Ju Sun

Buyun Liang, Tim Mitchell, Ju Sun

Imposing explicit constraints is relatively new but increasingly pressing in deep learning, stimulated by, e.g., trustworthy AI that performs robust optimization over complicated perturbation sets and scientific applications that need to respect physical laws and constraints. However, it can be hard to reliably solve constrained deep learning problems without optimization expertise. The existing deep learning frameworks do not admit constraints. General-purpose optimization packages can handle constraints but do not perform auto-differentiation and have trouble dealing with nonsmoothness. In this paper, we introduce a new software package called NCVX, whose initial release contains the solver PyGRANSO, a PyTorch-enabled general-purpose optimization package for constrained machine/deep learning problems, the first of its kind. NCVX inherits auto-differentiation, GPU acceleration, and tensor variables from PyTorch, and is built on freely available and widely used open-source frameworks. NCVX is available at https://ncvx.org, with detailed documentation and numerous examples from machine/deep learning and other fields.

Zhong Zhuang, Taihui Li, Hengkang Wang et al.

Blind image deblurring (BID) has been extensively studied in computer vision and adjacent fields. Modern methods for BID can be grouped into two categories: single-instance methods that deal with individual instances using statistical inference and numerical optimization, and data-driven methods that train deep-learning models to deblur future instances directly. Data-driven methods can be free from the difficulty in deriving accurate blur models, but are fundamentally limited by the diversity and quality of the training data -- collecting sufficiently expressive and realistic training data is a standing challenge. In this paper, we focus on single-instance methods that remain competitive and indispensable. However, most such methods do not prescribe how to deal with unknown kernel size and substantial noise, precluding practical deployment. Indeed, we show that several state-of-the-art (SOTA) single-instance methods are unstable when the kernel size is overspecified, and/or the noise level is high. On the positive side, we propose a practical BID method that is stable against both, the first of its kind. Our method builds on the recent ideas of solving inverse problems by integrating the physical models and structured deep neural networks, without extra training data. We introduce several crucial modifications to achieve the desired stability. Extensive empirical tests on standard synthetic datasets, as well as real-world NTIRE2020 and RealBlur datasets, show the superior effectiveness and practicality of our BID method compared to SOTA single-instance as well as data-driven methods. The code of our method is available at: \url{https://github.com/sun-umn/Blind-Image-Deblurring}.

Sicheng Zhou, Nan Wang, Liwei Wang et al.

Objective: The generalizability of clinical large language models is usually ignored during the model development process. This study evaluated the generalizability of BERT-based clinical NLP models across different clinical settings through a breast cancer phenotype extraction task. Materials and Methods: Two clinical corpora of breast cancer patients were collected from the electronic health records from the University of Minnesota and the Mayo Clinic, and annotated following the same guideline. We developed three types of NLP models (i.e., conditional random field, bi-directional long short-term memory and CancerBERT) to extract cancer phenotypes from clinical texts. The models were evaluated for their generalizability on different test sets with different learning strategies (model transfer vs. locally trained). The entity coverage score was assessed with their association with the model performances. Results: We manually annotated 200 and 161 clinical documents at UMN and MC, respectively. The corpora of the two institutes were found to have higher similarity between the target entities than the overall corpora. The CancerBERT models obtained the best performances among the independent test sets from two clinical institutes and the permutation test set. The CancerBERT model developed in one institute and further fine-tuned in another institute achieved reasonable performance compared to the model developed on local data (micro-F1: 0.925 vs 0.932). Conclusions: The results indicate the CancerBERT model has the best learning ability and generalizability among the three types of clinical NLP models. The generalizability of the models was found to be correlated with the similarity of the target entities between the corpora.

Bhargav Joshi, Taihui Li, Buyun Liang et al.

The 75,848 lead tungstate crystals in CMS experiment at the CERN Large Hadron Collider are used to measure the energy of electrons and photons produced in the proton-proton collisions. The optical transparency of the crystals degrades slowly with radiation dose due to the beam-beam collisions. The transparency of each crystal is monitored with a laser monitoring system that tracks changes in the optical properties of the crystals due to radiation from the collision products. Predicting the optical transparency of the crystals, both in the short-term and in the long-term, is a critical task for the CMS experiment. We describe here the public data release, following FAIR principles, of the crystal monitoring data collected by the CMS Collaboration between 2016 and 2018. Besides describing the dataset and its access, the problems that can be addressed with it are described, as well as an example solution based on a Long Short-Term Memory neural network developed to predict future behavior of the crystals.

Zhong Zhuang, David Yang, Felix Hofmann et al.

