Junwen Bai

Tao Lei, Junwen Bai, Siddhartha Brahma et al. · deepmind

We propose Conditional Adapter (CoDA), a parameter-efficient transfer learning method that also improves inference efficiency. CoDA generalizes beyond standard adapter approaches to enable a new way of balancing speed and accuracy using conditional computation. Starting with an existing dense pretrained model, CoDA adds sparse activation together with a small number of new parameters and a light-weight training phase. Our experiments demonstrate that the CoDA approach provides an unexpectedly efficient way to transfer knowledge. Across a variety of language, vision, and speech tasks, CoDA achieves a 2x to 8x inference speed-up compared to the state-of-the-art Adapter approaches with moderate to no accuracy loss and the same parameter efficiency.

Bo Li, Dongseong Hwang, Zhouyuan Huo et al.

Foundation models (FMs), that are trained on broad data at scale and are adaptable to a wide range of downstream tasks, have brought large interest in the research community. Benefiting from the diverse data sources such as different modalities, languages and application domains, foundation models have demonstrated strong generalization and knowledge transfer capabilities. In this paper, we present a pioneering study towards building an efficient solution for FM-based speech recognition systems. We adopt the recently developed self-supervised BEST-RQ for pretraining, and propose the joint finetuning with both source and unsupervised target domain data using JUST Hydra. The FM encoder adapter and decoder are then finetuned to the target domain with a small amount of supervised in-domain data. On a large-scale YouTube and Voice Search task, our method is shown to be both data and model parameter efficient. It achieves the same quality with only 21.6M supervised in-domain data and 130.8M finetuned parameters, compared to the 731.1M model trained from scratch on additional 300M supervised in-domain data.

Junwen Bai, Yuanqi Du, Yingheng Wang et al.

Modern machine learning techniques have been extensively applied to materials science, especially for property prediction tasks. A majority of these methods address scalar property predictions, while more challenging spectral properties remain less emphasized. We formulate a crystal-to-sequence learning task and propose a novel attention-based learning method, Xtal2DoS, which decodes the sequential representation of the material density of states (DoS) properties by incorporating the learned atomic embeddings through attention networks. Experiments show Xtal2DoS is faster than the existing models, and consistently outperforms other state-of-the-art methods on four metrics for two fundamental spectral properties, phonon and electronic DoS.

Gemini Team, Petko Georgiev, Ving Ian Lei et al. · deepmind, mila

In this report, we introduce the Gemini 1.5 family of models, representing the next generation of highly compute-efficient multimodal models capable of recalling and reasoning over fine-grained information from millions of tokens of context, including multiple long documents and hours of video and audio. The family includes two new models: (1) an updated Gemini 1.5 Pro, which exceeds the February version on the great majority of capabilities and benchmarks; (2) Gemini 1.5 Flash, a more lightweight variant designed for efficiency with minimal regression in quality. Gemini 1.5 models achieve near-perfect recall on long-context retrieval tasks across modalities, improve the state-of-the-art in long-document QA, long-video QA and long-context ASR, and match or surpass Gemini 1.0 Ultra's state-of-the-art performance across a broad set of benchmarks. Studying the limits of Gemini 1.5's long-context ability, we find continued improvement in next-token prediction and near-perfect retrieval (>99%) up to at least 10M tokens, a generational leap over existing models such as Claude 3.0 (200k) and GPT-4 Turbo (128k). Finally, we highlight real-world use cases, such as Gemini 1.5 collaborating with professionals on completing their tasks achieving 26 to 75% time savings across 10 different job categories, as well as surprising new capabilities of large language models at the frontier; when given a grammar manual for Kalamang, a language with fewer than 200 speakers worldwide, the model learns to translate English to Kalamang at a similar level to a person who learned from the same content.

