Leanne S. Whitmore

Leanne S. Whitmore, Anthe George, Corey M. Hudson

In Random Forests, proximity distances are a metric representation of data into decision space. By observing how changes in input map to the movement of instances in this space we are able to determine the independent contribution of each feature to the decision-making process. For binary feature vectors, this process is fully specified. As these changes in input move particular instances nearer to the in-group or out-group, the independent contribution of each feature can be uncovered. Using this technique, we are able to calculate the contribution of each feature in determining how black-box decisions were made. This allows explication of the decision-making process, audit of the classifier, and post-hoc analysis of errors in classification.

Leanne S. Whitmore, Anthe George, Corey M. Hudson

In this work, we present an application of Locally Interpretable Machine-Agnostic Explanations to 2-D chemical structures. Using this framework we are able to provide a structural interpretation for an existing black-box model for classifying biologically produced fuel compounds with regard to Research Octane Number. This method of "painting" locally interpretable explanations onto 2-D chemical structures replicates the chemical intuition of synthetic chemists, allowing researchers in the field to directly accept, reject, inform and evaluate decisions underlying inscrutably complex quantitative structure-activity relationship models.