Phase retrieval (PR) concerns the recovery of complex phases from complex magnitudes. We identify the connection between the difficulty level and the number and variety of symmetries in PR problems. We focus on the most difficult far-field PR (FFPR), and propose a novel method using double deep image priors. In realistic evaluation, our method outperforms all competing methods by large margins. As a single-instance method, our method requires no training data and minimal hyperparameter tuning, and hence enjoys good practicality.

Hengkang Wang, Han Lu, Ju Sun et al.

Technological advances have enabled the generation of unique and complementary types of data or views (e.g. genomics, proteomics, metabolomics) and opened up a new era in multiview learning research with the potential to lead to new biomedical discoveries. We propose iDeepViewLearn (Interpretable Deep Learning Method for Multiview Learning) for learning nonlinear relationships in data from multiple views while achieving feature selection. iDeepViewLearn combines deep learning flexibility with the statistical benefits of data and knowledge-driven feature selection, giving interpretable results. Deep neural networks are used to learn view-independent low-dimensional embedding through an optimization problem that minimizes the difference between observed and reconstructed data, while imposing a regularization penalty on the reconstructed data. The normalized Laplacian of a graph is used to model bilateral relationships between variables in each view, therefore, encouraging selection of related variables. iDeepViewLearn is tested on simulated and two real-world data, including breast cancer-related gene expression and methylation data. iDeepViewLearn had competitive classification results and identified genes and CpG sites that differentiated between individuals who died from breast cancer and those who did not. The results of our real data application and simulations with small to moderate sample sizes suggest that iDeepViewLearn may be a useful method for small-sample-size problems compared to other deep learning methods for multiview learning.

Hengyue Liang, Buyun Liang, Le Peng et al.

Empirical robustness evaluation (RE) of deep learning models against adversarial perturbations entails solving nontrivial constrained optimization problems. Existing numerical algorithms that are commonly used to solve them in practice predominantly rely on projected gradient, and mostly handle perturbations modeled by the $\ell_1$, $\ell_2$ and $\ell_\infty$ distances. In this paper, we introduce a novel algorithmic framework that blends a general-purpose constrained-optimization solver PyGRANSO with Constraint Folding (PWCF), which can add more reliability and generality to the state-of-the-art RE packages, e.g., AutoAttack. Regarding reliability, PWCF provides solutions with stationarity measures and feasibility tests to assess the solution quality. For generality, PWCF can handle perturbation models that are typically inaccessible to the existing projected gradient methods; the main requirement is the distance metric to be almost everywhere differentiable. Taking advantage of PWCF and other existing numerical algorithms, we further explore the distinct patterns in the solutions found for solving these optimization problems using various combinations of losses, perturbation models, and optimization algorithms. We then discuss the implications of these patterns on the current robustness evaluation and adversarial training.

Le Peng, Yash Travadi, Rui Zhang et al.

We propose performing imbalanced classification by regrouping majority classes into small classes so that we turn the problem into balanced multiclass classification. This new idea is dramatically different from popular loss reweighting and class resampling methods. Our preliminary result on imbalanced medical image classification shows that this natural idea can substantially boost the classification performance as measured by average precision (approximately area-under-the-precision-recall-curve, or AUPRC), which is more appropriate for evaluating imbalanced classification than other metrics such as balanced accuracy.

Yash Travadi, Le Peng, Xuan Bi et al.

Federated learning (FL) is a privacy-preserving learning technique that enables distributed computing devices to train shared learning models across data silos collaboratively. Existing FL works mostly focus on designing advanced FL algorithms to improve the model performance. However, the economic considerations of the clients, such as fairness and incentive, are yet to be fully explored. Without such considerations, self-motivated clients may lose interest and leave the federation. To address this problem, we designed a novel incentive mechanism that involves a client selection process to remove low-quality clients and a money transfer process to ensure a fair reward distribution. Our experimental results strongly demonstrate that the proposed incentive mechanism can effectively improve the duration and fairness of the federation.

Le Peng, Gaoxiang Luo, sicheng zhou et al.

Language models (LMs) such as BERT and GPT have revolutionized natural language processing (NLP). However, the medical field faces challenges in training LMs due to limited data access and privacy constraints imposed by regulations like the Health Insurance Portability and Accountability Act (HIPPA) and the General Data Protection Regulation (GDPR). Federated learning (FL) offers a decentralized solution that enables collaborative learning while ensuring data privacy. In this study, we evaluated FL on 2 biomedical NLP tasks encompassing 8 corpora using 6 LMs. Our results show that: 1) FL models consistently outperformed models trained on individual clients' data and sometimes performed comparably with models trained with polled data; 2) with the fixed number of total data, FL models training with more clients produced inferior performance but pre-trained transformer-based models exhibited great resilience. 3) FL models significantly outperformed large language models using zero-/one-shot learning and offered lightning inference speed.

