CVSep 23, 2024
Generalizing monocular colonoscopy image depth estimation by uncertainty-based global and local fusion networkSijia Du, Chengfeng Zhou, Suncheng Xiang et al.
Objective: Depth estimation is crucial for endoscopic navigation and manipulation, but obtaining ground-truth depth maps in real clinical scenarios, such as the colon, is challenging. This study aims to develop a robust framework that generalizes well to real colonoscopy images, overcoming challenges like non-Lambertian surface reflection and diverse data distributions. Methods: We propose a framework combining a convolutional neural network (CNN) for capturing local features and a Transformer for capturing global information. An uncertainty-based fusion block was designed to enhance generalization by identifying complementary contributions from the CNN and Transformer branches. The network can be trained with simulated datasets and generalize directly to unseen clinical data without any fine-tuning. Results: Our method is validated on multiple datasets and demonstrates an excellent generalization ability across various datasets and anatomical structures. Furthermore, qualitative analysis in real clinical scenarios confirmed the robustness of the proposed method. Conclusion: The integration of local and global features through the CNN-Transformer architecture, along with the uncertainty-based fusion block, improves depth estimation performance and generalization in both simulated and real-world endoscopic environments. Significance: This study offers a novel approach to estimate depth maps for endoscopy images despite the complex conditions in clinic, serving as a foundation for endoscopic automatic navigation and other clinical tasks, such as polyp detection and segmentation.
CVJan 25, 2022
Real-time automatic polyp detection in colonoscopy using feature enhancement module and spatiotemporal similarity correlation unitJianwei Xu, Ran Zhao, Yizhou Yu et al.
Automatic detection of polyps is challenging because different polyps vary greatly, while the changes between polyps and their analogues are small. The state-of-the-art methods are based on convolutional neural networks (CNNs). However, they may fail due to lack of training data, resulting in high rates of missed detection and false positives (FPs). In order to solve these problems, our method combines the two-dimensional (2-D) CNN-based real-time object detector network with spatiotemporal information. Firstly, we use a 2-D detector network to detect static images and frames, and based on the detector network, we propose two feature enhancement modules-the FP Relearning Module (FPRM) to make the detector network learning more about the features of FPs for higher precision, and the Image Style Transfer Module (ISTM) to enhance the features of polyps for sensitivity improvement. In video detection, we integrate spatiotemporal information, which uses Structural Similarity (SSIM) to measure the similarity between video frames. Finally, we propose the Inter-frame Similarity Correlation Unit (ISCU) to combine the results obtained by the detector network and frame similarity to make the final decision. We verify our method on both private databases and publicly available databases. Experimental results show that these modules and units provide a performance improvement compared with the baseline method. Comparison with the state-of-the-art methods shows that the proposed method outperforms the existing ones which can meet real-time constraints. It's demonstrated that our method provides a performance improvement in sensitivity, precision and specificity, and has great potential to be applied in clinical colonoscopy.
IVMay 7, 2021
Self-Adaptive Transfer Learning for Multicenter Glaucoma Classification in Fundus Retina ImagesYiming Bao, Jun Wang, Tong Li et al.
The early diagnosis and screening of glaucoma are important for patients to receive treatment in time and maintain eyesight. Nowadays, deep learning (DL) based models have been successfully used for computer-aided diagnosis (CAD) of glaucoma from retina fundus images. However, a DL model pre-trained using a dataset from one hospital center may have poor performance on a dataset from another new hospital center and therefore its applications in the real scene are limited. In this paper, we propose a self-adaptive transfer learning (SATL) strategy to fill the domain gap between multicenter datasets. Specifically, the encoder of a DL model that is pre-trained on the source domain is used to initialize the encoder of a reconstruction model. Then, the reconstruction model is trained using only unlabeled image data from the target domain, which makes the encoder in the model adapt itself to extract useful high-level features both for target domain images encoding and glaucoma classification, simultaneously. Experimental results demonstrate that the proposed SATL strategy is effective in the domain adaptation task between one private and two public glaucoma diagnosis datasets, i.e. pri-RFG, REFUGE, and LAG. Moreover, the proposed strategy is completely independent of the source domain data, which meets the real scene application and the privacy protection policy.