Bei Wang

Shakiba Khourashahi, Ilia Jahanshahi, Bei Wang et al.

As data becomes increasingly central across engineering and scientific disciplines, effective visualization is essential for interpreting complex, high-dimensional structures. Dimensionality reduction techniques project high-dimensional data into lower dimensions while aiming to preserve structural properties such as pairwise distances and local neighborhoods. In this paper, we focus on improving homological preservation, that is, the retention of topological features such as connected components and loops, which is critical for maintaining global shape and continuity. We first introduce AdaMapper, a Mapper-based algorithm that leverages persistence diagrams to guide both skeleton construction and landmark selection. AdaMapper incorporates an adaptive refinement strategy that automatically increases cover resolution in regions exhibiting topological loops. We then propose AdaHIsomap, which extends landmark Isomap by incorporating homology-informed landmark selection and augmenting it with random anchor points to better balance distance and homology preservation. We evaluate both methods on a diverse set of datasets, including high-dimensional point clouds, scientific simulations, networks, and image data, and benchmark their performance against state-of-the-art approaches.

Bei Wang, Greg Miller, Phil Colella

The numerical solution of high dimensional Vlasov equation is usually performed by particle-in-cell (PIC) methods. However, due to the well-known numerical noise, it is challenging to use PIC methods to get a precise description of the distribution function in phase space. To control the numerical error, we introduce an adaptive phase-space remapping which regularizes the particle distribution by periodically reconstructing the distribution function on a hierarchy of phase-space grids with high-order interpolations. The positivity of the distribution function can be preserved by using a local redistribution technique. The method has been successfully applied to a set of classical plasma problems in one dimension. In this paper, we present the algorithm for the two dimensional Vlasov-Poisson equations. An efficient Poisson solver with infinite domain boundary conditions is used. The parallel scalability of the algorithm on massively parallel computers will be discussed.

Zhichao Xu, Fengran Mo, Zhiqi Huang et al.

The period from 2019 to the present marks one of the most significant paradigm shifts in information retrieval (IR) and natural language processing (NLP), culminating in the emergence of powerful large language models (LLMs) from 2022 onward. Methods based on pretrained encoder-only architectures (e.g., BERT) as well as decoder-only generative LLMs have outperformed many earlier approaches, demonstrating particularly strong performance in zero-shot scenarios and complex reasoning tasks. This survey examines the evolution of model architectures in IR, with a focus on two key aspects: backbone models for feature extraction and end-to-end system architectures for relevance estimation. To maintain analytical clarity, we deliberately separate architectural design from training methodologies, enabling a focused examination of structural innovations in IR systems. We trace the progression from traditional term-based retrieval models to modern neural approaches, highlighting the transformative impact of transformer-based architectures and subsequent LLM developments. The survey concludes with a forward-looking discussion of open challenges and emerging research directions, including architectural optimization for efficiency and scalability, robust handling of multimodal and multilingual data, and adaptation to novel application domains such as autonomous search agents, which may represent the next paradigm in IR.

Lin Yan, Paul Aaron Ullrich, Luke P. Van Roekel et al.

Critical point tracking is a core topic in scientific visualization for understanding the dynamic behavior of time-varying vector field data. The topological notion of robustness has been introduced recently to quantify the structural stability of critical points, that is, the robustness of a critical point is the minimum amount of perturbation to the vector field necessary to cancel it. A theoretical basis has been established previously that relates critical point tracking with the notion of robustness, in particular, critical points could be tracked based on their closeness in stability, measured by robustness, instead of just distance proximities within the domain. However, in practice, the computation of classic robustness may produce artifacts when a critical point is close to the boundary of the domain; thus, we do not have a complete picture of the vector field behavior within its local neighborhood. To alleviate these issues, we introduce a multilevel robustness framework for the study of 2D time-varying vector fields. We compute the robustness of critical points across varying neighborhoods to capture the multiscale nature of the data and to mitigate the boundary effect suffered by the classic robustness computation. We demonstrate via experiments that such a new notion of robustness can be combined seamlessly with existing feature tracking algorithms to improve the visual interpretability of vector fields in terms of feature tracking, selection, and comparison for large-scale scientific simulations. We observe, for the first time, that the minimum multilevel robustness is highly correlated with physical quantities used by domain scientists in studying a real-world tropical cyclone dataset. Such observation helps to increase the physical interpretability of robustness.

Amirhossein Arzani, Lingxiao Yuan, Pania Newell et al.

Although deep learning has achieved remarkable success in various scientific machine learning applications, its opaque nature poses concerns regarding interpretability and generalization capabilities beyond the training data. Interpretability is crucial and often desired in modeling physical systems. Moreover, acquiring extensive datasets that encompass the entire range of input features is challenging in many physics-based learning tasks, leading to increased errors when encountering out-of-distribution (OOD) data. In this work, motivated by the field of functional data analysis (FDA), we propose generalized functional linear models as an interpretable surrogate for a trained deep learning model. We demonstrate that our model could be trained either based on a trained neural network (post-hoc interpretation) or directly from training data (interpretable operator learning). A library of generalized functional linear models with different kernel functions is considered and sparse regression is used to discover an interpretable surrogate model that could be analytically presented. We present test cases in solid mechanics, fluid mechanics, and transport. Our results demonstrate that our model can achieve comparable accuracy to deep learning and can improve OOD generalization while providing more transparency and interpretability. Our study underscores the significance of interpretable representation in scientific machine learning and showcases the potential of functional linear models as a tool for interpreting and generalizing deep learning.

Emilie Purvine, Davis Brown, Brett Jefferson et al.

Topological data analysis (TDA) is a branch of computational mathematics, bridging algebraic topology and data science, that provides compact, noise-robust representations of complex structures. Deep neural networks (DNNs) learn millions of parameters associated with a series of transformations defined by the model architecture, resulting in high-dimensional, difficult-to-interpret internal representations of input data. As DNNs become more ubiquitous across multiple sectors of our society, there is increasing recognition that mathematical methods are needed to aid analysts, researchers, and practitioners in understanding and interpreting how these models' internal representations relate to the final classification. In this paper, we apply cutting edge techniques from TDA with the goal of gaining insight into the interpretability of convolutional neural networks used for image classification. We use two common TDA approaches to explore several methods for modeling hidden-layer activations as high-dimensional point clouds, and provide experimental evidence that these point clouds capture valuable structural information about the model's process. First, we demonstrate that a distance metric based on persistent homology can be used to quantify meaningful differences between layers, and we discuss these distances in the broader context of existing representational similarity metrics for neural network interpretability. Second, we show that a mapper graph can provide semantic insight into how these models organize hierarchical class knowledge at each layer. These observations demonstrate that TDA is a useful tool to help deep learning practitioners unlock the hidden structures of their models.

