LGMay 31, 2021
OASIS: An Active Framework for Set InversionBinh T. Nguyen, Duy M. Nguyen, Lam Si Tung Ho et al.
In this work, we introduce a novel method for solving the set inversion problem by formulating it as a binary classification problem. Aiming to develop a fast algorithm that can work effectively with high-dimensional and computationally expensive nonlinear models, we focus on active learning, a family of new and powerful techniques which can achieve the same level of accuracy with fewer data points compared to traditional learning methods. Specifically, we propose OASIS, an active learning framework using Support Vector Machine algorithms for solving the problem of set inversion. Our method works well in high dimensions and its computational cost is relatively robust to the increase of dimension. We illustrate the performance of OASIS by several simulation studies and show that our algorithm outperforms VISIA, the state-of-the-art method.
IVSep 23, 2020
An Attention Mechanism with Multiple Knowledge Sources for COVID-19 Detection from CT ImagesDuy M. H. Nguyen, Duy M. Nguyen, Huong Vu et al.
Until now, Coronavirus SARS-CoV-2 has caused more than 850,000 deaths and infected more than 27 million individuals in over 120 countries. Besides principal polymerase chain reaction (PCR) tests, automatically identifying positive samples based on computed tomography (CT) scans can present a promising option in the early diagnosis of COVID-19. Recently, there have been increasing efforts to utilize deep networks for COVID-19 diagnosis based on CT scans. While these approaches mostly focus on introducing novel architectures, transfer learning techniques, or construction large scale data, we propose a novel strategy to improve the performance of several baselines by leveraging multiple useful information sources relevant to doctors' judgments. Specifically, infected regions and heat maps extracted from learned networks are integrated with the global image via an attention mechanism during the learning process. This procedure not only makes our system more robust to noise but also guides the network focusing on local lesion areas. Extensive experiments illustrate the superior performance of our approach compared to recent baselines. Furthermore, our learned network guidance presents an explainable feature to doctors as we can understand the connection between input and output in a grey-box model.
CVFeb 5, 2018
ASMCNN: An Efficient Brain Extraction Using Active Shape Model and Convolutional Neural NetworksDuy H. M. Nguyen, Duy M. Nguyen, Mai T. N. Truong et al.
Brain extraction (skull stripping) is a challenging problem in neuroimaging. It is due to the variability in conditions from data acquisition or abnormalities in images, making brain morphology and intensity characteristics changeable and complicated. In this paper, we propose an algorithm for skull stripping in Magnetic Resonance Imaging (MRI) scans, namely ASMCNN, by combining the Active Shape Model (ASM) and Convolutional Neural Network (CNN) for taking full of their advantages to achieve remarkable results. Instead of working with 3D structures, we process 2D image sequences in the sagittal plane. First, we divide images into different groups such that, in each group, shapes and structures of brain boundaries have similar appearances. Second, a modified version of ASM is used to detect brain boundaries by utilizing prior knowledge of each group. Finally, CNN and post-processing methods, including Conditional Random Field (CRF), Gaussian processes, and several special rules are applied to refine the segmentation contours. Experimental results show that our proposed method outperforms current state-of-the-art algorithms by a significant margin in all experiments.