6.5CVAug 30, 2022
Machine learning in the prediction of cardiac epicardial and mediastinal fat volumesÉ. O. Rodrigues, V. H. A. Pinheiro, P. Liatsis et al.
We propose a methodology to predict the cardiac epicardial and mediastinal fat volumes in computed tomography images using regression algorithms. The obtained results indicate that it is feasible to predict these fats with a high degree of correlation, thus alleviating the requirement for manual or automatic segmentation of both fat volumes. Instead, segmenting just one of them suffices, while the volume of the other may be predicted fairly precisely. The correlation coefficient obtained by the Rotation Forest algorithm using MLP Regressor for predicting the mediastinal fat based on the epicardial fat was 0.9876, with a relative absolute error of 14.4% and a root relative squared error of 15.7%. The best correlation coefficient obtained in the prediction of the epicardial fat based on the mediastinal was 0.9683 with a relative absolute error of 19.6% and a relative squared error of 24.9%. Moreover, we analysed the feasibility of using linear regressors, which provide an intuitive interpretation of the underlying approximations. In this case, the obtained correlation coefficient was 0.9534 for predicting the mediastinal fat based on the epicardial, with a relative absolute error of 31.6% and a root relative squared error of 30.1%. On the prediction of the epicardial fat based on the mediastinal fat, the correlation coefficient was 0.8531, with a relative absolute error of 50.43% and a root relative squared error of 52.06%. In summary, it is possible to speed up general medical analyses and some segmentation and quantification methods that are currently employed in the state-of-the-art by using this prediction approach, which consequently reduces costs and therefore enables preventive treatments that may lead to a reduction of health problems.
k-MS: A novel clustering algorithm based on morphological reconstructionÉ. O. Rodrigues, L. Torok, P. Liatsis et al.
This work proposes a clusterization algorithm called k-Morphological Sets (k-MS), based on morphological reconstruction and heuristics. k-MS is faster than the CPU-parallel k-Means in worst case scenarios and produces enhanced visualizations of the dataset as well as very distinct clusterizations. It is also faster than similar clusterization methods that are sensitive to density and shapes such as Mitosis and TRICLUST. In addition, k-MS is deterministic and has an intrinsic sense of maximal clusters that can be created for a given input sample and input parameters, differing from k-Means and other clusterization algorithms. In other words, given a constant k, a structuring element and a dataset, k-MS produces k or less clusters without using random/ pseudo-random functions. Finally, the proposed algorithm also provides a straightforward means for removing noise from images or datasets in general.
13.7IVAug 30, 2022
Comparing Results of Thermographic Images Based Diagnosis for Breast DiseasesE. O. Rodrigues, A. Conci, T. B. Borchartt et al.
This paper examines the potential contribution of infrared (IR) imaging in breast diseases detection. It compares obtained results using some algorithms for detection of malignant breast conditions such as Support Vector Machine (SVM) regarding the consistency of different approaches when applied to public data. Moreover, in order to avail the actual IR imaging's capability as a complement on clinical trials and to promote researches using high-resolution IR imaging we deemed the use of a public database revised by confidently trained breast physicians as essential. Only the static acquisition protocol is regarded in our work. We used lO2 IR single breast images from the Pro Engenharia (PROENG) public database (54 normal and 48 with some finding). These images were collected from Universidade Federal de Pernambuco (UFPE) University's Hospital. We employed the same features proposed by the authors of the work that presented the best results and achieved an accuracy of 61.7 % and Youden index of 0.24 using the Sequential Minimal Optimization (SMO) classifier.
8.1IVAug 30, 2022
Automated recognition of the pericardium contour on processed CT images using genetic algorithmsE. O. Rodrigues, L. O. Rodrigues, L. S. N. Oliveira et al.
This work proposes the use of Genetic Algorithms (GA) in tracing and recognizing the pericardium contour of the human heart using Computed Tomography (CT) images. We assume that each slice of the pericardium can be modelled by an ellipse, the parameters of which need to be optimally determined. An optimal ellipse would be one that closely follows the pericardium contour and, consequently, separates appropriately the epicardial and mediastinal fats of the human heart. Tracing and automatically identifying the pericardium contour aids in medical diagnosis. Usually, this process is done manually or not done at all due to the effort required. Besides, detecting the pericardium may improve previously proposed automated methodologies that separate the two types of fat associated to the human heart. Quantification of these fats provides important health risk marker information, as they are associated with the development of certain cardiovascular pathologies. Finally, we conclude that GA offers satisfiable solutions in a feasible amount of processing time.
