MEJul 31, 2020
Variational approximations of empirical Bayes posteriors in high-dimensional linear modelsYue Yang, Ryan Martin
In high-dimensions, the prior tails can have a significant effect on both posterior computation and asymptotic concentration rates. To achieve optimal rates while keeping the posterior computations relatively simple, an empirical Bayes approach has recently been proposed, featuring thin-tailed conjugate priors with data-driven centers. While conjugate priors ease some of the computational burden, Markov chain Monte Carlo methods are still needed, which can be expensive when dimension is high. In this paper, we develop a variational approximation to the empirical Bayes posterior that is fast to compute and retains the optimal concentration rate properties of the original. In simulations, our method is shown to have superior performance compared to existing variational approximations in the literature across a wide range of high-dimensional settings.
STJan 24, 2020
Validity, consonant plausibility measures, and conformal predictionLeonardo Cella, Ryan Martin
Prediction of future observations is an important and challenging problem. The two mainstream approaches for quantifying prediction uncertainty use prediction regions and predictive distributions, respectively, with the latter believed to be more informative because it can perform other prediction-related tasks. The standard notion of validity, what we refer to here as Type-1 validity, focuses on coverage probability of prediction regions, while a notion of validity relevant to the other prediction-related tasks performed by predictive distributions is lacking. Here we present a new notion, called Type-2 validity, relevant to these other prediction tasks. We establish connections between Type-2 validity and coherence properties, and show that imprecise probability considerations are required in order to achieve it. We go on to show that both types of prediction validity can be achieved by interpreting the conformal prediction output as the contour function of a consonant plausibility measure. We also offer an alternative characterization of conformal prediction, based on a new nonparametric inferential model construction, wherein the appearance of consonance is natural, and prove its validity.
MLMay 13, 2019
Variational approximations using Fisher divergenceYue Yang, Ryan Martin, Howard Bondell
Modern applications of Bayesian inference involve models that are sufficiently complex that the corresponding posterior distributions are intractable and must be approximated. The most common approximation is based on Markov chain Monte Carlo, but these can be expensive when the data set is large and/or the model is complex, so more efficient variational approximations have recently received considerable attention. The traditional variational methods, that seek to minimize the Kullback--Leibler divergence between the posterior and a relatively simple parametric family, provide accurate and efficient estimation of the posterior mean, but often does not capture other moments, and have limitations in terms of the models to which they can be applied. Here we propose the construction of variational approximations based on minimizing the Fisher divergence, and develop an efficient computational algorithm that can be applied to a wide range of models without conjugacy or potentially unrealistic mean-field assumptions. We demonstrate the superior performance of the proposed method for the benchmark case of logistic regression.