Kuangshi Ai, Haichao Miao, Kaiyuan Tang et al.

Recent advances in large language models (LLMs) have enabled agentic systems that translate natural language intent into executable scientific visualization (SciVis) tasks. Despite rapid progress, the community lacks a principled and reproducible benchmark for evaluating these emerging SciVis agents in realistic, multi-step analysis settings. We present SciVisAgentBench, a comprehensive and extensible benchmark for evaluating scientific data analysis and visualization agents. Our benchmark is grounded in a structured taxonomy spanning four dimensions: application domain, data type, complexity level, and visualization operation. It currently comprises 108 expert-crafted cases covering diverse SciVis scenarios. To enable reliable assessment, we introduce a multimodal outcome-centric evaluation pipeline that combines LLM-based judging with deterministic evaluators, including image-based metrics, code checkers, rule-based verifiers, and case-specific evaluators. We also conduct a validity study with 12 SciVis experts to examine the agreement between human and LLM judges. Using this framework, we evaluate representative SciVis agents and general-purpose coding agents to establish initial baselines and reveal capability gaps. SciVisAgentBench is designed as a living benchmark to support systematic comparison, diagnose failure modes, and drive progress in agentic SciVis. The benchmark is available at https://scivisagentbench.github.io/.

Lin Yan, Hanqi Guo, Thomas Peterka et al.

Tropical cyclones (TCs) are among the most destructive weather systems. Realistically and efficiently detecting and tracking TCs are critical for assessing their impacts and risks. Recently, a multilevel robustness framework has been introduced to study the critical points of time-varying vector fields. The framework quantifies the robustness of critical points across varying neighborhoods. By relating the multilevel robustness with critical point tracking, the framework has demonstrated its potential in cyclone tracking. An advantage is that it identifies cyclonic features using only 2D wind vector fields, which is encouraging as most tracking algorithms require multiple dynamic and thermodynamic variables at different altitudes. A disadvantage is that the framework does not scale well computationally for datasets containing a large number of cyclones. This paper introduces a topologically robust physics-informed tracking framework (TROPHY) for TC tracking. The main idea is to integrate physical knowledge of TC to drastically improve the computational efficiency of multilevel robustness framework for large-scale climate datasets. First, during preprocessing, we propose a physics-informed feature selection strategy to filter 90% of critical points that are short-lived and have low stability, thus preserving good candidates for TC tracking. Second, during in-processing, we impose constraints during the multilevel robustness computation to focus only on physics-informed neighborhoods of TCs. We apply TROPHY to 30 years of 2D wind fields from reanalysis data in ERA5 and generate a number of TC tracks. In comparison with the observed tracks, we demonstrate that TROPHY can capture TC characteristics that are comparable to and sometimes even better than a well-validated TC tracking algorithm that requires multiple dynamic and thermodynamic scalar fields.

Xinyuan Yan, Rita Sevastjanova, Mennatallah El-Assady et al.

Neural networks encode inputs as high-dimensional vectors, known as representations, that capture how models process data by encoding task-relevant structure and semantics. Representation alignment refers to the degree to which different models, layers, or training conditions produce similar representations for the same inputs, with important implications for model interpretation, selection, and robustness analysis. Existing approaches to measure alignment primarily rely on geometric properties, such as neighborhood and cluster similarity, offering limited insight into the global organization of representations. In this work, we present TopoAlign, a topology-aware framework for visually comparing model representations from a structural perspective. Leveraging mapper graphs from topological data analysis, TopoAlign jointly analyzes graphs constructed from representations of shared inputs across different models or layers. The framework supports a top-down comparative workflow: it first performs global structure alignment via joint force-directed optimization to produce coordinated graph layouts; it then identifies local correspondences through automated detection of structurally matching regions, visualized with Bubble Sets; and finally it enables fine-grained pattern inspection through motif-based queries and membrane-inspired visualizations. We demonstrate TopoAlign through case studies on language and multimodal models, complemented by expert feedback. Our results show that TopoAlign provides meaningful insights into representation structure and alignment from a topological perspective.

Alex Fallin, Nathaniel Gorski, Tripti Agarwal et al.

Many scientific codes and instruments generate large amounts of floating-point data at high rates that must be compressed before they can be stored. Typically, only lossy compression algorithms deliver high-enough compression ratios. However, many of them provide only point-wise error bounds and do not preserve topological aspects of the data such as the relative magnitude of neighboring points. Even topology-preserving compressors tend to merely preserve some critical points and are generally slow. Our Local-Order-Preserving Compressor is the first to preserve the full local order (and thus all critical points), runs orders of magnitude faster than prior topology-preserving compressors, yields higher compression ratios than lossless compressors, and produces bit-for-bit the same output on CPUs and GPUs.

Brenda Praggastis, Davis Brown, Carlos Ortiz Marrero et al.

Deep neural networks used for image classification often use convolutional filters to extract distinguishing features before passing them to a linear classifier. Most interpretability literature focuses on providing semantic meaning to convolutional filters to explain a model's reasoning process and confirm its use of relevant information from the input domain. Fully connected layers can be studied by decomposing their weight matrices using a singular value decomposition, in effect studying the correlations between the rows in each matrix to discover the dynamics of the map. In this work we define a singular value decomposition for the weight tensor of a convolutional layer, which provides an analogous understanding of the correlations between filters, exposing the dynamics of the convolutional map. We validate our definition using recent results in random matrix theory. By applying the decomposition across the linear layers of an image classification network we suggest a framework against which interpretability methods might be applied using hypergraphs to model class separation. Rather than looking to the activations to explain the network, we use the singular vectors with the greatest corresponding singular values for each linear layer to identify those features most important to the network. We illustrate our approach with examples and introduce the DeepDataProfiler library, the analysis tool used for this study.

Wei Zhao, Shiqi Zhang, Bing Zhou et al.

Traffic forecasting is essential for the traffic construction of smart cities in the new era. However, traffic data's complex spatial and temporal dependencies make traffic forecasting extremely challenging. Most existing traffic forecasting methods rely on the predefined adjacency matrix to model the Spatio-temporal dependencies. Nevertheless, the road traffic state is highly real-time, so the adjacency matrix should change dynamically with time. This article presents a new Multi-Spatio-temporal Fusion Graph Recurrent Network (MSTFGRN) to address the issues above. The network proposes a data-driven weighted adjacency matrix generation method to compensate for real-time spatial dependencies not reflected by the predefined adjacency matrix. It also efficiently learns hidden Spatio-temporal dependencies by performing a new two-way Spatio-temporal fusion operation on parallel Spatio-temporal relations at different moments. Finally, global Spatio-temporal dependencies are captured simultaneously by integrating a global attention mechanism into the Spatio-temporal fusion module. Extensive trials on four large-scale, real-world traffic datasets demonstrate that our method achieves state-of-the-art performance compared to alternative baselines.