4.8IVAug 30, 2022
On the Automated Segmentation of Epicardial and Mediastinal Cardiac Adipose Tissues Using Classification AlgorithmsÉrick Oliveira Rodrigues, Felipe Fernandes Cordeiro de Morais, Aura Conci
The quantification of fat depots on the surroundings of the heart is an accurate procedure for evaluating health risk factors correlated with several diseases. However, this type of evaluation is not widely employed in clinical practice due to the required human workload. This work proposes a novel technique for the automatic segmentation of cardiac fat pads. The technique is based on applying classification algorithms to the segmentation of cardiac CT images. Furthermore, we extensively evaluate the performance of several algorithms on this task and discuss which provided better predictive models. Experimental results have shown that the mean accuracy for the classification of epicardial and mediastinal fats has been 98.4% with a mean true positive rate of 96.2%. On average, the Dice similarity index, regarding the segmented patients and the ground truth, was equal to 96.8%. Therfore, our technique has achieved the most accurate results for the automatic segmentation of cardiac fats, to date.
2.8CVJul 11, 2023
Line Art Colorization of Fakemon using Generative Adversarial Neural NetworksErick Oliveira Rodrigues, Esteban Clua, Giovani Bernardes Vitor
This work proposes a complete methodology to colorize images of Fakemon, anime-style monster-like creatures. In addition, we propose algorithms to extract the line art from colorized images as well as to extract color hints. Our work is the first in the literature to use automatic color hint extraction, to train the networks specifically with anime-styled creatures and to combine the Pix2Pix and CycleGAN approaches, two different generative adversarial networks that create a single final result. Visual results of the colorizations are feasible but there is still room for improvement.
6.5CVMay 29
Mathematical Morphology in Machine LearningErick Oliveira Rodrigues, Aura Conci
This work introduces mathematical morphology-an established visual computing theory-into machine learning to exploit shape and density aspects often overlooked by standard techniques. We propose a fast clustering algorithm based on morphological reconstruction that accurately preserves cluster shapes and density. This scheme offers unique features: an intrinsic sense of maximal clusters, cost-free noise removal, and diverse growth patterns controlled by structuring elements.Additionally, we propose a novel distance metric combining Minkowski and Chebyshev distances, highly efficient for morphological dilations. In $Z^2$ discrete neighbourhood iterations, it is roughly 1.3 times faster than Manhattan and 329.5 times faster than Euclidean distances. When evaluated using a k-Nearest Neighbours (k-NN) classifier across 33 UCI datasets against 14 other distances, our metric achieved above-average accuracies most frequently (26 of 33 cases) and the best overall accuracy in 9 cases.Finally, we introduce novel morphological classifiers. Unlike current literature, this proposal uniquely models shape, density, and fractal information in datasets.
3.0IVAug 30, 2023Code
Software multiplataforma para a segmentação de vasos sanguíneos em imagens da retinaJoão Henrique Pereira Machado, Gilson Adamczuk Oliveira, Érick Oliveira Rodrigues
In this work, we utilize image segmentation to visually identify blood vessels in retinal examination images. This process is typically carried out manually. However, we can employ heuristic methods and machine learning to automate or at least expedite the process. In this context, we propose a cross-platform, open-source, and responsive software that allows users to manually segment a retinal image. The purpose is to use the user-segmented image to retrain machine learning algorithms, thereby enhancing future automated segmentation results. Moreover, the software also incorporates and applies certain image filters established in the literature to improve vessel visualization. We propose the first solution of this kind in the literature. This is the inaugural integrated software that embodies the aforementioned attributes: open-source, responsive, and cross-platform. It offers a comprehensive solution encompassing manual vessel segmentation, as well as the automated execution of classification algorithms to refine predictive models.
2.6LGOct 25, 2024
Water and Electricity Consumption Forecasting at an Educational Institution using Machine Learning models with Metaheuristic OptimizationEduardo Luiz Alba, Matheus Henrique Dal Molin Ribeiro, Gilson Adamczuk et al.
Educational institutions are essential for economic and social development. Budget cuts in Brazil in recent years have made it difficult to carry out their activities and projects. In the case of expenses with water and electricity, unexpected situations can occur, such as leaks and equipment failures, which make their management challenging. This study proposes a comparison between two machine learning models, Random Forest (RF) and Support Vector Regression (SVR), for water and electricity consumption forecasting at the Federal Institute of Paraná-Campus Palmas, with a 12-month forecasting horizon, as well as evaluating the influence of the application of climatic variables as exogenous features. The data were collected over the past five years, combining details pertaining to invoices with exogenous and endogenous variables. The two models had their hyperpa-rameters optimized using the Genetic Algorithm (GA) to select the individuals with the best fitness to perform the forecasting with and without climatic variables. The absolute percentage errors and root mean squared error were used as performance measures to evaluate the forecasting accuracy. The results suggest that in forecasting water and electricity consumption over a 12-step horizon, the Random Forest model exhibited the most superior performance. The integration of climatic variables often led to diminished forecasting accuracy, resulting in higher errors. Both models still had certain difficulties in predicting water consumption, indicating that new studies with different models or variables are welcome.
