Gongbo Liang

Gongbo Liang, Jesus Guerrero, Izzat Alsmadi

Neural text detectors aim to decide the characteristics that distinguish neural (machine-generated) from human texts. To challenge such detectors, adversarial attacks can alter the statistical characteristics of the generated text, making the detection task more and more difficult. Inspired by the advances of mutation analysis in software development and testing, in this paper, we propose character- and word-based mutation operators for generating adversarial samples to attack state-of-the-art natural text detectors. This falls under white-box adversarial attacks. In such attacks, attackers have access to the original text and create mutation instances based on this original text. The ultimate goal is to confuse machine learning models and classifiers and decrease their prediction accuracy.

Jesus Guerrero, Gongbo Liang, Izzat Alsmadi

Many natural language related applications involve text generation, created by humans or machines. While in many of those applications machines support humans, yet in few others, (e.g. adversarial machine learning, social bots and trolls) machines try to impersonate humans. In this scope, we proposed and evaluated several mutation-based text generation approaches. Unlike machine-based generated text, mutation-based generated text needs human text samples as inputs. We showed examples of mutation operators but this work can be extended in many aspects such as proposing new text-based mutation operators based on the nature of the application.

Ahmad Elallaf, Nathan Jacobs, Xinyue Ye et al.

Roadway traffic accidents represent a global health crisis, responsible for over a million deaths annually and costing many countries up to 3% of their GDP. Traditional traffic safety studies often examine risk factors in isolation, overlooking the spatial complexity and contextual interactions inherent in the built environment. Furthermore, conventional Neural Network-based risk estimators typically generate point estimates without conveying model uncertainty, limiting their utility in critical decision-making. To address these shortcomings, we introduce a novel geospatial deep learning framework that leverages satellite imagery as a comprehensive spatial input. This approach enables the model to capture the nuanced spatial patterns and embedded environmental risk factors that contribute to fatal crash risks. Rather than producing a single deterministic output, our model estimates a full Beta probability distribution over fatal crash risk, yielding accurate and uncertainty-aware predictions--a critical feature for trustworthy AI in safety-critical applications. Our model outperforms baselines by achieving a 17-23% improvement in recall, a key metric for flagging potential dangers, while delivering superior calibration. By providing reliable and interpretable risk assessments from satellite imagery alone, our method enables safer autonomous navigation and offers a highly scalable tool for urban planners and policymakers to enhance roadway safety equitably and cost-effectively.

Xin Xing, Gongbo Liang, Hunter Blanton et al.

We propose to apply a 2D CNN architecture to 3D MRI image Alzheimer's disease classification. Training a 3D convolutional neural network (CNN) is time-consuming and computationally expensive. We make use of approximate rank pooling to transform the 3D MRI image volume into a 2D image to use as input to a 2D CNN. We show our proposed CNN model achieves $9.5\%$ better Alzheimer's disease classification accuracy than the baseline 3D models. We also show that our method allows for efficient training, requiring only 20% of the training time compared to 3D CNN models. The code is available online: https://github.com/UkyVision/alzheimer-project.

Ahmad Elallaf, Yu Zhang, Yuktha Priya Masupalli et al.

Vision-language foundation models have emerged as powerful general-purpose representation learners with strong potential for multimodal understanding, but their deterministic embeddings often fail to provide the reliability required for high-stakes biomedical applications. This work introduces MedProbCLIP, a probabilistic vision-language learning framework for chest X-ray and radiology report representation learning and bidirectional retrieval. MedProbCLIP models image and text representations as Gaussian embeddings through a probabilistic contrastive objective that explicitly captures uncertainty and many-to-many correspondences between radiographs and clinical narratives. A variational information bottleneck mitigates overconfident predictions, while MedProbCLIP employs multi-view radiograph encoding and multi-section report encoding during training to provide fine-grained supervision for clinically aligned correspondence, yet requires only a single radiograph and a single report at inference. Evaluated on the MIMIC-CXR dataset, MedProbCLIP outperforms deterministic and probabilistic baselines, including CLIP, CXR-CLIP, and PCME++, in both retrieval and zero-shot classification. Beyond accuracy, MedProbCLIP demonstrates superior calibration, risk-coverage behavior, selective retrieval reliability, and robustness to clinically relevant corruptions, underscoring the value of probabilistic vision-language modeling for improving the trustworthiness and safety of radiology image-text retrieval systems.

