Ran Bakalo

2papers

2 Papers

CVApr 29, 2019
Weakly and Semi Supervised Detection in Medical Imaging via Deep Dual Branch Net

Ran Bakalo, Jacob Goldberger, Rami Ben-Ari

This study presents a novel deep learning architecture for multi-class classification and localization of abnormalities in medical imaging illustrated through experiments on mammograms. The proposed network combines two learning branches. One branch is for region classification with a newly added normal-region class. Second branch is region detection branch for ranking regions relative to one another. Our method enables detection of abnormalities at full mammogram resolution for both weakly and semi-supervised settings. A novel objective function allows for the incorporation of local annotations into the model. We present the impact of our schemes on several performance measures for classification and localization, to evaluate the cost effectiveness of the lesion annotation effort. Our evaluation was primarily conducted over a large multi-center mammography dataset of $\sim$3,000 mammograms with various findings. The results for weakly supervised learning showed significant improvement compared to previous approaches. We show that the time consuming local annotations involved in supervised learning can be addressed by a weakly supervised method that can leverage a subset of locally annotated data. Weakly and semi-supervised methods coupled with detection can produce a cost effective and explainable model to be adopted by radiologists in the field.

CVApr 28, 2019
Classification and Detection in Mammograms with Weak Supervision via Dual Branch Deep Neural Net

Ran Bakalo, Rami Ben-Ari, Jacob Goldberger

The high cost of generating expert annotations, poses a strong limitation for supervised machine learning methods in medical imaging. Weakly supervised methods may provide a solution to this tangle. In this study, we propose a novel deep learning architecture for multi-class classification of mammograms according to the severity of their containing anomalies, having only a global tag over the image. The suggested scheme further allows localization of the different types of findings in full resolution. The new scheme contains a dual branch network that combines region-level classification with region ranking. We evaluate our method on a large multi-center mammography dataset including $\sim$3,000 mammograms with various anomalies and demonstrate the advantages of the proposed method over a previous weakly-supervised strategy.