Christian Richter

CE
3papers
231citations
Novelty20%
AI Score17

3 Papers

NAMay 16, 2018
A Randomized Multivariate Matrix Pencil Method for Superresolution Microscopy

Martin Ehler, Stefan Kunis, Thomas Peter et al.

The matrix pencil method is an eigenvalue based approach for the parameter identification of sparse exponential sums. We derive a reconstruction algorithm for multivariate exponential sums that is based on simultaneous diagonalization. Randomization is used and quantified to reduce the simultaneous diagonalization to the eigendecomposition of a single random matrix. To verify feasibility, the algorithm is applied to synthetic and experimental fluorescence microscopy data.

CEDec 30, 2016
GPU Accelerated Explicit Time Integration Methods for Electro-Quasistatic Fields

Christian Richter, Sebastian Schöps, Markus Clemens

Electro-quasistatic field problems involving nonlinear materials are commonly discretized in space using finite elements. In this paper, it is proposed to solve the resulting system of ordinary differential equations by an explicit Runge-Kutta-Chebyshev time-integration scheme. This mitigates the need for Newton-Raphson iterations, as they are necessary within fully implicit time integration schemes. However, the electro-quasistatic system of ordinary differential equations has a Laplace-type mass matrix such that parts of the explicit time-integration scheme remain implicit. An iterative solver with constant preconditioner is shown to efficiently solve the resulting multiple right-hand side problem. This approach allows an efficient parallel implementation on a system featuring multiple graphic processing units.

CVJun 18, 2018
Assessing robustness of radiomic features by image perturbation

Alex Zwanenburg, Stefan Leger, Linda Agolli et al.

Image features need to be robust against differences in positioning, acquisition and segmentation to ensure reproducibility. Radiomic models that only include robust features can be used to analyse new images, whereas models with non-robust features may fail to predict the outcome of interest accurately. Test-retest imaging is recommended to assess robustness, but may not be available for the phenotype of interest. We therefore investigated 18 methods to determine feature robustness based on image perturbations. Test-retest and perturbation robustness were compared for 4032 features that were computed from the gross tumour volume in two cohorts with computed tomography imaging: I) 31 non-small-cell lung cancer (NSCLC) patients; II): 19 head-and-neck squamous cell carcinoma (HNSCC) patients. Robustness was measured using the intraclass correlation coefficient (1,1) (ICC). Features with ICC$\geq0.90$ were considered robust. The NSCLC cohort contained more robust features for test-retest imaging than the HNSCC cohort ($73.5\%$ vs. $34.0\%$). A perturbation chain consisting of noise addition, affine translation, volume growth/shrinkage and supervoxel-based contour randomisation identified the fewest false positive robust features (NSCLC: $3.3\%$; HNSCC: $10.0\%$). Thus, this perturbation chain may be used to assess feature robustness.