Arthur Kosmala

h-index2
2papers
11citations

2 Papers

24.3LGMar 8, 2023Code
Ewald-based Long-Range Message Passing for Molecular Graphs

Arthur Kosmala, Johannes Gasteiger, Nicholas Gao et al.

Neural architectures that learn potential energy surfaces from molecular data have undergone fast improvement in recent years. A key driver of this success is the Message Passing Neural Network (MPNN) paradigm. Its favorable scaling with system size partly relies upon a spatial distance limit on messages. While this focus on locality is a useful inductive bias, it also impedes the learning of long-range interactions such as electrostatics and van der Waals forces. To address this drawback, we propose Ewald message passing: a nonlocal Fourier space scheme which limits interactions via a cutoff on frequency instead of distance, and is theoretically well-founded in the Ewald summation method. It can serve as an augmentation on top of existing MPNN architectures as it is computationally inexpensive and agnostic to architectural details. We test the approach with four baseline models and two datasets containing diverse periodic (OC20) and aperiodic structures (OE62). We observe robust improvements in energy mean absolute errors across all models and datasets, averaging 10% on OC20 and 16% on OE62. Our analysis shows an outsize impact of these improvements on structures with high long-range contributions to the ground truth energy.

10.7CRMar 7, 2024
Unified Mechanism-Specific Amplification by Subsampling and Group Privacy Amplification

Jan Schuchardt, Mihail Stoian, Arthur Kosmala et al.

Amplification by subsampling is one of the main primitives in machine learning with differential privacy (DP): Training a model on random batches instead of complete datasets results in stronger privacy. This is traditionally formalized via mechanism-agnostic subsampling guarantees that express the privacy parameters of a subsampled mechanism as a function of the original mechanism's privacy parameters. We propose the first general framework for deriving mechanism-specific guarantees, which leverage additional information beyond these parameters to more tightly characterize the subsampled mechanism's privacy. Such guarantees are of particular importance for privacy accounting, i.e., tracking privacy over multiple iterations. Overall, our framework based on conditional optimal transport lets us derive existing and novel guarantees for approximate DP, accounting with Rényi DP, and accounting with dominating pairs in a unified, principled manner. As an application, we analyze how subsampling affects the privacy of groups of multiple users. Our tight mechanism-specific bounds outperform tight mechanism-agnostic bounds and classic group privacy results.