SYJan 5, 2017
Platoon formation maximization through centralized routing and departure time coordinationVadim Sokolov, Jeffrey Larson, Todd Munson et al.
Platooning allows vehicles to travel with small intervehicle distance in a coordinated fashion thanks to vehicle-to-vehicle connectivity. When applied at a larger scale, platooning will create significant opportunities for energy savings due to reduced aerodynamic drag, as well as increased road capacity and congestion reduction resulting from shorter vehicle headways. However, these potential savings are maximized if platooning-capable vehicles spend most of their travel time within platoons. Ad hoc platoon formation may not ensure a high rate of platoon driving. In this paper we consider the problem of central coordination of platooning-capable vehicles. By coordinating their routes and departure times, we can maximize the fuel savings afforded by platooning vehicles. The resulting problem is a combinatorial optimization problem that considers the platoon coordination and vehicle routing problems simultaneously. We demonstrate our methodology by evaluating the benefits of a coordinated solution and comparing it with the uncoordinated case when platoons form only in an ad hoc manner. We compare the coordinated and uncoordinated scenarios on a grid network with different assumptions about demand and the time vehicles are willing to wait.
59.8LGMar 20
Scalable Cross-Facility Federated Learning for Scientific Foundation Models on Multiple SupercomputersYijiang Li, Zilinghan Li, Kyle Chard et al.
Artificial Intelligence for scientific applications increasingly requires training large models on data that cannot be centralized due to privacy constraints, data sovereignty, or the sheer volume of data generated. Federated learning (FL) addresses this by enabling collaborative training without centralizing raw data, but scientific applications demand model scales that requires extensive computing resources, typically offered at High Performance Computing (HPC) facilities. Deploying FL experiments across HPC facilities introduces challenges beyond cloud or enterprise settings. We present a comprehensive cross-facility FL framework for heterogeneous HPC environments, built on Advanced Privacy-Preserving Federated Learning (APPFL) framework with Globus Compute and Transfer orchestration, and evaluate it across four U.S. Department of Energy (DOE) leadership-class supercomputers. We demonstrate that FL experiments across HPC facilities are practically achievable, characterize key sources of heterogeneity impacting the training performance, and show that algorithmic choices matter significantly under realistic HPC scheduling conditions. We validate the scientific applicability by fine-tuning a large language model on a chemistry instruction dataset, and identify scheduler-aware algorithm design as a critical open challenge for future deployments.
SEJan 4, 2022Code
The PETSc Community Is the InfrastructureMark Adams, Satish Balay, Oana Marin et al.
The communities who develop and support open source scientific software packages are crucial to the utility and success of such packages. Moreover, these communities form an important part of the human infrastructure that enables scientific progress. This paper discusses aspects of the PETSc (Portable Extensible Toolkit for Scientific Computation) community, its organization, and technical approaches that enable community members to help each other efficiently.
OCMay 5, 2023
Robust A-Optimal Experimental Design for Bayesian Inverse ProblemsAhmed Attia, Sven Leyffer, Todd Munson
Optimal design of experiments for Bayesian inverse problems has recently gained wide popularity and attracted much attention, especially in the computational science and Bayesian inversion communities. An optimal design maximizes a predefined utility function that is formulated in terms of the elements of an inverse problem, an example being optimal sensor placement for parameter identification. The state-of-the-art algorithmic approaches following this simple formulation generally overlook misspecification of the elements of the inverse problem, such as the prior or the measurement uncertainties. This work presents an efficient algorithmic approach for designing optimal experimental design schemes for Bayesian inverse problems such that the optimal design is robust to misspecification of elements of the inverse problem. Specifically, we consider a worst-case scenario approach for the uncertain or misspecified parameters, formulate robust objectives, and propose an algorithmic approach for optimizing such objectives. Both relaxation and stochastic solution approaches are discussed with detailed analysis and insight into the interpretation of the problem and the proposed algorithmic approach. Extensive numerical experiments to validate and analyze the proposed approach are carried out for sensor placement in a parameter identification problem.
DCApr 10, 2021
Coupling streaming AI and HPC ensembles to achieve 100-1000x faster biomolecular simulationsAlexander Brace, Igor Yakushin, Heng Ma et al.
Machine learning (ML)-based steering can improve the performance of ensemble-based simulations by allowing for online selection of more scientifically meaningful computations. We present DeepDriveMD, a framework for ML-driven steering of scientific simulations that we have used to achieve orders-of-magnitude improvements in molecular dynamics (MD) performance via effective coupling of ML and HPC on large parallel computers. We discuss the design of DeepDriveMD and characterize its performance. We demonstrate that DeepDriveMD can achieve between 100-1000x acceleration for protein folding simulations relative to other methods, as measured by the amount of simulated time performed, while covering the same conformational landscape as quantified by the states sampled during a simulation. Experiments are performed on leadership-class platforms on up to 1020 nodes. The results establish DeepDriveMD as a high-performance framework for ML-driven HPC simulation scenarios, that supports diverse MD simulation and ML back-ends, and which enables new scientific insights by improving the length and time scales accessible with current computing capacity.
OCJan 15, 2021
Stochastic Learning Approach to Binary Optimization for Optimal Design of ExperimentsAhmed Attia, Sven Leyffer, Todd Munson
We present a novel stochastic approach to binary optimization for optimal experimental design (OED) for Bayesian inverse problems governed by mathematical models such as partial differential equations. The OED utility function, namely, the regularized optimality criterion, is cast into a stochastic objective function in the form of an expectation over a multivariate Bernoulli distribution. The probabilistic objective is then solved by using a stochastic optimization routine to find an optimal observational policy. The proposed approach is analyzed from an optimization perspective and also from a machine learning perspective with correspondence to policy gradient reinforcement learning. The approach is demonstrated numerically by using an idealized two-dimensional Bayesian linear inverse problem, and validated by extensive numerical experiments carried out for sensor placement in a parameter identification setup.
COMP-PHSep 15, 2020
Training neural networks under physical constraints using a stochastic augmented Lagrangian approachAlp Dener, Marco Andres Miller, Randy Michael Churchill et al.
We investigate the physics-constrained training of an encoder-decoder neural network for approximating the Fokker-Planck-Landau collision operator in the 5-dimensional kinetic fusion simulation in XGC. To train this network, we propose a stochastic augmented Lagrangian approach that utilizes pyTorch's native stochastic gradient descent method to solve the inner unconstrained minimization subproblem, paired with a heuristic update for the penalty factor and Lagrange multipliers in the outer augmented Lagrangian loop. Our training results for a single ion species case, with self-collisions and collision against electrons, show that the proposed stochastic augmented Lagrangian approach can achieve higher model prediction accuracy than training with a fixed penalty method for our application problem, with the accuracy high enough for practical applications in kinetic simulations.