Yijing Xie

h-index12
2papers
818citations

2 Papers

8.3CLNov 16, 2025Code
BioMedJImpact: A Comprehensive Dataset and LLM Pipeline for AI Engagement and Scientific Impact Analysis of Biomedical Journals

Ruiyu Wang, Yuzhang Xie, Xiao Hu et al.

Assessing journal impact is central to scholarly communication, yet existing open resources rarely capture how collaboration structures and artificial intelligence (AI) research jointly shape venue prestige in biomedicine. We present BioMedJImpact, a large-scale, biomedical-oriented dataset designed to advance journal-level analysis of scientific impact and AI engagement. Built from 1.74 million PubMed Central articles across 2,744 journals, BioMedJImpact integrates bibliometric indicators, collaboration features, and LLM-derived semantic indicators for AI engagement. Specifically, the AI engagement feature is extracted through a reproducible three-stage LLM pipeline that we propose. Using this dataset, we analyze how collaboration intensity and AI engagement jointly influence scientific impact across pre- and post-pandemic periods (2016-2019, 2020-2023). Two consistent trends emerge: journals with higher collaboration intensity, particularly those with larger and more diverse author teams, tend to achieve greater citation impact, and AI engagement has become an increasingly strong correlate of journal prestige, especially in quartile rankings. To further validate the three-stage LLM pipeline we proposed for deriving the AI engagement feature, we conduct human evaluation, confirming substantial agreement in AI relevance detection and consistent subfield classification. Together, these contributions demonstrate that BioMedJImpact serves as both a comprehensive dataset capturing the intersection of biomedicine and AI, and a validated methodological framework enabling scalable, content-aware scientometric analysis of scientific impact and innovation dynamics. Code is available at https://github.com/JonathanWry/BioMedJImpact.

3.6CVJul 10, 2025Code
X-RAFT: Cross-Modal Non-Rigid Registration of Blue and White Light Neurosurgical Hyperspectral Images

Charlie Budd, Silvère Ségaud, Matthew Elliot et al.

Integration of hyperspectral imaging into fluorescence-guided neurosurgery has the potential to improve surgical decision making by providing quantitative fluorescence measurements in real-time. Quantitative fluorescence requires paired spectral data in fluorescence (blue light) and reflectance (white light) mode. Blue and white image acquisition needs to be performed sequentially in a potentially dynamic surgical environment. A key component to the fluorescence quantification process is therefore the ability to find dense cross-modal image correspondences between two hyperspectral images taken under these drastically different lighting conditions. We address this challenge with the introduction of X-RAFT, a Recurrent All-Pairs Field Transforms (RAFT) optical flow model modified for cross-modal inputs. We propose using distinct image encoders for each modality pair, and fine-tune these in a self-supervised manner using flow-cycle-consistency on our neurosurgical hyperspectral data. We show an error reduction of 36.6% across our evaluation metrics when comparing to a naive baseline and 27.83% reduction compared to an existing cross-modal optical flow method (CrossRAFT). Our code and models will be made publicly available after the review process.