Frank J. W. M. Dankers

CV
h-index13
3papers
24citations
Novelty50%
AI Score45

3 Papers

4.1CVMar 31
Clinical DVH metrics as a loss function for 3D dose prediction in head and neck radiotherapy

Ruochen Gao, Marius Staring, Frank Dankers

Purpose: Deep-learning-based three-dimensional (3D) dose prediction is widely used in automated radiotherapy workflows. However, most existing models are trained with voxel-wise regression losses, which are poorly aligned with clinical plan evaluation criteria based on dose-volume histogram (DVH) metrics. This study aims to develop a clinically guided loss formulation that directly optimizes clinically used DVH metrics while remaining computationally efficient for head and neck (H\&N) dose prediction. Methods: We propose a clinical DVH metric loss (CDM loss) that incorporates differentiable \textit{D-metrics} and surrogate \textit{V-metrics}, together with a lossless bit-mask region-of-interest (ROI) encoding to improve training efficiency. The method was evaluated on 174 H\&N patients using a temporal split (137 training, 37 testing). Results: Compared with MAE- and DVH-curve based losses, CDM loss substantially improved target coverage and satisfied all clinical constraints. Using a standard 3D U-Net, the PTV Score was reduced from 1.544 (MAE) to 0.491 (MAE + CDM), while OAR sparing remained comparable. Bit-mask encoding reduced training time by 83\% and lowered GPU memory usage. Conclusion: Directly optimizing clinically used DVH metrics enables 3D dose predictions that are better aligned with clinical treatment planning criteria than conventional voxel-wise or DVH-curve-based supervision. The proposed CDM loss, combined with efficient ROI bit-mask encoding, provides a practical and scalable framework for H\&N dose prediction.

5.2IVDec 6, 2020Code
Esophageal Tumor Segmentation in CT Images using Dilated Dense Attention Unet (DDAUnet)

Sahar Yousefi, Hessam Sokooti, Mohamed S. Elmahdy et al.

Manual or automatic delineation of the esophageal tumor in CT images is known to be very challenging. This is due to the low contrast between the tumor and adjacent tissues, the anatomical variation of the esophagus, as well as the occasional presence of foreign bodies (e.g. feeding tubes). Physicians therefore usually exploit additional knowledge such as endoscopic findings, clinical history, additional imaging modalities like PET scans. Achieving his additional information is time-consuming, while the results are error-prone and might lead to non-deterministic results. In this paper we aim to investigate if and to what extent a simplified clinical workflow based on CT alone, allows one to automatically segment the esophageal tumor with sufficient quality. For this purpose, we present a fully automatic end-to-end esophageal tumor segmentation method based on convolutional neural networks (CNNs). The proposed network, called Dilated Dense Attention Unet (DDAUnet), leverages spatial and channel attention gates in each dense block to selectively concentrate on determinant feature maps and regions. Dilated convolutional layers are used to manage GPU memory and increase the network receptive field. We collected a dataset of 792 scans from 288 distinct patients including varying anatomies with \mbox{air pockets}, feeding tubes and proximal tumors. Repeatability and reproducibility studies were conducted for three distinct splits of training and validation sets. The proposed network achieved a $\mathrm{DSC}$ value of $0.79 \pm 0.20$, a mean surface distance of $5.4 \pm 20.2mm$ and $95\%$ Hausdorff distance of $14.7 \pm 25.0mm$ for 287 test scans, demonstrating promising results with a simplified clinical workflow based on CT alone. Our code is publicly available via \url{https://github.com/yousefis/DenseUnet_Esophagus_Segmentation}.

13.6LGFeb 8, 2021Code
Multi-Objective Learning to Predict Pareto Fronts Using Hypervolume Maximization

Timo M. Deist, Monika Grewal, Frank J. W. M. Dankers et al.

Real-world problems are often multi-objective with decision-makers unable to specify a priori which trade-off between the conflicting objectives is preferable. Intuitively, building machine learning solutions in such cases would entail providing multiple predictions that span and uniformly cover the Pareto front of all optimal trade-off solutions. We propose a novel approach for multi-objective training of neural networks to approximate the Pareto front during inference. In our approach, the neural networks are trained multi-objectively using a dynamic loss function, wherein each network's losses (corresponding to multiple objectives) are weighted by their hypervolume maximizing gradients. We discuss and illustrate why training processes to approximate Pareto fronts need to optimize on fronts of individual training samples instead of on only the front of average losses. Experiments on three multi-objective problems show that our approach returns outputs that are well-spread across different trade-offs on the approximated Pareto front without requiring the trade-off vectors to be specified a priori. Further, results of comparisons with the state-of-the-art approaches highlight the added value of our proposed approach, especially in asymmetric Pareto fronts.