MLMar 13
Nested Deep Learning Model Towards A Foundation Model for Brain Signal DataFangyi Wei, Jiajie Mo, Kai Zhang et al.
Epilepsy affects around 50 million people globally. Electroencephalography (EEG) or Magnetoencephalography (MEG) based spike detection plays a crucial role in diagnosis and treatment. Manual spike identification is time-consuming and requires specialized training that further limits the number of qualified professionals. To ease the difficulty, various algorithmic approaches have been developed. However, the existing methods face challenges in handling varying channel configurations and in identifying the specific channels where the spikes originate. A novel Nested Deep Learning (NDL) framework is proposed to overcome these limitations. NDL applies a weighted combination of signals across all channels, ensuring adaptability to different channel setups, and allows clinicians to identify key channels more accurately. Through theoretical analysis and empirical validation on real EEG/MEG datasets, NDL is shown to improve prediction accuracy, achieve channel localization, support cross-modality data integration, and adapt to various neurophysiological applications.
IVJan 18, 2020
Evolutionary Neural Architecture Search for Retinal Vessel SegmentationZhun Fan, Jiahong Wei, Guijie Zhu et al.
The accurate retinal vessel segmentation (RVS) is of great significance to assist doctors in the diagnosis of ophthalmology diseases and other systemic diseases. Manually designing a valid neural network architecture for retinal vessel segmentation requires high expertise and a large workload. In order to improve the performance of vessel segmentation and reduce the workload of manually designing neural network, we propose novel approach which applies neural architecture search (NAS) to optimize an encoder-decoder architecture for retinal vessel segmentation. A modified evolutionary algorithm is used to evolve the architectures of encoder-decoder framework with limited computing resources. The evolved model obtained by the proposed approach achieves top performance among all compared methods on the three datasets, namely DRIVE, STARE and CHASE_DB1, but with much fewer parameters. Moreover, the results of cross-training show that the evolved model is with considerable scalability, which indicates a great potential for clinical disease diagnosis.
IVJun 28, 2019
Accurate Retinal Vessel Segmentation via Octave Convolution Neural NetworkZhun Fan, Jiajie Mo, Benzhang Qiu et al.
Retinal vessel segmentation is a crucial step in diagnosing and screening various diseases, including diabetes, ophthalmologic diseases, and cardiovascular diseases. In this paper, we propose an effective and efficient method for vessel segmentation in color fundus images using encoder-decoder based octave convolution networks. Compared with other convolution networks utilizing standard convolution for feature extraction, the proposed method utilizes octave convolutions and octave transposed convolutions for learning multiple-spatial-frequency features, thus can better capture retinal vasculatures with varying sizes and shapes. To provide the network the capability of learning how to decode multifrequency features, we extend octave convolution and propose a new operation named octave transposed convolution. A novel architecture of convolutional neural network, named as Octave UNet integrating both octave convolutions and octave transposed convolutions is proposed based on the encoder-decoder architecture of UNet, which can generate high resolution vessel segmentation in one single forward feeding without post-processing steps. Comprehensive experimental results demonstrate that the proposed Octave UNet outperforms the baseline UNet achieving better or comparable performance to the state-of-the-art methods with fast processing speed. Specifically, the proposed method achieves 0.9664 / 0.9713 / 0.9759 / 0.9698 accuracy, 0.8374 / 0.8664 / 0.8670 / 0.8076 sensitivity, 0.9790 / 0.9798 / 0.9840 / 0.9831 specificity, 0.8127 / 0.8191 / 0.8313 / 0.7963 F1 score, and 0.9835 / 0.9875 / 0.9905 / 0.9845 Area Under Receiver Operating Characteristic curve, on DRIVE, STARE, CHASE_DB1, and HRF datasets, respectively.
NEJul 27, 2017
An Improved Epsilon Constraint-handling Method in MOEA/D for CMOPs with Large Infeasible RegionsZhun Fan, Wenji Li, Xinye Cai et al.
This paper proposes an improved epsilon constraint-handling mechanism, and combines it with a decomposition-based multi-objective evolutionary algorithm (MOEA/D) to solve constrained multi-objective optimization problems (CMOPs). The proposed constrained multi-objective evolutionary algorithm (CMOEA) is named MOEA/D-IEpsilon. It adjusts the epsilon level dynamically according to the ratio of feasible to total solutions (RFS) in the current population. In order to evaluate the performance of MOEA/D-IEpsilon, a new set of CMOPs with two and three objectives is designed, having large infeasible regions (relative to the feasible regions), and they are called LIR-CMOPs. Then the fourteen benchmarks, including LIR-CMOP1-14, are used to test MOEA/D-IEpsilon and four other decomposition-based CMOEAs, including MOEA/D-Epsilon, MOEA/D-SR, MOEA/D-CDP and C-MOEA/D. The experimental results indicate that MOEA/D-IEpsilon is significantly better than the other four CMOEAs on all of the test instances, which shows that MOEA/D-IEpsilon is more suitable for solving CMOPs with large infeasible regions. Furthermore, a real-world problem, namely the robot gripper optimization problem, is used to test the five CMOEAs. The experimental results demonstrate that MOEA/D-IEpsilon also outperforms the other four CMOEAs on this problem.