Hengyue Liang, Buyun Liang, Ying Cui et al.

Empirical evaluation of deep learning models against adversarial attacks entails solving nontrivial constrained optimization problems. Popular algorithms for solving these constrained problems rely on projected gradient descent (PGD) and require careful tuning of multiple hyperparameters. Moreover, PGD can only handle $\ell_1$, $\ell_2$, and $\ell_\infty$ attack models due to the use of analytical projectors. In this paper, we introduce a novel algorithmic framework that blends a general-purpose constrained-optimization solver PyGRANSO, With Constraint-Folding (PWCF), to add reliability and generality to robustness evaluation. PWCF 1) finds good-quality solutions without the need of delicate hyperparameter tuning, and 2) can handle general attack models, e.g., general $\ell_p$ ($p \geq 0$) and perceptual attacks, which are inaccessible to PGD-based algorithms.

Taihui Li, Hengkang Wang, Peng Le et al.

Robust PCA is a standard tool for learning a linear subspace in the presence of sparse corruption or rare outliers. What about robustly learning manifolds that are more realistic models for natural data, such as images? There have been several recent attempts to generalize robust PCA to manifold settings. In this paper, we propose $\ell_1$- and scaling-invariant $\ell_1/\ell_2$-robust autoencoders based on a surprisingly compact formulation built on the intuition that deep autoencoders perform manifold learning. We demonstrate on several standard image datasets that the proposed formulation significantly outperforms all previous methods in collectively removing sparse corruption, without clean images for training. Moreover, we also show that the learned manifold structures can be generalized to unseen data samples effectively.

Hengyue Liang, Le Peng, Ju Sun

In selective classification (SC), a classifier abstains from making predictions that are likely to be wrong to avoid excessive errors. To deploy imperfect classifiers -- either due to intrinsic statistical noise of data or for robustness issue of the classifier or beyond -- in high-stakes scenarios, SC appears to be an attractive and necessary path to follow. Despite decades of research in SC, most previous SC methods still focus on the ideal statistical setting only, i.e., the data distribution at deployment is the same as that of training, although practical data can come from the wild. To bridge this gap, in this paper, we propose an SC framework that takes into account distribution shifts, termed generalized selective classification, that covers label-shifted (or out-of-distribution) and covariate-shifted samples, in addition to typical in-distribution samples, the first of its kind in the SC literature. We focus on non-training-based confidence-score functions for generalized SC on deep learning (DL) classifiers, and propose two novel margin-based score functions. Through extensive analysis and experiments, we show that our proposed score functions are more effective and reliable than the existing ones for generalized SC on a variety of classification tasks and DL classifiers. Code is available at https://github.com/sun-umn/sc_with_distshift.

Le Peng, Yash Travadi, Chuan He et al.

For classification with imbalanced class frequencies, i.e., imbalanced classification (IC), standard accuracy is known to be misleading as a performance measure. While most existing methods for IC resort to optimizing balanced accuracy (i.e., the average of class-wise recalls), they fall short in scenarios where the significance of classes varies or certain metrics should reach prescribed levels. In this paper, we study two key classification metrics, precision and recall, under three practical binary IC settings: fix precision optimize recall (FPOR), fix recall optimize precision (FROP), and optimize $F_β$-score (OFBS). Unlike existing methods that rely on smooth approximations to deal with the indicator function involved, \textit{we introduce, for the first time, exact constrained reformulations for these direct metric optimization (DMO) problems}, which can be effectively solved by exact penalty methods. Experiment results on multiple benchmark datasets demonstrate the practical superiority of our approach over the state-of-the-art methods for the three DMO problems. We also expect our exact reformulation and optimization (ERO) framework to be applicable to a wide range of DMO problems for binary IC and beyond. Our code is available at https://github.com/sun-umn/DMO.

Jiandong Chen, Lingjie Su, Le Peng et al.