Wei Zhao, Shiqi Zhang, Bing Zhou et al.

Air pollution and carbon emissions caused by modern transportation are closely related to global climate change. With the help of next-generation information technology such as Internet of Things (IoT) and Artificial Intelligence (AI), accurate traffic flow prediction can effectively solve problems such as traffic congestion and mitigate environmental pollution and climate change. It further promotes the development of Intelligent Transportation Systems (ITS) and smart cities. However, the strong spatial and temporal correlation of traffic data makes the task of accurate traffic forecasting a significant challenge. Existing methods are usually based on graph neural networks using predefined spatial adjacency graphs of traffic networks to model spatial dependencies, ignoring the dynamic correlation of relationships between road nodes. In addition, they usually use independent Spatio-temporal components to capture Spatio-temporal dependencies and do not effectively model global Spatio-temporal dependencies. This paper proposes a new Spatio-temporal Causal Graph Attention Network (STCGAT) for traffic prediction to address the above challenges. In STCGAT, we use a node embedding approach that can adaptively generate spatial adjacency subgraphs at each time step without a priori geographic knowledge and fine-grained modeling of the topology of dynamically generated graphs for different time steps. Meanwhile, we propose an efficient causal temporal correlation component that contains node adaptive learning, graph convolution, and local and global causal temporal convolution modules to learn local and global Spatio-temporal dependencies jointly. Extensive experiments on four real, large traffic datasets show that our model consistently outperforms all baseline models.

Yuxiao Li, Mingze Xia, Xin Liang et al.

Scientific applications are generating unprecedented volumes of data that overwhelm storage and transmission systems, posing significant challenges for the design of data management tools and scientific databases. Lossy compression has emerged as a promising strategy to address this problem, but most existing compressors fail to preserve the topology of scientific data, leading to inaccuracies in downstream analyses and potentially erroneous scientific conclusions. In this work, we present a methodology for fully preserving the topology, specifically, Morse-Smale complexes (MSCs), in lossy-compressed 2D and 3D scalar field data from scientific simulations. We generalize the edit-based strategy introduced in MSz (a previous method that preserves only segmentations and cannot preserve saddles or separatrices) by extending the framework to the full MSCs, including all critical points and separatrices. Our approach corrects the MSCs in the decompressed output of any error-bounded lossy compressor (e.g., SZ3 or ZFP), referred to as the base compressor, using an iterative editing strategy that preserves all critical points and their connectivity via separatrices. During compression, we generate a sequence of quantized edits that are applied to the decompressed output, ensuring accurate preservation of topological features while maintaining the error within prescribed bounds. The strategy iteratively fixes critical points and separatrices in alternating steps until convergence is achieved in a finite number of iterations. To meet diverse application needs, our method offers flexible options that balance compression efficiency with feature preservation. To reduce computation time, we leverage GPU parallelism to accelerate each component of the workflow. Experiments on multiple datasets demonstrate that our method achieves 100% preservation of Morse-Smale complexes.

Mingwei Li, Suyang Li, Daisuke Sakurai et al.

Generative AI has demonstrated significant potential in creative design, enabling the rapid generation of visual content and imaginative concepts. Although deep AI models achieve effective featurization in the latent space, navigating the space remains a challenge. Current techniques, such as GANSlider and SliderSpace, use multiple sliders to generate high-dimensional vectors in generative AI's latent space. Despite applying (global) PCA to reduce the number of sliders, these approaches struggle with scalability and usability as the number of control dimensions increases. In this paper, we introduce LatentGandr, a visual analytics technique that facilitates latent space exploration by extracting locally linear dimensions from embeddings in high-dimensional latent spaces. By analyzing the topology and local curvature of the embeddings, LatentGandr automatically identifies local neighborhoods and computes their principal components using localized PCA. These local principal components are visualized as interactive image grids, allowing users to efficiently explore and control the generative process, providing an intuitive means to refine the generation of novel content and concepts. To evaluate the effectiveness of LatentGandr, we conducted a study comparing it to GANSlider, the current state-of-the-art visualization interface for generative AI models. The results offer insights into how localized exploration techniques can enhance user interaction with these models.

Mingze Xia, Yuxiao Li, Pu Jiao et al.

Scientific simulations and observations are producing vast amounts of time-varying vector field data, making it hard to store them for archival purposes and transmit them for analysis. Lossy compression is considered a promising approach to reducing these data because lossless compression yields low compression ratios that barely mitigate the problem. However, directly applying existing lossy compression methods to timevarying vector fields may introduce undesired distortions in critical-point trajectories, a crucial feature that encodes key properties of the vector field. In this work, we propose an efficient lossy compression framework that exactly preserves all critical-point trajectories in time-varying vector fields. Our contributions are threefold. First, we extend the theory for preserving critical points in space to preserving critical-point trajectories in space-time, and develop a compression framework to realize the functionality. Second, we propose a semi-Lagrange predictor to exploit the spatiotemporal correlations in advectiondominated regions, and combine it with the traditional Lorenzo predictor for improved compression efficiency. Third, we evaluate our method against state-of-the-art lossy and lossless compressors using four real-world scientific datasets. Experimental results demonstrate that the proposed method delivers up to 124.48X compression ratios while effectively preserving all critical-point trajectories. This compression ratio is up to 56.07X higher than that of the best lossless compressors, and none of the existing lossy compressors can preserve all critical-point trajectories at similar compression ratios.

Nathan Stringham, Fateme Hashemi Chaleshtori, Xinyuan Yan et al.

People use large language models (LLMs) when they should not. This is partly because they see LLMs compose poems and answer intricate questions, so they understandably, but incorrectly, assume LLMs won't stumble on basic tasks like simple arithmetic. Prior work has tried to address this by clustering instance embeddings into regions where an LLM is likely to fail and automatically describing patterns in these regions. The found failure patterns are taught to users to mitigate their overreliance. Yet, this approach has not fully succeeded. In this analysis paper, we aim to understand why. We first examine whether the negative result stems from the absence of failure patterns. We group instances in two datasets by their meta-labels and evaluate an LLM's predictions on these groups. We then define criteria to flag groups that are sizable and where the LLM is error-prone, and find meta-label groups that meet these criteria. Their meta-labels are the LLM's failure patterns that could be taught to users, so they do exist. We next test whether prompting and embedding-based approaches can surface these known failures. Without this, users cannot be taught about them to reduce their overreliance. We find mixed results across methods, which could explain the negative result. Finally, we revisit the final metric that measures teaching effectiveness. We propose to assess a user's ability to effectively use the given failure patterns to anticipate when an LLM is error-prone. A user study shows a positive effect from teaching with this metric, unlike the human-AI team accuracy. Our findings show that teaching failure patterns could be a viable approach to mitigating overreliance, but success depends on better automated failure-discovery methods and using metrics like ours.

