NAJul 18, 2018
Reconstruction of optical vector-fields with applications in endoscopic imagingMilana Gataric, George S. D. Gordon, Francesco Renna et al.
We introduce a framework for the reconstruction of the amplitude, phase and polarisation of an optical vector-field using calibration measurements acquired by an imaging device with an unknown linear transformation. By incorporating effective regularisation terms, this new approach is able to recover an optical vector-field with respect to an arbitrary representation system, which may be different from the one used in calibration. In particular, it enables the recovery of an optical vector-field with respect to a Fourier basis, which is shown to yield indicative features of increased scattering associated with tissue abnormalities. We demonstrate the effectiveness of our approach using synthetic holographic images as well as biological tissue samples in an experimental setting where measurements of an optical vector-field are acquired by a fibre endoscope, and observe that indeed the recovered Fourier coefficients are useful in distinguishing healthy tissues from lesions in early stages of oesophageal cancer.
NAMay 8, 2017
Computing reconstructions from nonuniform Fourier samples: Universality of stability barriers and stable sampling ratesBen Adcock, Milana Gataric, José Luis Romero
We study the problem of recovering an unknown compactly-supported multivariate function from samples of its Fourier transform that are acquired nonuniformly, i.e. not necessarily on a uniform Cartesian grid. Reconstruction problems of this kind arise in various imaging applications, where Fourier samples are taken along radial lines or spirals for example. Specifically, we consider finite-dimensional reconstructions, where a limited number of samples is available, and investigate the rate of convergence of such approximate solutions and their numerical stability. We show that the proportion of Fourier samples that allow for stable approximations of a given numerical accuracy is independent of the specific sampling geometry and is therefore universal for different sampling scenarios. This allows us to relate both sufficient and necessary conditions for different sampling setups and to exploit several results that were previously available only for very specific sampling geometries. The results are obtained by developing: (i) a transference argument for different measures of the concentration of the Fourier transform and Fourier samples; (ii) frame bounds valid up to the critical sampling density, which depend explicitly on the sampling set and the spectrum. As an application, we identify sufficient and necessary conditions for stable and accurate reconstruction of algebraic polynomials or wavelet coefficients from nonuniform Fourier data.
NAOct 1, 2014
Recovering piecewise smooth functions from nonuniform Fourier measurementsBen Adcock, Milana Gataric, Anders C. Hansen
In this paper, we consider the problem of reconstructing piecewise smooth functions to high accuracy from nonuniform samples of their Fourier transform. We use the framework of nonuniform generalized sampling (NUGS) to do this, and to ensure high accuracy we employ reconstruction spaces consisting of splines or (piecewise) polynomials. We analyze the relation between the dimension of the reconstruction space and the bandwidth of the nonuniform samples, and show that it is linear for splines and piecewise polynomials of fixed degree, and quadratic for piecewise polynomials of varying degree.
NAMar 6, 2016
A practical guide to the recovery of wavelet coefficients from Fourier measurementsMilana Gataric, Clarice Poon
In a series of recent papers (Adcock, Hansen and Poon, 2013, Appl. Comput. Harm. Anal. 45(5):3132-3167), (Adcock, Gataric and Hansen, 2014, SIAM J. Imaging Sci. 7(3):1690-1723) and (Adcock, Hansen, Kutyniok and Ma, 2015, SIAM J. Math. Anal. 47(2):1196-1233), it was shown that one can optimally recover the wavelet coefficients of an unknown compactly supported function from pointwise evaluations of its Fourier transform via the method of generalized sampling. While these papers focused on the optimality of generalized sampling in terms of its stability and error bounds, the current paper explains how this optimal method can be implemented to yield a computationally efficient algorithm. In particular, we show that generalized sampling has a computational complexity of $\mathcal{O}(M(N)\log N)$ when recovering the first $N$ boundary-corrected wavelet coefficients of an unknown compactly supported function from $M(N)$ Fourier samples. Therefore, due to the linear correspondences between the number of samples $M$ and number of coefficients $N$ shown previously, generalized sampling offers a computationally optimal way of recovering wavelet coefficients from Fourier data.