Objective: The primary goal of this study was to systematically examine the impact of commonly used imbalance handling methods (IHMs) on predictive performance in biomedical binary classification, considering the interplay between model complexity and diverse data modalities. Material and Methods: We evaluated five representative IHMs: random undersampling (RUS), random oversampling (ROS), SMOTE, re-weighting (RW), and direct F1-score optimization (DMO), against a raw training (RAW) baseline. The evaluation encompassed three public biomedical datasets: MIMIC-III (tabular), ADE-Corpus-V2 (text), and MURA (image), spanning three common biomedical data modalities. To assess varying model complexity, we employed a range of architectures, from classical logistic regression and random forest to deep neural networks, including multilayer perceptron (MLP), BiLSTM, BERT, DenseNet, and DINOv2. Results: For simpler models such as logistic regression on tabular data, IHMs yielded no significant advantage over the RAW baseline, aligning with prior findings. However, clear benefits were observed for more complex models and unstructured data: (a) ROS and RW consistently enhanced the performance of powerful models; (b) direct F1-score optimization demonstrated utility primarily for unstructured text and image data; and (c) RUS and SMOTE consistently degraded performance and are therefore not recommended. Conclusion: The effectiveness of IHMs depends on both model complexity and data modality. Performance gains are most pronounced when leveraging appropriate IHMs, such as ROS, RW, and DMO, on high-complexity models.

Chuan He, Le Peng, Ju Sun

In practice, many machine learning (ML) problems come with constraints, and their applied domains involve distributed sensitive data that cannot be shared with others, e.g., in healthcare. Collaborative learning in such practical scenarios entails federated learning (FL) for ML problems with constraints, or FL with constraints for short. Despite the extensive developments of FL techniques in recent years, these techniques only deal with unconstrained FL problems or FL problems with simple constraints that are amenable to easy projections. There is little work dealing with FL problems with general constraints. To fill this gap, we take the first step toward building an algorithmic framework for solving FL problems with general constraints. In particular, we propose a new FL algorithm for constrained ML problems based on the proximal augmented Lagrangian (AL) method. Assuming convex objective and convex constraints plus other mild conditions, we establish the worst-case complexity of the proposed algorithm. Our numerical experiments show the effectiveness of our algorithm in performing Neyman-Pearson classification and fairness-aware learning with nonconvex constraints, in an FL setting.

Hengkang Wang, Taihui Li, Zhong Zhuang et al.

Deep image prior (DIP) and its variants have showed remarkable potential for solving inverse problems in computer vision, without any extra training data. Practical DIP models are often substantially overparameterized. During the fitting process, these models learn mostly the desired visual content first, and then pick up the potential modeling and observational noise, i.e., overfitting. Thus, the practicality of DIP often depends critically on good early stopping (ES) that captures the transition period. In this regard, the majority of DIP works for vision tasks only demonstrates the potential of the models -- reporting the peak performance against the ground truth, but provides no clue about how to operationally obtain near-peak performance without access to the groundtruth. In this paper, we set to break this practicality barrier of DIP, and propose an efficient ES strategy, which consistently detects near-peak performance across several vision tasks and DIP variants. Based on a simple measure of dispersion of consecutive DIP reconstructions, our ES method not only outpaces the existing ones -- which only work in very narrow domains, but also remains effective when combined with a number of methods that try to mitigate the overfitting. The code is available at https://github.com/sun-umn/Early_Stopping_for_DIP.

Buyun Liang, Tim Mitchell, Ju Sun

Optimizing nonconvex (NCVX) problems, especially nonsmooth and constrained ones, is an essential part of machine learning. However, it can be hard to reliably solve such problems without optimization expertise. Existing general-purpose NCVX optimization packages are powerful but typically cannot handle nonsmoothness. GRANSO is among the first optimization solvers targeting general nonsmooth NCVX problems with nonsmooth constraints, but, as it is implemented in MATLAB and requires the user to provide analytical gradients, GRANSO is often not a convenient choice in machine learning (especially deep learning) applications. To greatly lower the technical barrier, we introduce a new software package called NCVX, whose initial release contains the solver PyGRANSO, a PyTorch-enabled port of GRANSO incorporating auto-differentiation, GPU acceleration, tensor input, and support for new QP solvers. NCVX is built on freely available and widely used open-source frameworks, and as a highlight, can solve general constrained deep learning problems, the first of its kind. NCVX is available at https://ncvx.org, with detailed documentation and numerous examples from machine learning and other fields.

Taihui Li, Zhong Zhuang, Hengyue Liang et al.

Recent works have shown the surprising effectiveness of deep generative models in solving numerous image reconstruction (IR) tasks, even without training data. We call these models, such as deep image prior and deep decoder, collectively as single-instance deep generative priors (SIDGPs). The successes, however, often hinge on appropriate early stopping (ES), which by far has largely been handled in an ad-hoc manner. In this paper, we propose the first principled method for ES when applying SIDGPs to IR, taking advantage of the typical bell trend of the reconstruction quality. In particular, our method is based on collaborative training and self-validation: the primal reconstruction process is monitored by a deep autoencoder, which is trained online with the historic reconstructed images and used to validate the reconstruction quality constantly. Experimentally, on several IR problems and different SIDGPs, our self-validation method is able to reliably detect near-peak performance and signal good ES points. Our code is available at https://sun-umn.github.io/Self-Validation/.