Ramya Jonnala, Gongbo Liang, Jeong Yang et al.

The integration of large language models (LLMs) into public transit systems presents a transformative opportunity to enhance urban mobility. This study explores the potential of LLMs to revolutionize public transportation management within the context of San Antonio's transit system. Leveraging the capabilities of LLMs in natural language processing and data analysis, we investigate their capabilities to optimize route planning, reduce wait times, and provide personalized travel assistance. By utilizing the General Transit Feed Specification (GTFS) and other relevant data, this research aims to demonstrate how LLMs can potentially improve resource allocation, elevate passenger satisfaction, and inform data-driven decision-making in transit operations. A comparative analysis of different ChatGPT models was conducted to assess their ability to understand transportation information, retrieve relevant data, and provide comprehensive responses. Findings from this study suggest that while LLMs hold immense promise for public transit, careful engineering and fine-tuning are essential to realizing their full potential. San Antonio serves as a case study to inform the development of LLM-powered transit systems in other urban environments.

Demetrio Deanda, Yuktha Priya Masupalli, Jeong Yang et al.

Medical images and reports offer invaluable insights into patient health. The heterogeneity and complexity of these data hinder effective analysis. To bridge this gap, we investigate contrastive learning models for cross-domain retrieval, which associates medical images with their corresponding clinical reports. This study benchmarks the robustness of four state-of-the-art contrastive learning models: CLIP, CXR-RePaiR, MedCLIP, and CXR-CLIP. We introduce an occlusion retrieval task to evaluate model performance under varying levels of image corruption. Our findings reveal that all evaluated models are highly sensitive to out-of-distribution data, as evidenced by the proportional decrease in performance with increasing occlusion levels. While MedCLIP exhibits slightly more robustness, its overall performance remains significantly behind CXR-CLIP and CXR-RePaiR. CLIP, trained on a general-purpose dataset, struggles with medical image-report retrieval, highlighting the importance of domain-specific training data. The evaluation of this work suggests that more effort needs to be spent on improving the robustness of these models. By addressing these limitations, we can develop more reliable cross-domain retrieval models for medical applications.

Fang Chen, Alex Villa, Gongbo Liang et al.

Training data for class-conditional image synthesis often exhibit a long-tailed distribution with limited images for tail classes. Such an imbalance causes mode collapse and reduces the diversity of synthesized images for tail classes. For class-conditional diffusion models trained on imbalanced data, we aim to improve the diversity and fidelity of tail class images without compromising the quality of head class images. We achieve this by introducing two simple but highly effective loss functions. Firstly, we employ an Unsupervised Contrastive Loss (UCL) utilizing negative samples to increase the distance/dissimilarity among synthetic images. Such regularization is coupled with a standard trick of batch resampling to further diversify tail-class images. Our second loss is an Alignment Loss (AL) that aligns class-conditional generation with unconditional generation at large timesteps. This second loss makes the denoising process insensitive to class conditions for the initial steps, which enriches tail classes through knowledge sharing from head classes. We successfully leverage contrastive learning and conditional-unconditional alignment for class-imbalanced diffusion models. Our framework is easy to implement as demonstrated on both U-Net based architecture and Diffusion Transformer. Our method outperforms vanilla denoising diffusion probabilistic models, score-based diffusion model, and alternative methods for class-imbalanced image generation across various datasets, in particular ImageNet-LT with 256x256 resolution.

Ramya Jonnala, Gongbo Liang, Jeong Yang et al.

