IVSep 17, 2019
A Guaranteed Convergence Analysis for the Projected Fast Iterative Soft-Thresholding Algorithm in Parallel MRIXinlin Zhang, Hengfa Lu, Di Guo et al.
The boom of non-uniform sampling and compressed sensing techniques dramatically alleviates the lengthy data acquisition problem of magnetic resonance imaging. Sparse reconstruction, thanks to its fast computation and promising performance, has attracted researchers to put numerous efforts on it and has been adopted in commercial scanners. To perform sparse reconstruction, choosing a proper algorithm is essential in providing satisfying results and saving time in tuning parameters. The pFISTA, a simple and efficient algorithm for sparse reconstruction, has been successfully extended to parallel imaging. However, its convergence criterion is still an open question. And the existing convergence criterion of single-coil pFISTA cannot be applied to the parallel imaging pFISTA, which, therefore, imposes confusions and difficulties on users about determining the only parameter - step size. In this work, we provide the guaranteed convergence analysis of the parallel imaging version pFISTA to solve the two well-known parallel imaging reconstruction models, SENSE and SPIRiT. Along with the convergence analysis, we provide recommended step size values for SENSE and SPIRiT reconstructions to obtain fast and promising reconstructions. Experiments on in vivo brain images demonstrate the validity of the convergence criterion. Besides, experimental results show that compared to using backtracking and power iteration to determine the step size, our recommended step size achieves more than five times acceleration in reconstruction time in most tested cases.
MED-PHApr 9, 2019
Accelerated Nuclear Magnetic Resonance Spectroscopy with Deep LearningXiaobo Qu, Yihui Huang, Hengfa Lu et al.
Nuclear magnetic resonance (NMR) spectroscopy serves as an indispensable tool in chemistry and biology but often suffers from long experimental time. We present a proof-of-concept of application of deep learning and neural network for high-quality, reliable, and very fast NMR spectra reconstruction from limited experimental data. We show that the neural network training can be achieved using solely synthetic NMR signal, which lifts the prohibiting demand for a large volume of realistic training data usually required in the deep learning approach.
MLApr 6, 2016
Hankel Matrix Nuclear Norm Regularized Tensor Completion for $N$-dimensional Exponential SignalsJiaxi Ying, Hengfa Lu, Qingtao Wei et al.
Signals are generally modeled as a superposition of exponential functions in spectroscopy of chemistry, biology and medical imaging. For fast data acquisition or other inevitable reasons, however, only a small amount of samples may be acquired and thus how to recover the full signal becomes an active research topic. But existing approaches can not efficiently recover $N$-dimensional exponential signals with $N\geq 3$. In this paper, we study the problem of recovering N-dimensional (particularly $N\geq 3$) exponential signals from partial observations, and formulate this problem as a low-rank tensor completion problem with exponential factor vectors. The full signal is reconstructed by simultaneously exploiting the CANDECOMP/PARAFAC structure and the exponential structure of the associated factor vectors. The latter is promoted by minimizing an objective function involving the nuclear norm of Hankel matrices. Experimental results on simulated and real magnetic resonance spectroscopy data show that the proposed approach can successfully recover full signals from very limited samples and is robust to the estimated tensor rank.