Omar Faruque

Md Biplob Hosen, Md Alomgeer Hussein, Md Akmol Masud et al.

Patient portals now give individuals direct access to their electronic health records (EHRs), yet access alone does not ensure patients understand or act on the complex clinical information contained in these records. The ArchEHR-QA 2026 shared task addresses this challenge by focusing on grounded question answering over EHRs, and this paper presents the system developed by the HealthNLP_Retrievers team for this task. The proposed approach uses a multi-stage cascaded pipeline powered by the Gemini 2.5 Pro large language model to interpret patient-authored questions and retrieve relevant evidence from lengthy clinical notes. Our architecture comprises four integrated modules: (1) a few-shot query reformulation unit which summarizes verbose patient queries; (2) a heuristic-based evidence scorer which ranks clinical sentences to prioritize recall; (3) a grounded response generator which synthesizes professional-caliber answers restricted strictly to identified evidence; and (4) a high-precision many-to-many alignment framework which links generated answers to supporting clinical sentences. This cascaded approach achieved competitive results. Across the individual tracks, the system ranked 1st in question interpretation, 5th in answer generation, 7th in evidence identification, and 9th in answer-evidence alignment. These results show that integrating large language models within a structured multi-stage pipeline improves grounding, precision, and the professional quality of patient-oriented health communication. To support reproducibility, our source code is publicly available in our GitHub repository

Md Maidul Islam, Md Omar Faruque, Joshua Butterfield et al.

Power quality (PQ) events are recorded by PQ meters whenever anomalous events are detected on the power grid. Using neural networks with machine learning can aid in accurately classifying the recorded waveforms and help power system engineers diagnose and rectify the root causes of problems. However, many of the waveforms captured during a disturbance in the power system need to be labeled for supervised learning, leaving a large number of data recordings for engineers to process manually or go unseen. This paper presents an autoencoder and K-means clustering-based unsupervised technique that can be used to cluster PQ events into categories like sag, interruption, transients, normal, and harmonic distortion to enable filtering of anomalous waveforms from recurring or normal waveforms. The method is demonstrated using three-phase, field-obtained voltage waveforms recorded in a distribution grid. First, a convolutional autoencoder compresses the input signals into a set of lower feature dimensions which, after further processing, is passed to the K-means algorithm to identify data clusters. Using a small, labeled dataset, numerical labels are then assigned to events based on a cosine similarity analysis. Finally, the study analyzes the clusters using the t-distributed stochastic neighbor embedding (t-SNE) visualization tool, demonstrating that the technique can help investigate a large number of captured events in a quick manner.

Sahara Ali, Omar Faruque, Jianwu Wang

Spatial interference (SI) occurs when the treatment at one location affects the outcomes at other locations. Accounting for spatial interference in spatiotemporal settings poses further challenges as interference violates the stable unit treatment value assumption, making it infeasible for standard causal inference methods to quantify the effects of time-varying treatment at spatially varying outcomes. In this paper, we first formalize the concept of spatial interference in case of time-varying treatment assignments by extending the potential outcome framework under the assumption of no unmeasured confounding. We then propose our deep learning based potential outcome model for spatiotemporal causal inference. We utilize latent factor modeling to reduce the bias due to time-varying confounding while leveraging the power of U-Net architecture to capture global and local spatial interference in data over time. Our causal estimators are an extension of average treatment effect (ATE) for estimating direct (DATE) and indirect effects (IATE) of spatial interference on treated and untreated data. Being the first of its kind deep learning based spatiotemporal causal inference technique, our approach shows advantages over several baseline methods based on the experiment results on two synthetic datasets, with and without spatial interference. Our results on real-world climate dataset also align with domain knowledge, further demonstrating the effectiveness of our proposed method.