Weronika Hryniewska-Guzik

Weronika Hryniewska-Guzik, Maria Kędzierska, Przemysław Biecek

Lung cancer and covid-19 have one of the highest morbidity and mortality rates in the world. For physicians, the identification of lesions is difficult in the early stages of the disease and time-consuming. Therefore, multi-task learning is an approach to extracting important features, such as lesions, from small amounts of medical data because it learns to generalize better. We propose a novel multi-task framework for classification, segmentation, reconstruction, and detection. To the best of our knowledge, we are the first ones who added detection to the multi-task solution. Additionally, we checked the possibility of using two different backbones and different loss functions in the segmentation task.

Mikolaj Spytek, Weronika Hryniewska-Guzik, Jaroslaw Zygierewicz et al.

The prediction of age is a challenging task with various practical applications in high-impact fields like the healthcare domain or criminology. Despite the growing number of models and their increasing performance, we still know little about how these models work. Numerous examples of failures of AI systems show that performance alone is insufficient, thus, new methods are needed to explore and explain the reasons for the model's predictions. In this paper, we investigate the use of Explainable Artificial Intelligence (XAI) for age prediction focusing on two specific modalities, EEG signal and lung X-rays. We share predictive models for age to facilitate further research on new techniques to explain models for these modalities.

Weronika Hryniewska, Adrianna Grudzień, Przemysław Biecek

The increased interest in deep learning applications, and their hard-to-detect biases result in the need to validate and explain complex models. However, current explanation methods are limited as far as both the explanation of the reasoning process and prediction results are concerned. They usually only show the location in the image that was important for model prediction. The lack of possibility to interact with explanations makes it difficult to verify and understand exactly how the model works. This creates a significant risk when using the model. The risk is compounded by the fact that explanations do not take into account the semantic meaning of the explained objects. To escape from the trap of static and meaningless explanations, we propose a tool and a process called LIMEcraft. LIMEcraft enhances the process of explanation by allowing a user to interactively select semantically consistent areas and thoroughly examine the prediction for the image instance in case of many image features. Experiments on several models show that our tool improves model safety by inspecting model fairness for image pieces that may indicate model bias. The code is available at: http://github.com/MI2DataLab/LIMEcraft

Yang Shen, Yusen Cai, Weronika Hryniewska-Guzik et al.

Existing self-supervised learning (SSL) methods primarily learn object-invariant representations but often neglect the spatial structure and relationships among object parts. To address this limitation, we introduce Spatial Prediction (SP), a spatially aware pretext regression task that predicts the relative position and scale between a pair of disentangled local views from the same image. By modeling part-to-part relationships in a continuous geometric space, SP encourages representations to capture fine-grained spatial dependencies beyond invariant categorical semantics, thereby learning the compositional structure of visual scenes. SP is implemented as a decoupled plug-in and can be seamlessly integrated into diverse SSL frameworks. Extensive experiments show consistent improvements across image recognition, fine-grained classification, semantic segmentation, and depth estimation, as well as substantial gains in out-of-distribution robustness for object recognition. To evaluate spatial reasoning, we introduce (1) a position and scale prediction task on image patch pairs and (2) a jigsaw understanding task requiring patch reordering and recognition after reconstruction. Strong performance on these tasks indicates improved spatial structure and geometric awareness. Overall, explicitly modeling spatial information provides an effective inductive bias for SSL, leading to more structured representations and better generalization. Code and models will be released.

Weronika Hryniewska-Guzik, Jakub Bilski, Bartosz Chrostowski et al.

Robust and highly accurate lung segmentation in X-rays is crucial in medical imaging. This study evaluates deep learning solutions for this task, ranking existing methods and analyzing their performance under diverse image modifications. Out of 61 analyzed papers, only nine offered implementation or pre-trained models, enabling assessment of three prominent methods: Lung VAE, TransResUNet, and CE-Net. The analysis revealed that CE-Net performs best, demonstrating the highest values in dice similarity coefficient and intersection over union metric.

