Avgoustinos Vouros

Avgoustinos Vouros, Eleni Vasilaki

We consider the problem of data clustering with unidentified feature quality and when a small amount of labelled data is provided. An unsupervised sparse clustering method can be employed in order to detect the subgroup of features necessary for clustering and a semi-supervised method can use the labelled data to create constraints and enhance the clustering solution. In this paper we propose a K-Means variant that employs these techniques. We show that the algorithm maintains the high performance of other semi-supervised algorithms and in addition preserves the ability to identify informative from uninformative features. We examine the performance of the algorithm on synthetic and real world data sets. We use scenarios of different number and types of constraints as well as different clustering initialisation methods.

Avgoustinos Vouros, Stephen Langdell, Mike Croucher et al.

K-Means is one of the most used algorithms for data clustering and the usual clustering method for benchmarking. Despite its wide application it is well-known that it suffers from a series of disadvantages; it is only able to find local minima and the positions of the initial clustering centres (centroids) can greatly affect the clustering solution. Over the years many K-Means variations and initialisation techniques have been proposed with different degrees of complexity. In this study we focus on common K-Means variations along with a range of deterministic and stochastic initialisation techniques. We show that, on average, more sophisticated initialisation techniques alleviate the need for complex clustering methods. Furthermore, deterministic methods perform better than stochastic methods. However, there is a trade-off: less sophisticated stochastic methods, executed multiple times, can result in better clustering. Factoring in execution time, deterministic methods can be competitive and result in a good clustering solution. These conclusions are obtained through extensive benchmarking using a range of synthetic model generators and real-world data sets.

Avgoustinos Vouros, Tiago V. Gehring, Kinga Szydlowska et al.

The Morris Water Maze is commonly used in behavioural neuroscience for the study of spatial learning with rodents. Over the years, various methods of analysing rodent data collected in this task have been proposed. These methods span from classical performance measurements (e.g. escape latency, rodent speed, quadrant preference) to more sophisticated methods of categorisation which classify the animal swimming path into behavioural classes known as strategies. Classification techniques provide additional insight in relation to the actual animal behaviours but still only a limited amount of studies utilise them mainly because they highly depend on machine learning knowledge. We have previously demonstrated that the animals implement various strategies and by classifying whole trajectories can lead to the loss of important information. In this work, we developed a generalised and robust classification methodology which implements majority voting to boost the classification performance and successfully nullify the need of manual tuning. Based on this framework, we built a complete software, capable of performing the full analysis described in this paper. The software provides an easy to use graphical user interface (GUI) through which users can enter their trajectory data, segment and label them and finally generate reports and figures of the results.