Gheorghe Comanici, Eric Bieber, Mike Schaekermann et al. · amazon-science, baidu

In this report, we introduce the Gemini 2.X model family: Gemini 2.5 Pro and Gemini 2.5 Flash, as well as our earlier Gemini 2.0 Flash and Flash-Lite models. Gemini 2.5 Pro is our most capable model yet, achieving SoTA performance on frontier coding and reasoning benchmarks. In addition to its incredible coding and reasoning skills, Gemini 2.5 Pro is a thinking model that excels at multimodal understanding and it is now able to process up to 3 hours of video content. Its unique combination of long context, multimodal and reasoning capabilities can be combined to unlock new agentic workflows. Gemini 2.5 Flash provides excellent reasoning abilities at a fraction of the compute and latency requirements and Gemini 2.0 Flash and Flash-Lite provide high performance at low latency and cost. Taken together, the Gemini 2.X model generation spans the full Pareto frontier of model capability vs cost, allowing users to explore the boundaries of what is possible with complex agentic problem solving.

Shufeng Kong, Xingru Yang, Yuanyuan Wei et al.

Traditional Chinese Medicine (TCM) is a holistic medical system with millennia of accumulated clinical experience, playing a vital role in global healthcare-particularly across East Asia. However, the implicit reasoning, diverse textual forms, and lack of standardization in TCM pose major challenges for computational modeling and evaluation. Large Language Models (LLMs) have demonstrated remarkable potential in processing natural language across diverse domains, including general medicine. Yet, their systematic evaluation in the TCM domain remains underdeveloped. Existing benchmarks either focus narrowly on factual question answering or lack domain-specific tasks and clinical realism. To fill this gap, we introduce MTCMB-a Multi-Task Benchmark for Evaluating LLMs on TCM Knowledge, Reasoning, and Safety. Developed in collaboration with certified TCM experts, MTCMB comprises 12 sub-datasets spanning five major categories: knowledge QA, language understanding, diagnostic reasoning, prescription generation, and safety evaluation. The benchmark integrates real-world case records, national licensing exams, and classical texts, providing an authentic and comprehensive testbed for TCM-capable models. Preliminary results indicate that current LLMs perform well on foundational knowledge but fall short in clinical reasoning, prescription planning, and safety compliance. These findings highlight the urgent need for domain-aligned benchmarks like MTCMB to guide the development of more competent and trustworthy medical AI systems. All datasets, code, and evaluation tools are publicly available at: https://github.com/Wayyuanyuan/MTCMB.

Junwen Bai, Bo Li, Qiujia Li et al.

The end-to-end ASR model is often desired in the streaming multilingual scenario since it is easier to deploy and can benefit from pre-trained speech models such as powerful foundation models. Meanwhile, the heterogeneous nature and imbalanced data abundance of different languages may cause performance degradation, leading to asynchronous peak performance for different languages during training, especially on tail ones. Sometimes even the data itself may become unavailable as a result of the enhanced privacy protection. Existing work tend to significantly increase the model size or learn language-specific decoders to accommodate each language separately. In this study, we explore simple yet effective Language-Dependent Adapter (LDA) finetuning under a cascaded Conformer transducer framework enhanced by teacher pseudo-labeling for tail languages in the streaming multilingual ASR. The adapter only accounts for 0.4% of the full model per language. It is plugged into the frozen foundation model and is the only trainable module during the finetuning process with noisy student training. The final model merges the adapter parameters from different checkpoints for different languages. The model performance is validated on a challenging multilingual dictation dataset, which includes 39 tail languages across Latin, Greek, Arabic, etc. Our proposed method brings 12.2% word error rate reduction on average and up to 37.5% on a single locale. Furthermore, we show that our parameter-efficient LDA can match the quality of the full model finetuning, thus greatly alleviating the asynchronous peak performance issue.

Wen Wu, Bo Li, Chao Zhang et al.

The subjective perception of emotion leads to inconsistent labels from human annotators. Typically, utterances lacking majority-agreed labels are excluded when training an emotion classifier, which cause problems when encountering ambiguous emotional expressions during testing. This paper investigates three methods to handle ambiguous emotion. First, we show that incorporating utterances without majority-agreed labels as an additional class in the classifier reduces the classification performance of the other emotion classes. Then, we propose detecting utterances with ambiguous emotions as out-of-domain samples by quantifying the uncertainty in emotion classification using evidential deep learning. This approach retains the classification accuracy while effectively detects ambiguous emotion expressions. Furthermore, to obtain fine-grained distinctions among ambiguous emotions, we propose representing emotion as a distribution instead of a single class label. The task is thus re-framed from classification to distribution estimation where every individual annotation is taken into account, not just the majority opinion. The evidential uncertainty measure is extended to quantify the uncertainty in emotion distribution estimation. Experimental results on the IEMOCAP and CREMA-D datasets demonstrate the superior capability of the proposed method in terms of majority class prediction, emotion distribution estimation, and uncertainty estimation.