Le Peng, Hengyue Liang, Gaoxiang Luo et al.

Transfer learning (TL) from pretrained deep models is a standard practice in modern medical image classification (MIC). However, what levels of features to be reused are problem-dependent, and uniformly finetuning all layers of pretrained models may be suboptimal. This insight has partly motivated the recent differential TL strategies, such as TransFusion (TF) and layer-wise finetuning (LWFT), which treat the layers in the pretrained models differentially. In this paper, we add one more strategy into this family, called TruncatedTL, which reuses and finetunes appropriate bottom layers and directly discards the remaining layers. This yields not only superior MIC performance but also compact models for efficient inference, compared to other differential TL methods. Our code is available at: https://github.com/sun-umn/TTL

Hengyue Liang, Taihui Li, Ju Sun

Image watermarks have been considered a promising technique to help detect AI-generated content, which can be used to protect copyright or prevent fake image abuse. In this work, we present a black-box method for removing invisible image watermarks, without the need of any dataset of watermarked images or any knowledge about the watermark system. Our approach is simple to implement: given a single watermarked image, we regress it by deep image prior (DIP). We show that from the intermediate steps of DIP one can reliably find an evasion image that can remove invisible watermarks while preserving high image quality. Due to its unique working mechanism and practical effectiveness, we advocate including DIP as a baseline invasion method for benchmarking the robustness of watermarking systems. Finally, by showing the limited ability of DIP and other existing black-box methods in evading training-based visible watermarks, we discuss the positive implications on the practical use of training-based visible watermarks to prevent misinformation abuse.

Wenjie Zhang, Yuxiang Wan, Zhong Zhuang et al.

For nonlinear inverse problems that are prevalent in imaging science, symmetries in the forward model are common. When data-driven deep learning approaches are used to solve such problems, these intrinsic symmetries can cause substantial learning difficulties. In this paper, we explain how such difficulties arise and, more importantly, how to overcome them by preprocessing the training set before any learning, i.e., symmetry breaking. We take far-field phase retrieval (FFPR), which is central to many areas of scientific imaging, as an example and show that symmetric breaking can substantially improve data-driven learning. We also formulate the mathematical principle of symmetry breaking.

Hengkang Wang, Yang Liu, Huidong Liu et al.

Video restoration (VR) aims to recover high-quality videos from degraded ones. Although recent zero-shot VR methods using pre-trained diffusion models (DMs) show good promise, they suffer from approximation errors during reverse diffusion and insufficient temporal consistency. Moreover, dealing with 3D video data, VR is inherently computationally intensive. In this paper, we advocate viewing the reverse process in DMs as a function and present a novel Maximum a Posterior (MAP) framework that directly parameterizes video frames in the seed space of DMs, eliminating approximation errors. We also introduce strategies to promote bilevel temporal consistency: semantic consistency by leveraging clustering structures in the seed space, and pixel-level consistency by progressive warping with optical flow refinements. Extensive experiments on multiple virtual reality tasks demonstrate superior visual quality and temporal consistency achieved by our method compared to the state-of-the-art.

Yuxiang Wan, Ryan Devera, Wenjie Zhang et al.

We present FMPlug, a novel plug-in framework that enhances foundation flow-matching (FM) priors for solving ill-posed inverse problems. Unlike traditional approaches that rely on domain-specific or untrained priors, FMPlug smartly leverages two simple but powerful insights: the similarity between observed and desired objects and the Gaussianity of generative flows. By introducing a time-adaptive warm-up strategy and sharp Gaussianity regularization, FMPlug unlocks the true potential of domain-agnostic foundation models. Our method beats state-of-the-art methods that use foundation FM priors by significant margins, on image super-resolution and Gaussian deblurring.

Yuxiang Wan, Ryan Devera, Wenjie Zhang et al.

Foundation flow-matching (FM) models promise a universal prior for solving inverse problems (IPs), yet today they trail behind domain-specific or even untrained priors. How can we unlock their potential? We introduce FMPlug, a plug-in framework that redefines how foundation FMs are used in IPs. FMPlug combines an instance-guided, time-dependent warm-start strategy with a sharp Gaussianity regularization, adding problem-specific guidance while preserving the Gaussian structures. This leads to a significant performance boost across image restoration and scientific IPs. Our results point to a path for making foundation FM models practical, reusable priors for IP solving.

Kshitij Tayal, Raunak Manekar, Zhong Zhuang et al.

Several deep learning methods for phase retrieval exist, but most of them fail on realistic data without precise support information. We propose a novel method based on single-instance deep generative prior that works well on complex-valued crystal data.

