Andrew Adams

Alexander J Root, Christophe Gyurgyik, Purvi Goel et al.

Trees can accelerate queries that search or aggregate values over large collections. They achieve this by storing metadata that enables quick pruning (or inclusion) of subtrees when predicates on that metadata can prove that none (or all) of the data in a subtree affect the query result. Existing systems implement this pruning logic manually for each query predicate and data structure. We generalize and mechanize this class of optimization. Our method derives conditions for when subtrees can be pruned (or included wholesale), expressed in terms of the metadata available at each node. We efficiently generate these conditions using symbolic interval analysis, extended with new rules to handle geometric predicates (e.g., intersection, containment). Additionally, our compiler fuses compound queries (e.g., reductions on filters) into a single tree traversal. These techniques enable the automatic derivation of generalized single-index and dual-index tree joins that support a wide class of join predicates beyond standard equality and range predicates. The generated traversals match the behavior of expert-written code that implements query-specific traversals, and can asymptotically outperform the linear scans and nested-loop joins that existing systems fall back to when hand-written cases do not apply.

Andrew Adams, Kay Avila, Jim Basney et al.

This article describes experiences and lessons learned from the Trusted CI project, funded by the US National Science Foundation to serve the community as the NSF Cybersecurity Center of Excellence. Trusted CI is an effort to address cybersecurity for the open science community through a single organization that provides leadership, training, consulting, and knowledge to that community. The article describes the experiences and lessons learned of Trusted CI regarding both cybersecurity for open science and managing the process of providing centralized services to a broad and diverse community.

Nicolas Vasilache, Oleksandr Zinenko, Theodoros Theodoridis et al.

Deep learning models with convolutional and recurrent networks are now ubiquitous and analyze massive amounts of audio, image, video, text and graph data, with applications in automatic translation, speech-to-text, scene understanding, ranking user preferences, ad placement, etc. Competing frameworks for building these networks such as TensorFlow, Chainer, CNTK, Torch/PyTorch, Caffe1/2, MXNet and Theano, explore different tradeoffs between usability and expressiveness, research or production orientation and supported hardware. They operate on a DAG of computational operators, wrapping high-performance libraries such as CUDNN (for NVIDIA GPUs) or NNPACK (for various CPUs), and automate memory allocation, synchronization, distribution. Custom operators are needed where the computation does not fit existing high-performance library calls, usually at a high engineering cost. This is frequently required when new operators are invented by researchers: such operators suffer a severe performance penalty, which limits the pace of innovation. Furthermore, even if there is an existing runtime call these frameworks can use, it often doesn't offer optimal performance for a user's particular network architecture and dataset, missing optimizations between operators as well as optimizations that can be done knowing the size and shape of data. Our contributions include (1) a language close to the mathematics of deep learning called Tensor Comprehensions, (2) a polyhedral Just-In-Time compiler to convert a mathematical description of a deep learning DAG into a CUDA kernel with delegated memory management and synchronization, also providing optimizations such as operator fusion and specialization for specific sizes, (3) a compilation cache populated by an autotuner. [Abstract cutoff]