as well. Then we propose a novel attack method named Inter-frame Accelerate Attack (IAA) that initializes the perturbation as the perturbation for the previous adjacent frame and reduces the number of attack iterations. It is shown that our method can improve attack efficiency greatly while achieving comparable attack performance with traditional methods. Besides, we also extend our method to video recognition models which are higher level vision tasks and achieves great attack efficiency.

Zhikai Chen, Lingxi Xie, Shanmin Pang et al.

Deepfakes raised serious concerns on the authenticity of visual contents. Prior works revealed the possibility to disrupt deepfakes by adding adversarial perturbations to the source data, but we argue that the threat has not been eliminated yet. This paper presents MagDR, a mask-guided detection and reconstruction pipeline for defending deepfakes from adversarial attacks. MagDR starts with a detection module that defines a few criteria to judge the abnormality of the output of deepfakes, and then uses it to guide a learnable reconstruction procedure. Adaptive masks are extracted to capture the change in local facial regions. In experiments, MagDR defends three main tasks of deepfakes, and the learned reconstruction pipeline transfers across input data, showing promising performance in defending both black-box and white-box attacks.

Zhikai Chen, Lingxi Xie, Shanmin Pang et al.

There have been many efforts in attacking image classification models with adversarial perturbations, but the same topic on video classification has not yet been thoroughly studied. This paper presents a novel idea of video-based attack, which appends a few dummy frames (e.g., containing the texts of `thanks for watching') to a video clip and then adds adversarial perturbations only on these new frames. Our approach enjoys three major benefits, namely, a high success rate, a low perceptibility, and a strong ability in transferring across different networks. These benefits mostly come from the common dummy frame which pushes all samples towards the boundary of classification. On the other hand, such attacks are easily to be concealed since most people would not notice the abnormality behind the perturbed video clips. We perform experiments on two popular datasets with six state-of-the-art video classification models, and demonstrate the effectiveness of our approach in the scenario of universal video attacks.

Xin Jin, Zhibo Chen, Jianxin Lin et al.

Most existing single image deraining methods require learning supervised models from a large set of paired synthetic training data, which limits their generality, scalability and practicality in real-world multimedia applications. Besides, due to lack of labeled-supervised constraints, directly applying existing unsupervised frameworks to the image deraining task will suffer from low-quality recovery. Therefore, we propose an Unsupervised Deraining Generative Adversarial Network (UD-GAN) to tackle above problems by introducing self-supervised constraints from the intrinsic statistics of unpaired rainy and clean images. Specifically, we firstly design two collaboratively optimized modules, namely Rain Guidance Module (RGM) and Background Guidance Module (BGM), to take full advantage of rainy image characteristics: The RGM is designed to discriminate real rainy images from fake rainy images which are created based on outputs of the generator with BGM. Simultaneously, the BGM exploits a hierarchical Gaussian-Blur gradient error to ensure background consistency between rainy input and de-rained output. Secondly, a novel luminance-adjusting adversarial loss is integrated into the clean image discriminator considering the built-in luminance difference between real clean images and derained images. Comprehensive experiment results on various benchmarking datasets and different training settings show that UD-GAN outperforms existing image deraining methods in both quantitative and qualitative comparisons.