Ju Sun, Le Peng, Taihui Li et al.

Importance: An artificial intelligence (AI)-based model to predict COVID-19 likelihood from chest x-ray (CXR) findings can serve as an important adjunct to accelerate immediate clinical decision making and improve clinical decision making. Despite significant efforts, many limitations and biases exist in previously developed AI diagnostic models for COVID-19. Utilizing a large set of local and international CXR images, we developed an AI model with high performance on temporal and external validation. Conclusions and Relevance: AI-based diagnostic tools may serve as an adjunct, but not replacement, for clinical decision support of COVID-19 diagnosis, which largely hinges on exposure history, signs, and symptoms. While AI-based tools have not yet reached full diagnostic potential in COVID-19, they may still offer valuable information to clinicians taken into consideration along with clinical signs and symptoms.

Kshitij Tayal, Chieh-Hsin Lai, Vipin Kumar et al.

In many physical systems, inputs related by intrinsic system symmetries are mapped to the same output. When inverting such systems, i.e., solving the associated inverse problems, there is no unique solution. This causes fundamental difficulties for deploying the emerging end-to-end deep learning approach. Using the generalized phase retrieval problem as an illustrative example, we show that careful symmetry breaking on the training data can help get rid of the difficulties and significantly improve the learning performance. We also extract and highlight the underlying mathematical principle of the proposed solution, which is directly applicable to other inverse problems.

David A. Barmherzig, Ju Sun, Emmanuel J. Candès et al.

A new reference design is introduced for holographic coherent diffraction imaging. This consists in two references - "block" and "pinhole" shaped regions - placed adjacent to the imaging specimen. An efficient recovery algorithm is provided for the resulting holographic phase retrieval problem, which is based on solving a structured, overdetermined linear system. Analysis of the expected recovery error on noisy data, which is contaminated by Poisson shot noise, shows that this simple modification synergizes the individual references and hence leads to uniformly superior performance over single-reference schemes. Numerical experiments on simulated data confirm the theoretical prediction, and the proposed dual-reference scheme achieves a smaller recovery error than leading single-reference schemes.

Yu Bai, Qijia Jiang, Ju Sun

This paper concerns dictionary learning, i.e., sparse coding, a fundamental representation learning problem. We show that a subgradient descent algorithm, with random initialization, can provably recover orthogonal dictionaries on a natural nonsmooth, nonconvex $\ell_1$ minimization formulation of the problem, under mild statistical assumptions on the data. This is in contrast to previous provable methods that require either expensive computation or delicate initialization schemes. Our analysis develops several tools for characterizing landscapes of nonsmooth functions, which might be of independent interest for provable training of deep networks with nonsmooth activations (e.g., ReLU), among numerous other applications. Preliminary experiments corroborate our analysis and show that our algorithm works well empirically in recovering orthogonal dictionaries.

Li Shen, Congliang Chen, Fangyu Zou et al.

Integrating adaptive learning rate and momentum techniques into SGD leads to a large class of efficiently accelerated adaptive stochastic algorithms, such as AdaGrad, RMSProp, Adam, AccAdaGrad, \textit{etc}. In spite of their effectiveness in practice, there is still a large gap in their theories of convergences, especially in the difficult non-convex stochastic setting. To fill this gap, we propose \emph{weighted AdaGrad with unified momentum}, dubbed AdaUSM, which has the main characteristics that (1) it incorporates a unified momentum scheme which covers both the heavy ball momentum and the Nesterov accelerated gradient momentum; (2) it adopts a novel weighted adaptive learning rate that can unify the learning rates of AdaGrad, AccAdaGrad, Adam, and RMSProp. Moreover, when we take polynomially growing weights in AdaUSM, we obtain its $\mathcal{O}(\log(T)/\sqrt{T})$ convergence rate in the non-convex stochastic setting. We also show that the adaptive learning rates of Adam and RMSProp correspond to taking exponentially growing weights in AdaUSM, thereby providing a new perspective for understanding Adam and RMSProp. Lastly, comparative experiments of AdaUSM against SGD with momentum, AdaGrad, AdaEMA, Adam, and AMSGrad on various deep learning models and datasets are also carried out.

Sky C. Cheung, John Y. Shin, Yenson Lau et al.