STFeb 20, 2020
High-resolution signal recovery via generalized sampling and functional principal component analysisMilana Gataric
In this paper, we introduce a computational framework for recovering a high-resolution approximation of an unknown function from its low-resolution indirect measurements as well as high-resolution training observations by merging the frameworks of generalized sampling and functional principal component analysis. In particular, we increase the signal resolution via a data driven approach, which models the function of interest as a realization of a random field and leverages a training set of observations generated via the same underlying random process. We study the performance of the resulting estimation procedure and show that high-resolution recovery is indeed possible provided appropriate low-rank and angle conditions hold and provided the training set is sufficiently large relative to the desired resolution. Moreover, we show that the size of the training set can be reduced by leveraging sparse representations of the functional principal components. Furthermore, the effectiveness of the proposed reconstruction procedure is illustrated by various numerical examples.
MEDec 15, 2017
Sparse principal component analysis via axis-aligned random projectionsMilana Gataric, Tengyao Wang, Richard J. Samworth
We introduce a new method for sparse principal component analysis, based on the aggregation of eigenvector information from carefully-selected axis-aligned random projections of the sample covariance matrix. Unlike most alternative approaches, our algorithm is non-iterative, so is not vulnerable to a bad choice of initialisation. We provide theoretical guarantees under which our principal subspace estimator can attain the minimax optimal rate of convergence in polynomial time. In addition, our theory provides a more refined understanding of the statistical and computational trade-off in the problem of sparse principal component estimation, revealing a subtle interplay between the effective sample size and the number of random projections that are required to achieve the minimax optimal rate. Numerical studies provide further insight into the procedure and confirm its highly competitive finite-sample performance.
NASep 9, 2016
Density theorems for nonuniform sampling of bandlimited functions using derivatives or bunched measurementsBen Adcock, Milana Gataric, Anders C. Hansen
We provide sufficient density condition for a set of nonuniform samples to give rise to a set of sampling for multivariate bandlimited functions when the measurements consist of pointwise evaluations of a function and its first $k$ derivatives. Along with explicit estimates of corresponding frame bounds, we derive the explicit density bound and show that, as $k$ increases, it grows linearly in $k+1$ with the constant of proportionality $1/\mathrm{e}$. Seeking larger gap conditions, we also prove a multivariate perturbation result for nonuniform samples that are sufficiently close to sets of sampling, e.g. to uniform samples taken at $k+1$ times the Nyquist rate. Additionally, in the univariate setting, we consider a related problem of so-called nonuniform bunched sampling, where in each sampling interval $s+1$ bunched measurements of a function are taken and the sampling intervals are permitted to be of different length. We derive an explicit density condition which grows linearly in $s+1$ for large $s$, with the constant of proportionality depending on the width of the bunches. The width of the bunches is allowed to be arbitrarily small, and moreover, for sufficiently narrow bunches and sufficiently large $s$, we obtain the same result as in the case of univariate sampling with $s$ derivatives.
NASep 6, 2015
Weighted frames of exponentials and stable recovery of multidimensional functions from nonuniform Fourier samplesBen Adcock, Milana Gataric, Anders C. Hansen
In this paper, we consider the problem of recovering a compactly supported multivariate function from a collection of pointwise samples of its Fourier transform taken nonuniformly. We do this by using the concept of weighted Fourier frames. A seminal result of Beurling shows that sample points give rise to a classical Fourier frame provided they are relatively separated and of sufficient density. However, this result does not allow for arbitrary clustering of sample points, as is often the case in practice. Whilst keeping the density condition sharp and dimension independent, our first result removes the separation condition and shows that density alone suffices. However, this result does not lead to estimates for the frame bounds. A known result of Groechenig provides explicit estimates, but only subject to a density condition that deteriorates linearly with dimension. In our second result we improve these bounds by reducing the dimension dependence. In particular, we provide explicit frame bounds which are dimensionless for functions having compact support contained in a sphere. Next, we demonstrate how our two main results give new insight into a reconstruction algorithm---based on the existing generalized sampling framework---that allows for stable and quasi-optimal reconstruction in any particular basis from a finite collection of samples. Finally, we construct sufficiently dense sampling schemes that are often used in practice---jittered, radial and spiral sampling schemes---and provide several examples illustrating the effectiveness of our approach when tested on these schemes.