Junwen Bai, Shufeng Kong, Carla P. Gomes

Multi-label classification (MLC) is a prediction task where each sample can have more than one label. We propose a novel contrastive learning boosted multi-label prediction model based on a Gaussian mixture variational autoencoder (C-GMVAE), which learns a multimodal prior space and employs a contrastive loss. Many existing methods introduce extra complex neural modules like graph neural networks to capture the label correlations, in addition to the prediction modules. We find that by using contrastive learning in the supervised setting, we can exploit label information effectively in a data-driven manner, and learn meaningful feature and label embeddings which capture the label correlations and enhance the predictive power. Our method also adopts the idea of learning and aligning latent spaces for both features and labels. In contrast to previous works based on a unimodal prior, C-GMVAE imposes a Gaussian mixture structure on the latent space, to alleviate the posterior collapse and over-regularization issues. C-GMVAE outperforms existing methods on multiple public datasets and can often match other models' full performance with only 50% of the training data. Furthermore, we show that the learnt embeddings provide insights into the interpretation of label-label interactions.

Joshua Fan, Junwen Bai, Zhiyun Li et al.

Climate change is posing new challenges to crop-related concerns including food insecurity, supply stability and economic planning. As one of the central challenges, crop yield prediction has become a pressing task in the machine learning field. Despite its importance, the prediction task is exceptionally complicated since crop yields depend on various factors such as weather, land surface, soil quality as well as their interactions. In recent years, machine learning models have been successfully applied in this domain. However, these models either restrict their tasks to a relatively small region, or only study over a single or few years, which makes them hard to generalize spatially and temporally. In this paper, we introduce a novel graph-based recurrent neural network for crop yield prediction, to incorporate both geographical and temporal knowledge in the model, and further boost predictive power. Our method is trained, validated, and tested on over 2000 counties from 41 states in the US mainland, covering years from 1981 to 2019. As far as we know, this is the first machine learning method that embeds geographical knowledge in crop yield prediction and predicts the crop yields at county level nationwide. We also laid a solid foundation for the comparison with other machine learning baselines by applying well-known linear models, tree-based models, deep learning methods and comparing their performance. Experiments show that our proposed method consistently outperforms the existing state-of-the-art methods on various metrics, validating the effectiveness of geospatial and temporal information.

Junwen Bai, Bo Li, Yu Zhang et al.

Self-supervised training has shown promising gains in pretraining models and facilitating the downstream finetuning for speech recognition, like multilingual ASR. Most existing methods adopt a 2-stage scheme where the self-supervised loss is optimized in the first pretraining stage, and the standard supervised finetuning resumes in the second stage. In this paper, we propose an end-to-end (E2E) Joint Unsupervised and Supervised Training (JUST) method to combine the supervised RNN-T loss and the self-supervised contrastive and masked language modeling (MLM) losses. We validate its performance on the public dataset Multilingual LibriSpeech (MLS), which includes 8 languages and is extremely imbalanced. On MLS, we explore (1) JUST trained from scratch, and (2) JUST finetuned from a pretrained checkpoint. Experiments show that JUST can consistently outperform other existing state-of-the-art methods, and beat the monolingual baseline by a significant margin, demonstrating JUST's capability of handling low-resource languages in multilingual ASR. Our average WER of all languages outperforms average monolingual baseline by 33.3%, and the state-of-the-art 2-stage XLSR by 32%. On low-resource languages like Polish, our WER is less than half of the monolingual baseline and even beats the supervised transfer learning method which uses external supervision.