Xiaojie Li, Bei Wang, Jianlong Wu et al.

The success of contrastive learning depends on the construction and utilization of high-quality positive pairs. However, current methods face critical limitations on two fronts: on the construction side, both handcrafted and generative augmentations often suffer from limited diversity and risk semantic corruption; on the learning side, the absence of a quality assessment mechanism leads to suboptimal supervision where all pairs are treated equally. To tackle these challenges, we propose GenView++, a unified framework that addresses both fronts by introducing two synergistic innovations. To improve pair construction, GenView++ introduces a multi-source adaptive view generation mechanism to synthesize diverse yet semantically coherent views by dynamically modulating generative parameters across image-conditioned, text-conditioned, and image-text-conditioned strategies. Second, a quality-driven contrastive learning mechanism assesses each pair's semantic alignment and diversity to dynamically reweight their training contribution, prioritizing high-quality pairs while suppressing redundant or misaligned pairs. Extensive experiments demonstrate the effectiveness of GenView++ across both vision and vision-language tasks. For vision representation learning, it improves MoCov2 by +2.5% on ImageNet linear classification. For vision-language learning, it raises the average zero-shot classification accuracy by +12.31% over CLIP and +5.31% over SLIP across ten datasets, and further improves Flickr30k text retrieval R@5 by +3.2%. The code is available at https://github.com/xiaojieli0903/GenViewPlusPlus.

Archit Rathore, Sunipa Dev, Jeff M. Phillips et al.

Word vector embeddings have been shown to contain and amplify biases in data they are extracted from. Consequently, many techniques have been proposed to identify, mitigate, and attenuate these biases in word representations. In this paper, we utilize interactive visualization to increase the interpretability and accessibility of a collection of state-of-the-art debiasing techniques. To aid this, we present Visualization of Embedding Representations for deBiasing system ("VERB"), an open-source web-based visualization tool that helps the users gain a technical understanding and visual intuition of the inner workings of debiasing techniques, with a focus on their geometric properties. In particular, VERB offers easy-to-follow use cases in exploring the effects of these debiasing techniques on the geometry of high-dimensional word vectors. To help understand how various debiasing techniques change the underlying geometry, VERB decomposes each technique into interpretable sequences of primitive transformations and highlights their effect on the word vectors using dimensionality reduction and interactive visual exploration. VERB is designed to target natural language processing (NLP) practitioners who are designing decision-making systems on top of word embeddings, and also researchers working with fairness and ethics of machine learning systems in NLP. It can also serve as a visual medium for education, which helps an NLP novice to understand and mitigate biases in word embeddings.

Xinyuan Yan, Shusen Liu, Kowshik Thopalli et al.

Sparse autoencoders (SAEs) have emerged as a powerful tool for uncovering interpretable features in large language models (LLMs) through the sparse directions they learn. However, the sheer number of extracted directions makes comprehensive exploration intractable. While conventional embedding techniques such as UMAP can reveal global structure, they suffer from limitations including high-dimensional compression artifacts, overplotting, and misleading neighborhood distortions. In this work, we propose a focused exploration framework that prioritizes curated concepts and their corresponding SAE features over attempts to visualize all available features simultaneously. We present an interactive visualization system that combines topology-based visual encoding with dimensionality reduction to faithfully represent both local and global relationships among selected features. This hybrid approach enables users to investigate SAE behavior through targeted, interpretable subsets, facilitating deeper and more nuanced analysis of concept representation in latent space.

Nathaniel Gorski, Shusen Liu, Bei Wang

Recent agentic systems demonstrate that large language models can generate scientific visualizations from natural language. However, reliability remains a major limitation: systems may execute invalid operations, introduce subtle but consequential errors, or fail to request missing information when inputs are underspecified. These issues are amplified in real-world workflows, which often exceed the complexity of standard benchmarks. Ensuring reliability in autonomous visualization pipelines therefore remains an open challenge. We present TopoPilot, a reliable and extensible agentic framework for automating complex scientific visualization workflows. TopoPilot incorporates systematic guardrails and verification mechanisms to ensure reliable operation. While we focus on topological data analysis and visualization as a primary use case, the framework is designed to generalize across visualization domains. TopoPilot adopts a reliability-centered two-agent architecture. An orchestrator agent translates user prompts into workflows composed of atomic backend actions, while a verifier agent evaluates these workflows prior to execution, enforcing structural validity and semantic consistency. This separation of interpretation and verification reduces code-generation errors and enforces correctness guarantees. A modular architecture further improves robustness by isolating components and enabling seamless integration of new descriptors and domain-specific workflows without modifying the core system. To systematically address reliability, we introduce a taxonomy of failure modes and implement targeted safeguards for each class. In evaluations simulating 1,000 multi-turn conversations across 100 prompts, including adversarial and infeasible requests, TopoPilot achieves a success rate exceeding 99%, compared to under 50% for baselines without comprehensive guardrails and checks.

Erin Wolf Chambers, Ishika Ghosh, Elizabeth Munch et al.

Mapper graphs are widely used tools in topological data analysis and visualization. They can be understood as discrete approximations of Reeb graphs, providing insight into the shape and connectivity of complex data. Given a high-dimensional point cloud together with a real-valued function defined on it, a mapper graph summarizes the induced topological structure: each node represents a local neighborhood, and edges connect nodes whose corresponding neighborhoods overlap. Our focus is the interleaving distance for mapper graphs, arising as a discretized analogue of the interleaving distance for Reeb graphs-a quantity known to be NP-hard to compute. This distance measures how similar two mapper graphs are by quantifying how much they must be ``stretched'' to be made comparable. Recent work introduced a loss function that gives an upper bound on this distance. The loss evaluates how far a given collection of maps, called an assignment, is from being a true interleaving. Importantly, it is computationally tractable, offering a practical way to bound the distance, however the quality of the bound is dependent on the choice of assignment. In this paper, we develop the first framework for bounding the interleaving distance on mapper graphs. We present the bound in two ways: first, by formulating an integer linear program (ILP) that determines whether an $n$-interleaving exists for a given $n$; and second, by constructing an ILP that identifies an assignment with minimal loss for that $n$. We also evaluate the method on small examples where the interleaving distance is known, and on benchmark and simulated datasets, demonstrating the utility of the approach for classification tasks based on mapper graphs.

Yuxiao Li, Mingze Xia, Xin Liang et al.

