Rune Kok Nielsen

Rune Kok Nielsen, Andreas Nugaard Holm, Aasa Feragen

We study the effect of structural variation in graph data on the predictive performance of graph kernels. To this end, we introduce a novel, noise-robust adaptation of the GraphHopper kernel and validate it on benchmark data, obtaining modestly improved predictive performance on a range of datasets. Next, we investigate the performance of the state-of-the-art Weisfeiler-Lehman graph kernel under increasing synthetic structural errors and find that the effect of introducing errors depends strongly on the dataset.