Junwen Bai, Weiran Wang, Carla Gomes

Self-supervised disentangled representation learning is a critical task in sequence modeling. The learnt representations contribute to better model interpretability as well as the data generation, and improve the sample efficiency for downstream tasks. We propose a novel sequence representation learning method, named Contrastively Disentangled Sequential Variational Autoencoder (C-DSVAE), to extract and separate the static (time-invariant) and dynamic (time-variant) factors in the latent space. Different from previous sequential variational autoencoder methods, we use a novel evidence lower bound which maximizes the mutual information between the input and the latent factors, while penalizes the mutual information between the static and dynamic factors. We leverage contrastive estimations of the mutual information terms in training, together with simple yet effective augmentation techniques, to introduce additional inductive biases. Our experiments show that C-DSVAE significantly outperforms the previous state-of-the-art methods on multiple metrics.

Bo Li, Ruoming Pang, Tara N. Sainath et al.

Building ASR models across many languages is a challenging multi-task learning problem due to large variations and heavily unbalanced data. Existing work has shown positive transfer from high resource to low resource languages. However, degradations on high resource languages are commonly observed due to interference from the heterogeneous multilingual data and reduction in per-language capacity. We conduct a capacity study on a 15-language task, with the amount of data per language varying from 7.6K to 53.5K hours. We adopt GShard [1] to efficiently scale up to 10B parameters. Empirically, we find that (1) scaling the number of model parameters is an effective way to solve the capacity bottleneck - our 500M-param model already outperforms monolingual baselines and scaling it to 1B and 10B brought further quality gains; (2) larger models are not only more data efficient, but also more efficient in terms of training cost as measured in TPU days - the 1B-param model reaches the same accuracy at 34% of training time as the 500M-param model; (3) given a fixed capacity budget, adding depth works better than width and large encoders do better than large decoders; (4) with continuous training, they can be adapted to new languages and domains.

Wenting Zhao, Shufeng Kong, Junwen Bai et al.

Understanding how environmental characteristics affect bio-diversity patterns, from individual species to communities of species, is critical for mitigating effects of global change. A central goal for conservation planning and monitoring is the ability to accurately predict the occurrence of species communities and how these communities change over space and time. This in turn leads to a challenging and long-standing problem in the field of computer science - how to perform ac-curate multi-label classification with hundreds of labels? The key challenge of this problem is its exponential-sized output space with regards to the number of labels to be predicted.Therefore, it is essential to facilitate the learning process by exploiting correlations (or dependency) among labels. Previous methods mostly focus on modelling the correlation on label pairs; however, complex relations between real-world objects often go beyond second order. In this paper, we pro-pose a novel framework for multi-label classification, High-order Tie-in Variational Autoencoder (HOT-VAE), which per-forms adaptive high-order label correlation learning. We experimentally verify that our model outperforms the existing state-of-the-art approaches on a bird distribution dataset on both conventional F1 scores and a variety of ecological metrics. To show our method is general, we also perform empirical analysis on seven other public real-world datasets in several application domains, and Hot-VAE exhibits superior performance to previous methods.

Shufeng Kong, Junwen Bai, Jae Hee Lee et al.

A key problem in computational sustainability is to understand the distribution of species across landscapes over time. This question gives rise to challenging large-scale prediction problems since (i) hundreds of species have to be simultaneously modeled and (ii) the survey data are usually inflated with zeros due to the absence of species for a large number of sites. The problem of tackling both issues simultaneously, which we refer to as the zero-inflated multi-target regression problem, has not been addressed by previous methods in statistics and machine learning. In this paper, we propose a novel deep model for the zero-inflated multi-target regression problem. To this end, we first model the joint distribution of multiple response variables as a multivariate probit model and then couple the positive outcomes with a multivariate log-normal distribution. By penalizing the difference between the two distributions' covariance matrices, a link between both distributions is established. The whole model is cast as an end-to-end learning framework and we provide an efficient learning algorithm for our model that can be fully implemented on GPUs. We show that our model outperforms the existing state-of-the-art baselines on two challenging real-world species distribution datasets concerning bird and fish populations.

Junwen Bai, Weiran Wang, Yingbo Zhou et al.