This paper introduces EXaCTz, a parallel algorithm that concurrently preserves extremum graphs and contour trees in lossy-compressed scalar field data. While error-bounded lossy compression is essential for large-scale scientific simulations and workflows, existing topology-preserving methods suffer from (1) a significant throughput disparity, where topology correction speeds are on the order of MB/s, lagging orders of magnitude behind compression speeds on the order of GB/s, (2) limited support for diverse topological descriptors, and (3) a lack of theoretical convergence bounds. To address these challenges, EXaCTz introduces a high-performance, bounded-iteration algorithm that enforces topological consistency by deriving targeted edits for decompressed data. Unlike prior methods that rely on explicit topology reconstruction, EXaCTz enforces consistent min/max neighbors of all vertices, along with global ordering among critical points. As such, the algorithm enforces consistent critical-point classification, saddle extremum connectivity, and the preservation of merge/split events. We theoretically prove the convergence of our algorithm, bounded by the longest path in a vulnerability graph that characterizes potential cascading effects during correction. Experiments on real-world datasets show that EXaCTz achieves a single-GPU throughput of up to 4.52 GB/s, outperforming the state-of-the-art contour-tree-preserving method (Gorski et al.) by up to 213x (with a single-core CPU implementation for fair comparison) and 3,285x (with a single-GPU version). In distributed environments, EXaCTz scales to 128 GPUs with 55.6\% efficiency (compared with 6.4\% for a naive parallelization), processing datasets of up to 512 GB in under 48 seconds and achieving an aggregate correction throughput of up to 32.69 GB/s.

Theodore Papamarkou, Tolga Birdal, Michael Bronstein et al.

Topological deep learning (TDL) is a rapidly evolving field that uses topological features to understand and design deep learning models. This paper posits that TDL is the new frontier for relational learning. TDL may complement graph representation learning and geometric deep learning by incorporating topological concepts, and can thus provide a natural choice for various machine learning settings. To this end, this paper discusses open problems in TDL, ranging from practical benefits to theoretical foundations. For each problem, it outlines potential solutions and future research opportunities. At the same time, this paper serves as an invitation to the scientific community to actively participate in TDL research to unlock the potential of this emerging field.

Pengfei Zuo, Huimin Lin, Junbo Deng et al.

The rapid evolution of large language models (LLMs), driven by growing parameter scales, adoption of mixture-of-experts (MoE) architectures, and expanding context lengths, imposes unprecedented demands on AI infrastructure. Traditional AI clusters face limitations in compute intensity, memory bandwidth, inter-chip communication, and latency, compounded by variable workloads and strict service-level objectives. Addressing these issues requires fundamentally redesigned hardware-software integration. This paper introduces Huawei CloudMatrix, a next-generation AI datacenter architecture, realized in the production-grade CloudMatrix384 supernode. It integrates 384 Ascend 910 NPUs and 192 Kunpeng CPUs interconnected via an ultra-high-bandwidth Unified Bus (UB) network, enabling direct all-to-all communication and dynamic pooling of resources. These features optimize performance for communication-intensive operations, such as large-scale MoE expert parallelism and distributed key-value cache access. To fully leverage CloudMatrix384, we propose CloudMatrix-Infer, an advanced LLM serving solution incorporating three core innovations: a peer-to-peer serving architecture that independently scales prefill, decode, and caching; a large-scale expert parallelism strategy supporting EP320 via efficient UB-based token dispatch; and hardware-aware optimizations including specialized operators, microbatch-based pipelining, and INT8 quantization. Evaluation with the DeepSeek-R1 model shows CloudMatrix-Infer achieves state-of-the-art efficiency: prefill throughput of 6,688 tokens/s per NPU and decode throughput of 1,943 tokens/s per NPU (<50 ms TPOT). It effectively balances throughput and latency, sustaining 538 tokens/s per NPU even under stringent 15 ms latency constraints, while INT8 quantization maintains model accuracy across benchmarks.

Zhichao Xu, Daniel Cohen, Bei Wang et al.

By allowing models to predict without task-specific training, in-context learning (ICL) with pretrained LLMs has enormous potential in NLP. However, a number of problems persist in ICL. In particular, its performance is sensitive to the choice and order of in-context examples. Given the same set of in-context examples with different orderings, model performance may vary between near random to near state-of-the-art. In this work, we formulate in-context example ordering as an optimization problem. We examine three problem settings that differ in the assumptions they make about what is known about the task. Inspired by the idea of learning from label proportions, we propose two principles for in-context example ordering guided by model's probability predictions. We apply our proposed principles to thirteen text classification datasets and nine different autoregressive LLMs with 700M to 13B parameters. We demonstrate that our approach outperforms the baselines by improving the classification accuracy, reducing model miscalibration, and also by selecting better in-context examples.

Xinyuan Yan, Xiwei Xuan, Jorge Piazentin Ono et al.

Real-world machine learning models require rigorous evaluation before deployment, especially in safety-critical domains like autonomous driving and surveillance. The evaluation of machine learning models often focuses on data slices, which are subsets of the data that share a set of characteristics. Data slice finding automatically identifies conditions or data subgroups where models underperform, aiding developers in mitigating performance issues. Despite its popularity and effectiveness, data slicing for vision model validation faces several challenges. First, data slicing often needs additional image metadata or visual concepts, and falls short in certain computer vision tasks, such as object detection. Second, understanding data slices is a labor-intensive and mentally demanding process that heavily relies on the expert's domain knowledge. Third, data slicing lacks a human-in-the-loop solution that allows experts to form hypothesis and test them interactively. To overcome these limitations and better support the machine learning operations lifecycle, we introduce VISLIX, a novel visual analytics framework that employs state-of-the-art foundation models to help domain experts analyze slices in computer vision models. Our approach does not require image metadata or visual concepts, automatically generates natural language insights, and allows users to test data slice hypothesis interactively. We evaluate VISLIX with an expert study and three use cases, that demonstrate the effectiveness of our tool in providing comprehensive insights for validating object detection models.

Xinyuan Yan, Rita Sevastjanova, Sinie van der Ben et al.

Large language models (LLMs) produce high-dimensional embeddings that capture rich semantic and syntactic relationships between words, sentences, and concepts. Investigating the topological structures of LLM embedding spaces via mapper graphs enables us to understand their underlying structures. Specifically, a mapper graph summarizes the topological structure of the embedding space, where each node represents a topological neighborhood (containing a cluster of embeddings), and an edge connects two nodes if their corresponding neighborhoods overlap. However, manually exploring these embedding spaces to uncover encoded linguistic properties requires considerable human effort. To address this challenge, we introduce a framework for semi-automatic annotation of these embedding properties. To organize the exploration process, we first define a taxonomy of explorable elements within a mapper graph such as nodes, edges, paths, components, and trajectories. The annotation of these elements is executed through two types of customizable LLM-based agents that employ perturbation techniques for scalable and automated analysis. These agents help to explore and explain the characteristics of mapper elements and verify the robustness of the generated explanations. We instantiate the framework within a visual analytics workspace and demonstrate its effectiveness through case studies. In particular, we replicate findings from prior research on BERT's embedding properties across various layers of its architecture and provide further observations into the linguistic properties of topological neighborhoods.

