Pierre Nugues

Pierre Nugues

The \textit{Petit Larousse illustré} is a French dictionary first published in 1905. Its division in two main parts on language and on history and geography corresponds to a major milestone in French lexicography as well as a repository of general knowledge from this period. Although the value of many entries from 1905 remains intact, some descriptions now have a dimension that is more historical than contemporary. They are nonetheless significant to analyze and understand cultural representations from this time. A comparison with more recent information or a verification of these entries would require a tedious manual work. In this paper, we describe a new lexical resource, where we connected all the dictionary entries of the history and geography part to current data sources. For this, we linked each of these entries to a wikidata identifier. Using the wikidata links, we can automate more easily the identification, comparison, and verification of historically-situated representations. We give a few examples on how to process wikidata identifiers and we carried out a small analysis of the entities described in the dictionary to outline possible applications. The resource, i.e. the annotation of 20,245 dictionary entries with wikidata links, is available from GitHub url{https://github.com/pnugues/petit_larousse_1905/

Rafsan Ahmed, Petter Berntsson, Alexander Skafte et al.

Background Medical and life science research generates millions of publications, and it is a great challenge for researchers to utilize this information in full since its scale and complexity greatly surpasses human reading capabilities. Automated text mining can help extract and connect information spread across this large body of literature, but this technology is not easily accessible to life scientists. Methods and Results Here, we developed an easy-to-use end-to-end pipeline for deep learning- and dictionary-based named entity recognition (NER) of typical entities found in medical and life science research articles, including diseases, cells, chemicals, genes/proteins, species and others. The pipeline can access and process large medical research article collections (PubMed, CORD-19) or raw text and incorporates a series of deep learning models fine-tuned on the HUNER corpora collection. In addition, the pipeline can perform dictionary-based NER related to COVID-19 and other medical topics. Users can also load their own NER models and dictionaries to include additional entities. The output consists of publication-ready ranked lists and graphs of detected entities and files containing the annotated texts. In addition, we provide two accessory scripts which allow processing of files in PubTator format and rapid inspection of the results for specific entities of interest. As model use cases, the pipeline was deployed on two collections of autophagy-related abstracts from PubMed and on the CORD19 dataset, a collection of 764 398 research article abstracts related to COVID-19. Conclusions The NER pipeline we present is applicable in a variety of medical research settings and makes customizable text mining accessible to life scientists.

Robin Baki Davidsson, Pierre Nugues

Recent advancements in large language models (LLMs) have shown their remarkable capacities in many NLP tasks. However, their substantial size often presents challenges for deployment. This necessitates efficient techniques for model compression, with quantization emerging as a prominent solution. Despite its benefits, the exact impact of quantization (from 2- to 6-bit) on the performance and accuracy of LLMs remains an active area of research. This paper investigates the performance of eight LLMs at various quantization levels, focusing on tasks such as MMLU-Pro for knowledge processing and reasoning, CRUXEval for code comprehension, and MuSR for reading comprehension. Our results show a consistent trend where higher precision (e.g., 8-bit Q8\_0) yields improved performance, albeit with diminishing returns. Aggressive quantization (e.g., 2-bit Q2\_K) usually retains acceptable accuracy, though some models show a substantial loss in performance. Our findings indicate that while lower bit precision generally reduces performance, the impact varies across models and tasks. Larger models show greater resilience to aggressive quantization, but can still undergo significant drops at lower precision levels. Mid-sized models in the 7-9 billion parameter range strike an optimal balance between efficiency and resource usage. Such results provide insights into the trade-offs between model size, quantization, and performance.

Simon Börjesson, Erik Ersmark, Pierre Nugues

The \textit{Nordisk familjebok} is a Swedish encyclopedia from the 19th and 20th centuries. It was written by a team of experts and aimed to be an intellectual reference, stressing precision and accuracy. This encyclopedia had four main editions remarkable by their size, ranging from 20 to 38 volumes. As a consequence, the \textit{Nordisk familjebok} had a considerable influence in universities, schools, the media, and society overall. As new editions were released, the selection of entries and their content evolved, reflecting intellectual changes in Sweden. In this paper, we used digitized versions from \textit{Project Runeberg}. We first resegmented the raw text into entries and matched pairs of entries between the first and second editions using semantic sentence embeddings. We then extracted the geographical entries from both editions using a transformer-based classifier and linked them to Wikidata. This enabled us to identify geographic trends and possible shifts between the first and second editions, written between 1876-1899 and 1904-1926, respectively. Interpreting the results, we observe a small but significant shift in geographic focus away from Europe and towards North America, Africa, Asia, Australia, and northern Scandinavia from the first to the second edition, confirming the influence of the First World War and the rise of new powers. The code and data are available on GitHub at https://github.com/sibbo/nordisk-familjebok.