Modern high-resolution microscopes, such as the scanning tunneling microscope, are commonly used to study specimens that have dense and aperiodic spatial structure. Extracting meaningful information from images obtained from such microscopes remains a formidable challenge. Fourier analysis is commonly used to analyze the underlying structure of fundamental motifs present in an image. However, the Fourier transform fundamentally suffers from severe phase noise when applied to aperiodic images. Here, we report the development of a new algorithm based on nonconvex optimization, applicable to any microscopy modality, that directly uncovers the fundamental motifs present in a real-space image. Apart from being quantitatively superior to traditional Fourier analysis, we show that this novel algorithm also uncovers phase sensitive information about the underlying motif structure. We demonstrate its usefulness by studying scanning tunneling microscopy images of a Co-doped iron arsenide superconductor and prove that the application of the algorithm allows for the complete recovery of quasiparticle interference in this material. Our phase sensitive quasiparticle interference imaging results indicate that the pairing symmetry in optimally doped NaFeAs is consistent with a sign-changing s+- order parameter.

David Barmherzig, Ju Sun

While convergence of the Alternating Direction Method of Multipliers (ADMM) on convex problems is well studied, convergence on nonconvex problems is only partially understood. In this paper, we consider the Gaussian phase retrieval problem, formulated as a linear constrained optimization problem with a biconvex objective. The particular structure allows for a novel application of the ADMM. It can be shown that the dual variable is zero at the global minimizer. This motivates the analysis of a block coordinate descent algorithm, which is equivalent to the ADMM with the dual variable fixed to be zero. We show that the block coordinate descent algorithm converges to the global minimizer at a linear rate, when starting from a deterministically achievable initialization point.

Ju Sun, Qing Qu, John Wright

Can we recover a complex signal from its Fourier magnitudes? More generally, given a set of $m$ measurements, $y_k = |\mathbf a_k^* \mathbf x|$ for $k = 1, \dots, m$, is it possible to recover $\mathbf x \in \mathbb{C}^n$ (i.e., length-$n$ complex vector)? This **generalized phase retrieval** (GPR) problem is a fundamental task in various disciplines, and has been the subject of much recent investigation. Natural nonconvex heuristics often work remarkably well for GPR in practice, but lack clear theoretical explanations. In this paper, we take a step towards bridging this gap. We prove that when the measurement vectors $\mathbf a_k$'s are generic (i.i.d. complex Gaussian) and the number of measurements is large enough ($m \ge C n \log^3 n$), with high probability, a natural least-squares formulation for GPR has the following benign geometric structure: (1) there are no spurious local minimizers, and all global minimizers are equal to the target signal $\mathbf x$, up to a global phase; and (2) the objective function has a negative curvature around each saddle point. This structure allows a number of iterative optimization methods to efficiently find a global minimizer, without special initialization. To corroborate the claim, we describe and analyze a second-order trust-region algorithm.

Ju Sun, Qing Qu, John Wright

We consider the problem of recovering a complete (i.e., square and invertible) matrix $\mathbf A_0$, from $\mathbf Y \in \mathbb{R}^{n \times p}$ with $\mathbf Y = \mathbf A_0 \mathbf X_0$, provided $\mathbf X_0$ is sufficiently sparse. This recovery problem is central to theoretical understanding of dictionary learning, which seeks a sparse representation for a collection of input signals and finds numerous applications in modern signal processing and machine learning. We give the first efficient algorithm that provably recovers $\mathbf A_0$ when $\mathbf X_0$ has $O(n)$ nonzeros per column, under suitable probability model for $\mathbf X_0$. Our algorithmic pipeline centers around solving a certain nonconvex optimization problem with a spherical constraint, and hence is naturally phrased in the language of manifold optimization. In a companion paper (arXiv:1511.03607), we have showed that with high probability our nonconvex formulation has no "spurious" local minimizers and around any saddle point the objective function has a negative directional curvature. In this paper, we take advantage of the particular geometric structure, and describe a Riemannian trust region algorithm that provably converges to a local minimizer with from arbitrary initializations. Such minimizers give excellent approximations to rows of $\mathbf X_0$. The rows are then recovered by linear programming rounding and deflation.

Ju Sun, Qing Qu, John Wright

We consider the problem of recovering a complete (i.e., square and invertible) matrix $\mathbf A_0$, from $\mathbf Y \in \mathbb{R}^{n \times p}$ with $\mathbf Y = \mathbf A_0 \mathbf X_0$, provided $\mathbf X_0$ is sufficiently sparse. This recovery problem is central to theoretical understanding of dictionary learning, which seeks a sparse representation for a collection of input signals and finds numerous applications in modern signal processing and machine learning. We give the first efficient algorithm that provably recovers $\mathbf A_0$ when $\mathbf X_0$ has $O(n)$ nonzeros per column, under suitable probability model for $\mathbf X_0$. In contrast, prior results based on efficient algorithms either only guarantee recovery when $\mathbf X_0$ has $O(\sqrt{n})$ zeros per column, or require multiple rounds of SDP relaxation to work when $\mathbf X_0$ has $O(n^{1-δ})$ nonzeros per column (for any constant $δ\in (0, 1)$). } Our algorithmic pipeline centers around solving a certain nonconvex optimization problem with a spherical constraint. In this paper, we provide a geometric characterization of the objective landscape. In particular, we show that the problem is highly structured: with high probability, (1) there are no "spurious" local minimizers; and (2) around all saddle points the objective has a negative directional curvature. This distinctive structure makes the problem amenable to efficient optimization algorithms. In a companion paper (arXiv:1511.04777), we design a second-order trust-region algorithm over the sphere that provably converges to a local minimizer from arbitrary initializations, despite the presence of saddle points.