Tongxu Zhang, Bei Wang

High-fidelity 3D anatomical reconstruction is a prerequisite for downstream clinical tasks such as preoperative planning, radiotherapy target delineation, and orthopedic implant design. We present Med-PU, a knowledge-driven framework that integrates volumetric medical image segmentation with point cloud upsampling for accurate pelvic shape reconstruction. Unlike landmark- or PCA-based statistical shape models, Med-PU learns an implicit anatomical prior directly from large-scale 3D shape data, enabling dense completion and refinement from sparse segmentation-derived point sets. The pipeline couples SAM-Med3D-based voxel segmentation, point extraction, deep upsampling, and surface reconstruction, yielding smooth and topologically consistent meshes. We evaluate Med-PU on pelvic CT datasets (MedShapePelvic for training and Pelvic1k for validation), benchmarking against state-of-the-art upsampling methods using comprehensive geometry and surface metrics. Med-PU consistently improves surface quality and anatomical fidelity while reducing artifacts, demonstrating robustness across input densities. Although validated on the pelvis, the approach is anatomy-agnostic and applicable to other skeletal regions and organs. These results suggest Med-PU as a practical, generalizable tool to bridge segmentation outputs and clinically usable 3D models.

Tongxu Zhang, Bei Wang

In recent years, point cloud upsampling has been widely applied in tasks such as 3D reconstruction and object recognition. This study proposed a novel framework, ReLPU, which enhances upsampling performance by explicitly learning from both global and local structural features of point clouds. Specifically, we extracted global features from uniformly segmented inputs (Average Segments) and local features from patch-based inputs of the same point cloud. These two types of features were processed through parallel autoencoders, fused, and then fed into a shared decoder for upsampling. This dual-input design improved feature completeness and cross-scale consistency, especially in sparse and noisy regions. Our framework was applied to several state-of-the-art autoencoder-based networks and validated on standard datasets. Experimental results demonstrated consistent improvements in geometric fidelity and robustness. In addition, saliency maps confirmed that parallel global-local learning significantly enhanced the interpretability and performance of point cloud upsampling.

Mario Gómez, Guanqun Ma, Tom Needham et al.

We introduce a general framework for analyzing data modeled as parameterized families of networks. Building on a Gromov-Wasserstein variant of optimal transport, we define a family of parameterized Gromov-Wasserstein distances for comparing such parametric data, including time-varying metric spaces induced by collective motion, temporally evolving weighted social networks, and random graph models. We establish foundational properties of these distances, showing that they subsume several existing metrics in the literature, and derive theoretical approximation guarantees. In particular, we develop computationally tractable lower bounds and relate them to graph statistics commonly used in random graph theory. Furthermore, we prove that our distances can be consistently approximated in random graph and random metric space settings via empirical estimates from generative models. Finally, we demonstrate the practical utility of our framework through a series of numerical experiments.

Guanqun Ma, David Lenz, Hanqi Guo et al.

Implicit continuous models, such as functional models and implicit neural networks, are an increasingly popular method for replacing discrete data representations with continuous, high-order, and differentiable surrogates. These models offer new perspectives on the storage, transfer, and analysis of scientific data. In this paper, we introduce the first framework to directly extract complex topological features -- contours, Jacobi sets, and ridge-valley graphs -- from a type of continuous implicit model known as multivariate functional approximation (MFA). MFA replaces discrete data with continuous piecewise smooth functions. Given an MFA model as the input, our approach enables direct extraction of complex topological features from the model, without reverting to a discrete representation of the model. Our work is easily generalizable to any continuous implicit model that supports the queries of function values and high-order derivatives. Our work establishes the building blocks for performing topological data analysis and visualization on implicit continuous models.

Tongxu Zhang, Zhiming Liang, Bei Wang

Point clouds have become an increasingly important representation for 3D medical imaging, offering a compact, surface-preserving alternative to traditional voxel or mesh-based approaches. Recent advances in deep learning have enabled rapid progress in extracting, modeling, and analyzing anatomical shapes directly from point cloud data. This paper provides a comprehensive and systematic survey of learning-based shape analysis for medical point clouds, focusing on three fundamental tasks: registration, reconstruction, and variation modeling. We review recent literature from 2021 to 2025, summarize representative methods, datasets, and evaluation metrics, and highlight clinical applications and unique challenges in the medical domain. Key trends include the integration of hybrid representations, large-scale self-supervised models, and generative techniques. We also discuss current limitations, such as data scarcity, inter-patient variability, and the need for interpretable and robust solutions for clinical deployment. Finally, future directions are outlined for advancing point cloud-based shape learning in medical imaging.

Md Rahat-uz- Zaman, Bei Wang, Paul Rosen

Deep neural networks (DNNs) achieve state-of-the-art performance in many vision tasks, yet understanding their internal behavior remains challenging, particularly how different layers and activation channels contribute to class separability. We introduce ChannelExplorer, an interactive visual analytics tool for analyzing image-based outputs across model layers, emphasizing data-driven insights over architecture analysis for exploring class separability. ChannelExplorer summarizes activations across layers and visualizes them using three primary coordinated views: a Scatterplot View to reveal inter- and intra-class confusion, a Jaccard Similarity View to quantify activation overlap, and a Heatmap View to inspect activation channel patterns. Our technique supports diverse model architectures, including CNNs, GANs, ResNet and Stable Diffusion models. We demonstrate the capabilities of ChannelExplorer through four use-case scenarios: (1) generating class hierarchy in ImageNet, (2) finding mislabeled images, (3) identifying activation channel contributions, and(4) locating latent states' position in Stable Diffusion model. Finally, we evaluate the tool with expert users.

Fangfei Lan, Malin Ejdbo, Joachim Moeyens et al.

We introduce NEOviz, an interactive visualization system designed to assist planetary defense experts in the visual analysis of the movements of near-Earth objects in the Solar System that might prove hazardous to Earth. Asteroids are often discovered using optical telescopes and their trajectories are calculated from images, resulting in an inherent asymmetric uncertainty in their position and velocity. Consequently, we typically cannot determine the exact trajectory of an asteroid, and an ensemble of trajectories must be generated to estimate an asteroid's movement over time. When propagating these ensembles over decades, it is challenging to visualize the varying paths and determine their potential impact on Earth, which could cause catastrophic damage. NEOviz equips experts with the necessary tools to effectively analyze the existing catalog of asteroid observations. In particular, we present a novel approach for visualizing the 3D uncertainty region through which an asteroid travels, while providing accurate spatial context in relation to system-critical infrastructure such as Earth, the Moon, and artificial satellites. Furthermore, we use NEOviz to visualize the divergence of asteroid trajectories, capturing high-variance events in an asteroid's orbital properties. For potential impactors, we combine the 3D visualization with an uncertainty-aware impact map to illustrate the potential risks to human populations. NEOviz was developed with continuous input from members of the planetary defense community through a participatory design process. It is exemplified in three real-world use cases and evaluated via expert feedback interviews.