Weronika Hryniewska-Guzik, Bartosz Sawicki, Przemysław Biecek

This paper presents a comprehensive comparative analysis of explainable artificial intelligence (XAI) ensembling methods. Our research brings three significant contributions. Firstly, we introduce a novel ensembling method, NormEnsembleXAI, that leverages minimum, maximum, and average functions in conjunction with normalization techniques to enhance interpretability. Secondly, we offer insights into the strengths and weaknesses of XAI ensemble methods. Lastly, we provide a library, facilitating the practical implementation of XAI ensembling, thus promoting the adoption of transparent and interpretable deep learning models.

Weronika Hryniewska-Guzik, Luca Longo, Przemysław Biecek

Explainable Artificial Intelligence has gained significant attention due to the widespread use of complex deep learning models in high-stake domains such as medicine, finance, and autonomous cars. However, different explanations often present different aspects of the model's behavior. In this research manuscript, we explore the potential of ensembling explanations generated by deep classification models using convolutional model. Through experimentation and analysis, we aim to investigate the implications of combining explanations to uncover a more coherent and reliable patterns of the model's behavior, leading to the possibility of evaluating the representation learned by the model. With our method, we can uncover problems of under-representation of images in a certain class. Moreover, we discuss other side benefits like features' reduction by replacing the original image with its explanations resulting in the removal of some sensitive information. Through the use of carefully selected evaluation metrics from the Quantus library, we demonstrated the method's superior performance in terms of Localisation and Faithfulness, compared to individual explanations.

Weronika Hryniewska-Guzik, Przemyslaw Biecek

The success of machine learning algorithms is inherently related to the extraction of meaningful features, as they play a pivotal role in the performance of these algorithms. Central to this challenge is the quality of data representation. However, the ability to generalize and extract these features effectively from unseen datasets is also crucial. In light of this, we introduce a novel concept: the polyrepresentation. Polyrepresentation integrates multiple representations of the same modality extracted from distinct sources, for example, vector embeddings from the Siamese Network, self-supervised models, and interpretable radiomic features. This approach yields better performance metrics compared to relying on a single representation. Additionally, in the context of X-ray images, we demonstrate the transferability of the created polyrepresentation to a smaller dataset, underscoring its potential as a pragmatic and resource-efficient approach in various image-related solutions. It is worth noting that the concept of polyprepresentation on the example of medical data can also be applied to other domains, showcasing its versatility and broad potential impact.

Weronika Hryniewska, Piotr Czarnecki, Jakub Wiśniewski et al.

Prevention is better than cure. This old truth applies not only to the prevention of diseases but also to the prevention of issues with AI models used in medicine. The source of malfunctioning of predictive models often lies not in the training process but reaches the data acquisition phase or design of the experiment phase. In this paper, we analyze in detail a single use case - a Kaggle competition related to the detection of abnormalities in X-ray lung images. We demonstrate how a series of simple tests for data imbalance exposes faults in the data acquisition and annotation process. Complex models are able to learn such artifacts and it is difficult to remove this bias during or after the training. Errors made at the data collection stage make it difficult to validate the model correctly. Based on this use case, we show how to monitor data and model balance (fairness) throughout the life cycle of a predictive model, from data acquisition to parity analysis of model scores.

Weronika Hryniewska, Przemysław Bombiński, Patryk Szatkowski et al.

The sudden outbreak and uncontrolled spread of COVID-19 disease is one of the most important global problems today. In a short period of time, it has led to the development of many deep neural network models for COVID-19 detection with modules for explainability. In this work, we carry out a systematic analysis of various aspects of proposed models. Our analysis revealed numerous mistakes made at different stages of data acquisition, model development, and explanation construction. In this work, we overview the approaches proposed in the surveyed Machine Learning articles and indicate typical errors emerging from the lack of deep understanding of the radiography domain. We present the perspective of both: experts in the field - radiologists and deep learning engineers dealing with model explanations. The final result is a proposed checklist with the minimum conditions to be met by a reliable COVID-19 diagnostic model.