Ke Tao

Yixin Huang, Yiqi Jin, Ke Tao et al.

May-Thurner Syndrome (MTS) is a vascular condition that affects over 20\% of the population and significantly increases the risk of iliofemoral deep venous thrombosis. Accurate and early diagnosis of MTS using computed tomography (CT) remains a clinical challenge due to the subtle anatomical compression and variability across patients. In this paper, we propose MTS-Net, an end-to-end 3D deep learning framework designed to capture spatial-temporal patterns from CT volumes for reliable MTS diagnosis. MTS-Net builds upon 3D ResNet-18 by embedding a novel dual-enhanced positional multi-head self-attention (DEP-MHSA) module into the Transformer encoder of the network's final stages. The proposed DEP-MHSA employs multi-scale convolution and integrates positional embeddings into both attention weights and residual paths, enhancing spatial context preservation, which is crucial for identifying venous compression. To validate our approach, we curate the first publicly available dataset for MTS, MTS-CT, containing over 747 gender-balanced subjects with standard and enhanced CT scans. Experimental results demonstrate that MTS-Net achieves average 0.79 accuracy, 0.84 AUC, and 0.78 F1-score, outperforming baseline models including 3D ResNet, DenseNet-BC, and BabyNet. Our work not only introduces a new diagnostic architecture for MTS but also provides a high-quality benchmark dataset to facilitate future research in automated vascular syndrome detection. We make our code and dataset publicly available at:https://github.com/Nutingnon/MTS_dep_mhsa.

Krushi Patel, Kaidong Li, Ke Tao et al.

Colorectal cancer is the third most common cancer diagnosed in both men and women in the United States. Most colorectal cancers start as a growth on the inner lining of the colon or rectum, called 'polyp'. Not all polyps are cancerous, but some can develop into cancer. Early detection and recognition of the type of polyps is critical to prevent cancer and change outcomes. However, visual classification of polyps is challenging due to varying illumination conditions of endoscopy, variant texture, appearance, and overlapping morphology between polyps. More importantly, evaluation of polyp patterns by gastroenterologists is subjective leading to a poor agreement among observers. Deep convolutional neural networks have proven very successful in object classification across various object categories. In this work, we compare the performance of the state-of-the-art general object classification models for polyp classification. We trained a total of six CNN models end-to-end using a dataset of 157 video sequences composed of two types of polyps: hyperplastic and adenomatous. Our results demonstrate that the state-of-the-art CNN models can successfully classify polyps with an accuracy comparable or better than reported among gastroenterologists. The results of this study can guide future research in polyp classification.

Xi Mo, Ke Tao, Quan Wang et al.

Polyp has long been considered as one of the major etiologies to colorectal cancer which is a fatal disease around the world, thus early detection and recognition of polyps plays a crucial role in clinical routines. Accurate diagnoses of polyps through endoscopes operated by physicians becomes a challenging task not only due to the varying expertise of physicians, but also the inherent nature of endoscopic inspections. To facilitate this process, computer-aid techniques that emphasize fully-conventional image processing and novel machine learning enhanced approaches have been dedicatedly designed for polyp detection in endoscopic videos or images. Among all proposed algorithms, deep learning based methods take the lead in terms of multiple metrics in evolutions for algorithmic performance. In this work, a highly effective model, namely the faster region-based convolutional neural network (Faster R-CNN) is implemented for polyp detection. In comparison with the reported results of the state-of-the-art approaches on polyps detection, extensive experiments demonstrate that the Faster R-CNN achieves very competing results, and it is an efficient approach for clinical practice.