Tongxu Zhang, Bei Wang

In recent years, multitudes of researches have applied deep learning to automatic sleep stage classification. Whereas actually, these works have paid less attention to the issue of cross-subject in sleep staging. At the same time, emerging neuroscience theories on inter-subject correlations can provide new insights for cross-subject analysis. This paper presents the MViTime model that have been used in sleep staging study. And we implement the inter-subject correlation theory through contrastive learning, providing a feasible solution to address the cross-subject problem in sleep stage classification. Finally, experimental results and conclusions are presented, demonstrating that the developed method has achieved state-of-the-art performance on sleep staging. The results of the ablation experiment also demonstrate the effectiveness of the cross-subject approach based on contrastive learning.

Lin Yan, Talha Bin Masood, Farhan Rasheed et al.

Merge trees, a type of topological descriptor, serve to identify and summarize the topological characteristics associated with scalar fields. They present a great potential for the analysis and visualization of time-varying data. First, they give compressed and topology-preserving representations of data instances. Second, their comparisons provide a basis for studying the relations among data instances, such as their distributions, clusters, outliers, and periodicities. A number of comparative measures have been developed for merge trees. However, these measures are often computationally expensive since they implicitly consider all possible correspondences between critical points of the merge trees. In this paper, we perform geometry-aware comparisons of merge trees using labeled interleaving distances. The main idea is to decouple the computation of a comparative measure into two steps: a labeling step that generates a correspondence between the critical points of two merge trees, and a comparison step that computes distances between a pair of labeled merge trees by encoding them as matrices. We show that our approach is general, computationally efficient, and practically useful. Our general framework makes it possible to integrate geometric information of the data domain in the labeling process. At the same time, it reduces the computational complexity since not all possible correspondences have to be considered. We demonstrate via experiments that such geometry-aware merge tree comparisons help to detect transitions, clusters, and periodicities of time-varying datasets, as well as to diagnose and highlight the topological changes between adjacent data instances.

Youjia Zhou, Methun Kamruzzaman, Patrick Schnable et al.

High-throughput technologies to collect field data have made observations possible at scale in several branches of life sciences. The data collected can range from the molecular level (genotypes) to physiological (phenotypic traits) and environmental observations (e.g., weather, soil conditions). These vast swathes of data, collectively referred to as phenomics data, represent a treasure trove of key scientific knowledge on the dynamics of the underlying biological system. However, extracting information and insights from these complex datasets remains a significant challenge owing to their multidimensionality and lack of prior knowledge about their complex structure. In this paper, we present Pheno-Mapper, an interactive toolbox for the exploratory analysis and visualization of large-scale phenomics data. Our approach uses the mapper framework to perform a topological analysis of the data, and subsequently render visual representations with built-in data analysis and machine learning capabilities. We demonstrate the utility of this new tool on real-world plant (e.g., maize) phenomics datasets. In comparison to existing approaches, the main advantage of Pheno-Mapper is that it provides rich, interactive capabilities in the exploratory analysis of phenomics data, and it integrates visual analytics with data analysis and machine learning in an easily extensible way. In particular, Pheno-Mapper allows the interactive selection of subpopulations guided by a topological summary of the data and applies data mining and machine learning to these selected subpopulations for in-depth exploration.

Lin Yan, Talha Bin Masood, Raghavendra Sridharamurthy et al.

In topological data analysis and visualization, topological descriptors such as persistence diagrams, merge trees, contour trees, Reeb graphs, and Morse-Smale complexes play an essential role in capturing the shape of scalar field data. We present a state-of-the-art report on scalar field comparison using topological descriptors. We provide a taxonomy of existing approaches based on visualization tasks associated with three categories of data: single fields, time-varying fields, and ensembles. These tasks include symmetry detection, periodicity detection, key event/feature detection, feature tracking, clustering, and structure statistics. Our main contributions include the formulation of a set of desirable mathematical and computational properties of comparative measures, and the classification of visualization tasks and applications that are enabled by these measures.

Fangfei Lan, Michael Young, Lauren Anderson et al.

We present a state-of-the-art report on visualization in astrophysics. We survey representative papers from both astrophysics and visualization and provide a taxonomy of existing approaches based on data analysis tasks. The approaches are classified based on five categories: data wrangling, data exploration, feature identification, object reconstruction, as well as education and outreach. Our unique contribution is to combine the diverse viewpoints from both astronomers and visualization experts to identify challenges and opportunities for visualization in astrophysics. The main goal is to provide a reference point to bring modern data analysis and visualization techniques to the rich datasets in astrophysics.

Youjia Zhou, Nathaniel Saul, Ilkin Safarli et al.

The mapper construction is a powerful tool from topological data analysis that is designed for the analysis and visualization of multivariate data. In this paper, we investigate a method for stitching a pair of univariate mappers together into a bivariate mapper, and study topological notions of information gains, referred to as topological gains, during such a process. We further provide implementations that visualize such topological gains for mapper graphs.

Youjia Zhou, Archit Rathore, Emilie Purvine et al.

We study hypergraph visualization via its topological simplification. We explore both vertex simplification and hyperedge simplification of hypergraphs using tools from topological data analysis. In particular, we transform a hypergraph to its graph representations known as the line graph and clique expansion. A topological simplification of such a graph representation induces a simplification of the hypergraph. In simplifying a hypergraph, we allow vertices to be combined if they belong to almost the same set of hyperedges, and hyperedges to be merged if they share almost the same set of vertices. Our proposed approaches are general, mathematically justifiable, and they put vertex simplification and hyperedge simplification in a unifying framework.

Zeyu Wang, Sheng Huang, Zhongxin Liu et al.

