Sarah Itani

Sarah Itani, Dorina Thanou

While the prevalence of Autism Spectrum Disorder (ASD) is increasing, research continues in an effort to identify common etiological and pathophysiological bases. In this regard, modern machine learning and network science pave the way for a better understanding of the neuropathology and the development of diagnosis aid systems. The present work addresses the classification of neurotypical and ASD subjects by combining knowledge about both the structure and the functional activity of the brain. In particular, we model the brain structure as a graph, and the resting-state functional MRI (rs-fMRI) signals as values that live on the nodes of that graph. We then borrow tools from the emerging field of Graph Signal Processing (GSP) to build features related to the frequency content of these signals. In order to make these features highly discriminative, we apply an extension of the Fukunaga-Koontz transform. Finally, we use these new markers to train a decision tree, an interpretable classification scheme, which results in a final diagnosis aid model. Interestingly, the resulting decision tree outperforms state-of-the-art methods on the publicly available Autism Brain Imaging Data Exchange (ABIDE) collection. Moreover, the analysis of the predictive markers reveals the influence of the frontal and temporal lobes in the diagnosis of the disorder, which is in line with previous findings in the literature of neuroscience. Our results indicate that exploiting jointly structural and functional information of the brain can reveal important information about the complexity of the neuropathology.

Sarah Itani, Fabian Lecron, Philippe Fortemps

One-class Classification (OCC) is an area of machine learning which addresses prediction based on unbalanced datasets. Basically, OCC algorithms achieve training by means of a single class sample, with potentially some additional counter-examples. The current OCC models give satisfaction in terms of performance, but there is an increasing need for the development of interpretable models. In the present work, we propose a one-class model which addresses concerns of both performance and interpretability. Our hybrid OCC method relies on density estimation as part of a tree-based learning algorithm, called One-Class decision Tree (OC-Tree). Within a greedy and recursive approach, our proposal rests on kernel density estimation to split a data subset on the basis of one or several intervals of interest. Thus, the OC-Tree encloses data within hyper-rectangles of interest which can be described by a set of rules. Against state-of-the-art methods such as Cluster Support Vector Data Description (ClusterSVDD), One-Class Support Vector Machine (OCSVM) and isolation Forest (iForest), the OC-Tree performs favorably on a range of benchmark datasets. Furthermore, we propose a real medical application for which the OC-Tree has demonstrated its effectiveness, through the ability to tackle interpretable diagnosis aid based on unbalanced datasets.