The integration of large language models into public transit systems represents a significant advancement in urban transportation management and passenger experience. This study examines the impact of LLMs within San Antonio's public transit system, leveraging their capabilities in natural language processing, data analysis, and real time communication. By utilizing GTFS and other public transportation information, the research highlights the transformative potential of LLMs in enhancing route planning, reducing wait times, and providing personalized travel assistance. Our case study is the city of San Antonio as part of a project aiming to demonstrate how LLMs can optimize resource allocation, improve passenger satisfaction, and support decision making processes in transit management. We evaluated LLM responses to questions related to both information retrieval and also understanding. Ultimately, we believe that the adoption of LLMs in public transit systems can lead to more efficient, responsive, and user-friendly transportation networks, providing a model for other cities to follow.

Gongbo Liang, Izzat Alsmadi

Deep Learning (DL) models are widely used in machine learning due to their performance and ability to deal with large datasets while producing high accuracy and performance metrics. The size of such datasets and the complexity of DL models cause such models to be complex, consuming large amount of resources and time to train. Many recent libraries and applications are introduced to deal with DL complexity and efficiency issues. In this paper, we evaluated one example, Microsoft DeepSpeed library through classification tasks. DeepSpeed public sources reported classification performance metrics on the LeNet architecture. We extended this through evaluating the library on several modern neural network architectures, including convolutional neural networks (CNNs) and Vision Transformer (ViT). Results indicated that DeepSpeed, while can make improvements in some of those cases, it has no or negative impact on others.

Yu Zhang, Gongbo Liang, Nathan Jacobs

Most research on domain adaptation has focused on the purely unsupervised setting, where no labeled examples in the target domain are available. However, in many real-world scenarios, a small amount of labeled target data is available and can be used to improve adaptation. We address this semi-supervised setting and propose to use dynamic feature alignment to address both inter- and intra-domain discrepancy. Unlike previous approaches, which attempt to align source and target features within a mini-batch, we propose to align the target features to a set of dynamically updated class prototypes, which we use both for minimizing divergence and pseudo-labeling. By updating based on class prototypes, we avoid problems that arise in previous approaches due to class imbalances. Our approach, which doesn't require extensive tuning or adversarial training, significantly improves the state of the art for semi-supervised domain adaptation. We provide a quantitative evaluation on two standard datasets, DomainNet and Office-Home, and performance analysis.

Gongbo Liang, Yuanyuan Su, Sheng-Chieh Lin et al.

Most galaxies in the nearby Universe are gravitationally bound to a cluster or group of galaxies. Their optical contents, such as optical richness, are crucial for understanding the co-evolution of galaxies and large-scale structures in modern astronomy and cosmology. The determination of optical richness can be challenging. We propose a self-supervised approach for estimating optical richness from multi-band optical images. The method uses the data properties of the multi-band optical images for pre-training, which enables learning feature representations from a large but unlabeled dataset. We apply the proposed method to the Sloan Digital Sky Survey. The result shows our estimate of optical richness lowers the mean absolute error and intrinsic scatter by 11.84% and 20.78%, respectively, while reducing the need for labeled training data by up to 60%. We believe the proposed method will benefit astronomy and cosmology, where a large number of unlabeled multi-band images are available, but acquiring image labels is costly.

Gongbo Liang, Connor Greenwell, Yu Zhang et al.

A key challenge in training neural networks for a given medical imaging task is often the difficulty of obtaining a sufficient number of manually labeled examples. In contrast, textual imaging reports, which are often readily available in medical records, contain rich but unstructured interpretations written by experts as part of standard clinical practice. We propose using these textual reports as a form of weak supervision to improve the image interpretation performance of a neural network without requiring additional manually labeled examples. We use an image-text matching task to train a feature extractor and then fine-tune it in a transfer learning setting for a supervised task using a small labeled dataset. The end result is a neural network that automatically interprets imagery without requiring textual reports during inference. This approach can be applied to any task for which text-image pairs are readily available. We evaluate our method on three classification tasks and find consistent performance improvements, reducing the need for labeled data by 67%-98%.