Plot-based Graphic API recommendation (Plot2API) is an unstudied but meaningful issue, which has several important applications in the context of software engineering and data visualization, such as the plotting guidance of the beginner, graphic API correlation analysis, and code conversion for plotting. Plot2API is a very challenging task, since each plot is often associated with multiple APIs and the appearances of the graphics drawn by the same API can be extremely varied due to the different settings of the parameters. Additionally, the samples of different APIs also suffer from extremely imbalanced. Considering the lack of technologies in Plot2API, we present a novel deep multi-task learning approach named Semantic Parsing Guided Neural Network (SPGNN) which translates the Plot2API issue as a multi-label image classification and an image semantic parsing tasks for the solution. In SPGNN, the recently advanced Convolutional Neural Network (CNN) named EfficientNet is employed as the backbone network for API recommendation. Meanwhile, a semantic parsing module is complemented to exploit the semantic relevant visual information in feature learning and eliminate the appearance-relevant visual information which may confuse the visual-information-based API recommendation. Moreover, the recent data augmentation technique named random erasing is also applied for alleviating the imbalance of API categories. We collect plots with the graphic APIs used to drawn them from Stack Overflow, and release three new Plot2API datasets corresponding to the graphic APIs of R and Python programming languages for evaluating the effectiveness of Plot2API techniques. Extensive experimental results not only demonstrate the superiority of our method over the recent deep learning baselines but also show the practicability of our method in the recommendation of graphic APIs.

Mingzhe Li, Sourabh Palande, Lin Yan et al.

Merge trees are a type of topological descriptors that record the connectivity among the sublevel sets of scalar fields. They are among the most widely used topological tools in visualization. In this paper, we are interested in sketching a set of merge trees. That is, given a large set T of merge trees, we would like to find a much smaller basis set S such that each tree in T can be approximately reconstructed from a linear combination of merge trees in S. A set of high-dimensional vectors can be sketched via matrix sketching techniques such as principal component analysis and column subset selection. However, up until now, topological descriptors such as merge trees have not been known to be sketchable. We develop a framework for sketching a set of merge trees that combines the Gromov-Wasserstein probabilistic matching with techniques from matrix sketching. We demonstrate the applications of our framework in sketching merge trees that arise from time-varying scientific simulations. Specifically, our framework obtains a much smaller representation of a large set of merge trees for downstream analysis and visualization. It is shown to be useful in identifying good representatives and outliers with respect to a chosen basis. Finally, our work shows a promising direction of utilizing randomized linear algebra within scientific visualization.

Avishan Bagherinezhad, Michael Young, Bei Wang et al.

The high penetration of transportation electrification and its associated charging requirements magnify the interdependency of the transportation and power distribution systems. The emergent interdependency requires that system operators fully understand the status of both systems. To this end, a visualization tool is presented to illustrate the interdependency of battery bus transit and power distribution systems and the associated components. The tool aims at monitoring components from both systems, such as the locations of electric buses, the state of charge of batteries, the price of electricity, voltage, current, and active/reactive power flow. The results showcase the success of the visualization tool in monitoring the bus transit and power distribution components to determine a reliable cost-effective scheme for spatio-temporal charging of electric buses.

Youjia Zhou, Nithin Chalapathi, Archit Rathore et al.

The mapper algorithm is a popular tool from topological data analysis for extracting topological summaries of high-dimensional datasets. In this paper, we present Mapper Interactive, a web-based framework for the interactive analysis and visualization of high-dimensional point cloud data. It implements the mapper algorithm in an interactive, scalable, and easily extendable way, thus supporting practical data analysis. In particular, its command-line API can compute mapper graphs for 1 million points of 256 dimensions in about 3 minutes (4 times faster than the vanilla implementation). Its visual interface allows on-the-fly computation and manipulation of the mapper graph based on user-specified parameters and supports the addition of new analysis modules with a few lines of code. Mapper Interactive makes the mapper algorithm accessible to nonspecialists and accelerates topological analytics workflows.

Ilkin Safarli, Youjia Zhou, Bei Wang

Applying machine learning techniques to graph drawing has become an emergent area of research in visualization. In this paper, we interpret graph drawing as a multi-agent reinforcement learning (MARL) problem. We first demonstrate that a large number of classic graph drawing algorithms, including force-directed layouts and stress majorization, can be interpreted within the framework of MARL. Using this interpretation, a node in the graph is assigned to an agent with a reward function. Via multi-agent reward maximization, we obtain an aesthetically pleasing graph layout that is comparable to the outputs of classic algorithms. The main strength of a MARL framework for graph drawing is that it not only unifies a number of classic drawing algorithms in a general formulation but also supports the creation of novel graph drawing algorithms by introducing a diverse set of reward functions.

Bei Wang, Jianping An

This paper addresses the importance of full-image supervision for monocular depth estimation. We propose a semi-supervised architecture, which combines both unsupervised framework of using image consistency and supervised framework of dense depth completion. The latter provides full-image depth as supervision for the former. Ego-motion from navigation system is also embedded into the unsupervised framework as output supervision of an inner temporal transform network, making monocular depth estimation better. In the evaluation, we show that our proposed model outperforms other approaches on depth estimation.

Xiaojuan Dong, Weiming Zhang, Mohsin Shah et al.

The modified Paillier cryptosystem has become extremely popular and applied in many fields, owning to its additive homomorphism. This cryptosystem provides weak private keys and a strong private key. A weak private key only can decrypt ciphertexts under the corresponding public key. The strong private key can decrypt all ciphertexts even under different public keys. When the modified Paillier cryptosystem is applied in a system, the member, often the system administrator, has the strong private key and can decrypt all ciphertexts. If this system administrator is attacked or compromised, the security of the application system absolutely break down. Thus, it is important to stop the decryption of the strong private key. To address this issue, we propose an restrained version of the modified Paillier cryptosystem (Restrained-Paillier), by endowing the multiplicative homomorphism. We perform the additive encryption on the multiplicative ciphertext and generate the mixed ciphertext, which can not be decrypted by the strong private key. Based on this Restrained-Paillier, we develop two applications. Firstly, we realize access control of common secret of two owners. In our scheme, only one owner cannot access secret. Secondly, we present three protocols for identity distribution and key management, identity authentication and private key recovery. Security analysis shows that the Restrained-Paillier cryptosystem can resist the chosen plaintext attack. The experimental results illustrate the utility and efficiency of the proposed protocols.

Archit Rathore, Nithin Chalapathi, Sourabh Palande et al.

Deep neural networks such as GoogLeNet, ResNet, and BERT have achieved impressive performance in tasks such as image and text classification. To understand how such performance is achieved, we probe a trained deep neural network by studying neuron activations, i.e., combinations of neuron firings, at various layers of the network in response to a particular input. With a large number of inputs, we aim to obtain a global view of what neurons detect by studying their activations. In particular, we develop visualizations that show the shape of the activation space, the organizational principle behind neuron activations, and the relationships of these activations within a layer. Applying tools from topological data analysis, we present TopoAct, a visual exploration system to study topological summaries of activation vectors. We present exploration scenarios using TopoAct that provide valuable insights into learned representations of neural networks. We expect TopoAct to give a topological perspective that enriches the current toolbox of neural network analysis, and to provide a basis for network architecture diagnosis and data anomaly detection.