Ju Sun, Qing Qu, John Wright

In this note, we focus on smooth nonconvex optimization problems that obey: (1) all local minimizers are also global; and (2) around any saddle point or local maximizer, the objective has a negative directional curvature. Concrete applications such as dictionary learning, generalized phase retrieval, and orthogonal tensor decomposition are known to induce such structures. We describe a second-order trust-region algorithm that provably converges to a global minimizer efficiently, without special initializations. Finally we highlight alternatives, and open problems in this direction.

Ju Sun, Qing Qu, John Wright

We consider the problem of recovering a complete (i.e., square and invertible) matrix $\mathbf A_0$, from $\mathbf Y \in \mathbb R^{n \times p}$ with $\mathbf Y = \mathbf A_0 \mathbf X_0$, provided $\mathbf X_0$ is sufficiently sparse. This recovery problem is central to the theoretical understanding of dictionary learning, which seeks a sparse representation for a collection of input signals, and finds numerous applications in modern signal processing and machine learning. We give the first efficient algorithm that provably recovers $\mathbf A_0$ when $\mathbf X_0$ has $O(n)$ nonzeros per column, under suitable probability model for $\mathbf X_0$. In contrast, prior results based on efficient algorithms provide recovery guarantees when $\mathbf X_0$ has only $O(n^{1-δ})$ nonzeros per column for any constant $δ\in (0, 1)$. Our algorithmic pipeline centers around solving a certain nonconvex optimization problem with a spherical constraint, and hence is naturally phrased in the language of manifold optimization. To show this apparently hard problem is tractable, we first provide a geometric characterization of the high-dimensional objective landscape, which shows that with high probability there are no "spurious" local minima. This particular geometric structure allows us to design a Riemannian trust region algorithm over the sphere that provably converges to one local minimizer with an arbitrary initialization, despite the presence of saddle points. The geometric approach we develop here may also shed light on other problems arising from nonconvex recovery of structured signals.

Qing Qu, Ju Sun, John Wright

Is it possible to find the sparsest vector (direction) in a generic subspace $\mathcal{S} \subseteq \mathbb{R}^p$ with $\mathrm{dim}(\mathcal{S})= n < p$? This problem can be considered a homogeneous variant of the sparse recovery problem, and finds connections to sparse dictionary learning, sparse PCA, and many other problems in signal processing and machine learning. In this paper, we focus on a **planted sparse model** for the subspace: the target sparse vector is embedded in an otherwise random subspace. Simple convex heuristics for this planted recovery problem provably break down when the fraction of nonzero entries in the target sparse vector substantially exceeds $O(1/\sqrt{n})$. In contrast, we exhibit a relatively simple nonconvex approach based on alternating directions, which provably succeeds even when the fraction of nonzero entries is $Ω(1)$. To the best of our knowledge, this is the first practical algorithm to achieve linear scaling under the planted sparse model. Empirically, our proposed algorithm also succeeds in more challenging data models, e.g., sparse dictionary learning.

Ju Sun, Yuqian Zhang, John Wright

Motivated by vision tasks such as robust face and object recognition, we consider the following general problem: given a collection of low-dimensional linear subspaces in a high-dimensional ambient (image) space, and a query point (image), efficiently determine the nearest subspace to the query in $\ell^1$ distance. In contrast to the naive exhaustive search which entails large-scale linear programs, we show that the computational burden can be cut down significantly by a simple two-stage algorithm: (1) projecting the query and data-base subspaces into lower-dimensional space by random Cauchy matrix, and solving small-scale distance evaluations (linear programs) in the projection space to locate candidate nearest; (2) with few candidates upon independent repetition of (1), getting back to the high-dimensional space and performing exhaustive search. To preserve the identity of the nearest subspace with nontrivial probability, the projection dimension typically is low-order polynomial of the subspace dimension multiplied by logarithm of number of the subspaces (Theorem 2.1). The reduced dimensionality and hence complexity renders the proposed algorithm particularly relevant to vision application such as robust face and object instance recognition that we investigate empirically.