Gongbo Liang, Yu Zhang, Xiaoqin Wang et al.

Recent works have shown that deep neural networks can achieve super-human performance in a wide range of image classification tasks in the medical imaging domain. However, these works have primarily focused on classification accuracy, ignoring the important role of uncertainty quantification. Empirically, neural networks are often miscalibrated and overconfident in their predictions. This miscalibration could be problematic in any automatic decision-making system, but we focus on the medical field in which neural network miscalibration has the potential to lead to significant treatment errors. We propose a novel calibration approach that maintains the overall classification accuracy while significantly improving model calibration. The proposed approach is based on expected calibration error, which is a common metric for quantifying miscalibration. Our approach can be easily integrated into any classification task as an auxiliary loss term, thus not requiring an explicit training round for calibration. We show that our approach reduces calibration error significantly across various architectures and datasets.

Yu Zhang, Gongbo Liang, Nathan Jacobs et al.

Generalization is one of the key challenges in the clinical validation and application of deep learning models to medical images. Studies have shown that such models trained on publicly available datasets often do not work well on real-world clinical data due to the differences in patient population and image device configurations. Also, manually annotating clinical images is expensive. In this work, we propose an unsupervised domain adaptation (UDA) method using Cycle-GAN to improve the generalization ability of the model without using any additional manual annotations.

Gongbo Liang, Xiaoqin Wang, Yu Zhang et al.

Breast cancer is the malignant tumor that causes the highest number of cancer deaths in females. Digital mammograms (DM or 2D mammogram) and digital breast tomosynthesis (DBT or 3D mammogram) are the two types of mammography imagery that are used in clinical practice for breast cancer detection and diagnosis. Radiologists usually read both imaging modalities in combination; however, existing computer-aided diagnosis tools are designed using only one imaging modality. Inspired by clinical practice, we propose an innovative convolutional neural network (CNN) architecture for breast cancer classification, which uses both 2D and 3D mammograms, simultaneously. Our experiment shows that the proposed method significantly improves the performance of breast cancer classification. By assembling three CNN classifiers, the proposed model achieves 0.97 AUC, which is 34.72% higher than the methods using only one imaging modality.

Yu Zhang, Xiaoqin Wang, Hunter Blanton et al.

Automated methods for breast cancer detection have focused on 2D mammography and have largely ignored 3D digital breast tomosynthesis (DBT), which is frequently used in clinical practice. The two key challenges in developing automated methods for DBT classification are handling the variable number of slices and retaining slice-to-slice changes. We propose a novel deep 2D convolutional neural network (CNN) architecture for DBT classification that simultaneously overcomes both challenges. Our approach operates on the full volume, regardless of the number of slices, and allows the use of pre-trained 2D CNNs for feature extraction, which is important given the limited amount of annotated training data. In an extensive evaluation on a real-world clinical dataset, our approach achieves 0.854 auROC, which is 28.80% higher than approaches based on 3D CNNs. We also find that these improvements are stable across a range of model configurations.

Yu Zhang, Gongbo Liang, Tawfiq Salem et al.

Despite remarkable performance across a broad range of tasks, neural networks have been shown to be vulnerable to adversarial attacks. Many works focus on adversarial attacks and defenses on 2D images, but few focus on 3D point clouds. In this paper, our goal is to enhance the adversarial robustness of PointNet, which is one of the most widely used models for 3D point clouds. We apply the fast gradient sign attack method (FGSM) on 3D point clouds and find that FGSM can be used to generate not only adversarial images but also adversarial point clouds. To minimize the vulnerability of PointNet to adversarial attacks, we propose Defense-PointNet. We compare our model with two baseline approaches and show that Defense-PointNet significantly improves the robustness of the network against adversarial samples.