Pierre Nugues

Diderot's \textit{Encyclopédie} is a reference work from XVIIIth century in Europe that aimed at collecting the knowledge of its era. \textit{Wikipedia} has the same ambition with a much greater scope. However, the lack of digital connection between the two encyclopedias may hinder their comparison and the study of how knowledge has evolved. A key element of \textit{Wikipedia} is Wikidata that backs the articles with a graph of structured data. In this paper, we describe the annotation of more than 10,300 of the \textit{Encyclopédie} entries with Wikidata identifiers enabling us to connect these entries to the graph. We considered geographic and human entities. The \textit{Encyclopédie} does not contain biographic entries as they mostly appear as subentries of locations. We extracted all the geographic entries and we completely annotated all the entries containing a description of human entities. This represents more than 2,600 links referring to locations or human entities. In addition, we annotated more than 9,500 entries having a geographic content only. We describe the annotation process as well as application examples. This resource is available at https://github.com/pnugues/encyclopedie_1751

Albin Andersson, Salam Jonasson, Fredrik Wastring et al.

The digitization of old encyclopedias represents an important step to improve access to historically structured knowledge. Often, however, this process does not go beyond an optical character recognition, leaving all the underlying structure unexploited. In addition, many encyclopedias had multiple editions reflecting the evolution of knowledge. The lack of structure in the raw text makes it difficult to track changes across these editions. In this work, we built a pipeline to restore the text structure, where we extract the headwords and identify entries; categorize the entities; match entries across editions; and link entries to a Wikidata item. We applied this pipeline to the four major editions of \textit{Nordisk familjebok}, an authoritative Swedish encyclopedia published between 1876 and 1951. We could extract the headwords with an F1 score of 97.8\% and we obtained an F1 score of 93.4\% on the headword classification. On a small-scale evaluation, we reached a 93\% precision on the cross-edition matching, 85\% precision and 16.5\% recall on the Wikidata linking. This shows that an automated approach to digitized historical knowledge is possible. This should facilitate the preservation of general knowledge and the understanding of knowledge transmission. The datasets and programs are available online.

Axel Ahlin, Alfred Myrne, Pierre Nugues

In this paper, we describe the extraction of all the location entries from a prominent Swedish encyclopedia from the early 20th century, the \textit{Nordisk Familjebok} `Nordic Family Book.' We focused on the second edition called \textit{Uggleupplagan}, which comprises 38 volumes and over 182,000 articles. This makes it one of the most extensive Swedish encyclopedias. Using a classifier, we first determined the category of the entries. We found that approximately 22 percent of them were locations. We applied a named entity recognition to these entries and we linked them to Wikidata. Wikidata enabled us to extract their precise geographic locations resulting in almost 18,000 valid coordinates. We then analyzed the distribution of these locations and the entry selection process. It showed a higher density within Sweden, Germany, and the United Kingdom. The paper sheds light on the selection and representation of geographic information in the \textit{Nordisk Familjebok}, providing insights into historical and societal perspectives. It also paves the way for future investigations into entry selection in different time periods and comparative analyses among various encyclopedias.

Marcus Klang, Firas Dib, Pierre Nugues

Ugglan is a system designed to discover named entities and link them to unique identifiers in a knowledge base. It is based on a combination of a name and nominal dictionary derived from Wikipedia and Wikidata, a named entity recognition module (NER) using fixed ordinally-forgetting encoding (FOFE) trained on the TAC EDL data from 2014-2016, a candidate generation module from the Wikipedia link graph across multiple editions, a PageRank link and cooccurrence graph disambiguator, and finally a reranker trained on the TAC EDL 2015-2016 data.