1.5CVAug 31, 2023
Segmentação e contagem de troncos de madeira utilizando deep learning e processamento de imagensJoão V. C. Mazzochin, Gustavo Tiecker, Erick O. Rodrigues
Counting objects in images is a pattern recognition problem that focuses on identifying an element to determine its incidence and is approached in the literature as Visual Object Counting (VOC). In this work, we propose a methodology to count wood logs. First, wood logs are segmented from the image background. This first segmentation step is obtained using the Pix2Pix framework that implements Conditional Generative Adversarial Networks (CGANs). Second, the clusters are counted using Connected Components. The average accuracy of the segmentation exceeds 89% while the average amount of wood logs identified based on total accounted is over 97%.
13.7IVDec 21, 2021
A novel approach for the automated segmentation and volume quantification of cardiac fats on computed tomographyÉrick Oliveira Rodrigues, FFC Morais, NAOS Morais et al.
The deposits of fat on the surroundings of the heart are correlated to several health risk factors such as atherosclerosis, carotid stiffness, coronary artery calcification, atrial fibrillation and many others. These deposits vary unrelated to obesity, which reinforces its direct segmentation for further quantification. However, manual segmentation of these fats has not been widely deployed in clinical practice due to the required human workload and consequential high cost of physicians and technicians. In this work, we propose a unified method for an autonomous segmentation and quantification of two types of cardiac fats. The segmented fats are termed epicardial and mediastinal, and stand apart from each other by the pericardium. Much effort was devoted to achieve minimal user intervention. The proposed methodology mainly comprises registration and classification algorithms to perform the desired segmentation. We compare the performance of several classification algorithms on this task, including neural networks, probabilistic models and decision tree algorithms. Experimental results of the proposed methodology have shown that the mean accuracy regarding both epicardial and mediastinal fats is 98.5% (99.5% if the features are normalized), with a mean true positive rate of 98.0%. In average, the Dice similarity index was equal to 97.6%.
9.9LGDec 21, 2021
Morphological classifiersÉ. O. Rodrigues, A. Conci, P. Liatsis
This work proposes a new type of classifier called Morphological Classifier (MC). MCs aggregate concepts from mathematical morphology and supervised learning. The outcomes of this aggregation are classifiers that may preserve shape characteristics of classes, subject to the choice of a stopping criterion and structuring element. MCs are fundamentally based on set theory, and their classification model can be a mathematical set itself. Two types of morphological classifiers are proposed in the current work, namely, Morphological k-NN (MkNN) and Morphological Dilation Classifier (MDC), which demonstrate the feasibility of the approach. This work provides evidence regarding the advantages of MCs, e.g., very fast classification times as well as competitive accuracy rates. The performance of MkNN and MDC was tested using p -dimensional datasets. MCs tied or outperformed 14 well established classifiers in 5 out of 8 datasets. In all occasions, the obtained accuracies were higher than the average accuracy obtained with all classifiers. Moreover, the proposed implementations utilize the power of the Graphics Processing Units (GPUs) to speed up processing.
9.9LGDec 21, 2021
Combining Minkowski and Chebyshev: New distance proposal and survey of distance metrics using k-nearest neighbours classifierÉrick Oliveira Rodrigues
This work proposes a distance that combines Minkowski and Chebyshev distances and can be seen as an intermediary distance. This combination not only achieves efficient run times in neighbourhood iteration tasks in Z^2, but also obtains good accuracies when coupled with the k-Nearest Neighbours (k-NN) classifier. The proposed distance is approximately 1.3 times faster than Manhattan distance and 329.5 times faster than Euclidean distance in discrete neighbourhood iterations. An accuracy analysis of the k-NN classifier using a total of 33 datasets from the UCI repository, 15 distances and values assigned to k that vary from 1 to 200 is presented. In this experiment, the proposed distance obtained accuracies that were better than the average more often than its counterparts (in 26 cases out of 33), and also obtained the best accuracy more frequently (in 9 out of 33 cases).
5.8HCJun 27, 2020
Automatic Recommendation of Strategies for Minimizing Discomfort in Virtual EnvironmentsThiago Porcino, Esteban Clua, Daniela Trevisan et al.
Virtual reality (VR) is an imminent trend in games, education, entertainment, military, and health applications, as the use of head-mounted displays is becoming accessible to the mass market. Virtual reality provides immersive experiences but still does not offer an entirely perfect situation, mainly due to Cybersickness (CS) issues. In this work, we first present a detailed review about possible causes of CS. Following, we propose a novel CS prediction solution. Our system is able to suggest if the user may be entering in the next moments of the application into an illness situation. We use Random Forest classifiers, based on a dataset we have produced. The CSPQ (Cybersickness Profile Questionnaire) is also proposed, which is used to identify the player's susceptibility to CS and the dataset construction. In addition, we designed two immersive environments for empirical studies where participants are asked to complete the questionnaire and describe (orally) the degree of discomfort during their gaming experience. Our data was achieved through 84 individuals on different days, using VR devices. Our proposal also allows us to identify which are the most frequent attributes (causes) in the observed discomfort situations.