We propose Deep Autoencoding Predictive Components (DAPC) -- a self-supervised representation learning method for sequence data, based on the intuition that useful representations of sequence data should exhibit a simple structure in the latent space. We encourage this latent structure by maximizing an estimate of predictive information of latent feature sequences, which is the mutual information between past and future windows at each time step. In contrast to the mutual information lower bound commonly used by contrastive learning, the estimate of predictive information we adopt is exact under a Gaussian assumption. Additionally, it can be computed without negative sampling. To reduce the degeneracy of the latent space extracted by powerful encoders and keep useful information from the inputs, we regularize predictive information learning with a challenging masked reconstruction loss. We demonstrate that our method recovers the latent space of noisy dynamical systems, extracts predictive features for forecasting tasks, and improves automatic speech recognition when used to pretrain the encoder on large amounts of unlabeled data.

Junwen Bai, Shufeng Kong, Carla Gomes

Multi-label classification is the challenging task of predicting the presence and absence of multiple targets, involving representation learning and label correlation modeling. We propose a novel framework for multi-label classification, Multivariate Probit Variational AutoEncoder (MPVAE), that effectively learns latent embedding spaces as well as label correlations. MPVAE learns and aligns two probabilistic embedding spaces for labels and features respectively. The decoder of MPVAE takes in the samples from the embedding spaces and models the joint distribution of output targets under a Multivariate Probit model by learning a shared covariance matrix. We show that MPVAE outperforms the existing state-of-the-art methods on a variety of application domains, using public real-world datasets. MPVAE is further shown to remain robust under noisy settings. Lastly, we demonstrate the interpretability of the learned covariance by a case study on a bird observation dataset.

Guandao Yang, Tianyi Zhang, Polina Kirichenko et al.

Low precision operations can provide scalability, memory savings, portability, and energy efficiency. This paper proposes SWALP, an approach to low precision training that averages low-precision SGD iterates with a modified learning rate schedule. SWALP is easy to implement and can match the performance of full-precision SGD even with all numbers quantized down to 8 bits, including the gradient accumulators. Additionally, we show that SWALP converges arbitrarily close to the optimal solution for quadratic objectives, and to a noise ball asymptotically smaller than low precision SGD in strongly convex settings.

Junwen Bai, Zihang Lai, Runzhe Yang et al.

Many real-world tasks involve identifying patterns from data satisfying background or prior knowledge. In domains like materials discovery, due to the flaws and biases in raw experimental data, the identification of X-ray diffraction patterns (XRD) often requires a huge amount of manual work in finding refined phases that are similar to the ideal theoretical ones. Automatically refining the raw XRDs utilizing the simulated theoretical data is thus desirable. We propose imitation refinement, a novel approach to refine imperfect input patterns, guided by a pre-trained classifier incorporating prior knowledge from simulated theoretical data, such that the refined patterns imitate the ideal data. The classifier is trained on the ideal simulated data to classify patterns and learns an embedding space where each class is represented by a prototype. The refiner learns to refine the imperfect patterns with small modifications, such that their embeddings are closer to the corresponding prototypes. We show that the refiner can be trained in both supervised and unsupervised fashions. We further illustrate the effectiveness of the proposed approach both qualitatively and quantitatively in a digit refinement task and an X-ray diffraction pattern refinement task in materials discovery.

Yexiang Xue, Junwen Bai, Ronan Le Bras et al.

High-Throughput materials discovery involves the rapid synthesis, measurement, and characterization of many different but structurally-related materials. A key problem in materials discovery, the phase map identification problem, involves the determination of the crystal phase diagram from the materials' composition and structural characterization data. We present Phase-Mapper, a novel AI platform to solve the phase map identification problem that allows humans to interact with both the data and products of AI algorithms, including the incorporation of human feedback to constrain or initialize solutions. Phase-Mapper affords incorporation of any spectral demixing algorithm, including our novel solver, AgileFD, which is based on a convolutive non-negative matrix factorization algorithm. AgileFD can incorporate constraints to capture the physics of the materials as well as human feedback. We compare three solver variants with previously proposed methods in a large-scale experiment involving 20 synthetic systems, demonstrating the efficacy of imposing physical constrains using AgileFD. Phase-Mapper has also been used by materials scientists to solve a wide variety of phase diagrams, including the previously unsolved Nb-Mn-V oxide system, which is provided here as an illustrative example.