David Mestel

David Mestel, Steven Chaplick, Steven Kelk et al.

Phylogenetic trees are leaf-labelled trees used to model the evolution of species. In practice it is not uncommon to obtain two topologically distinct trees for the same set of species, and this motivates the use of distance measures to quantify dissimilarity. A well-known measure is the maximum agreement forest (MAF): a minimum-size partition of the leaf labels which splits both trees into the same set of disjoint, leaf-labelled subtrees (up to isomorphism after suppressing degree-2 vertices). Computing such a MAF is NP-hard and so considerable effort has been invested in finding FPT algorithms, parameterised by $k$, the number of components of a MAF. The state of the art has been unchanged since 2015, with running times of $O^*(3^k)$ for unrooted trees and $O^*(2.3431^k)$ for rooted trees. In this work we present improved algorithms for both the unrooted and rooted cases, with runtimes $O^*(2.846^k)$ and $O^*(2.3391^k)$ respectively. The key to our improvement is a novel branching strategy in which we show that any overlapping components obtained on the way to a MAF can be `split' by a branching rule with favourable branching factor, and then the problem can be decomposed into disjoint subproblems to be solved separately. We expect that this technique may be more widely applicable to other problems in algorithmic phylogenetics.

David Mestel

Can quantum entanglement increase the capacity of (classical) covert channels? To one familiar with Holevo's Theorem it is tempting to think that the answer is obviously no. However, in this work we show: quantum entanglement can in fact increase the capacity of a classical covert channel, in the presence of an active adversary; on the other hand, a zero-capacity channel is not improved by entanglement, so entanglement cannot create `purely quantum' covert channels; the problem of determining the capacity of a given channel in the presence of entanglement is undecidable; but there is an algorithm to bound the entangled capacity of a channel from above, adapted from the semi-definite hierarchy from the theory of non-local games, whose close connection to channel capacity is at the core of all of our results.

David Mestel

A known drawback of `decentralised' contact tracing architectures is that users who have been in contact with an infected person are able to precisely identify the relevant contact, and thereby perhaps identify the infected person. In their proposal, the PACT team discuss a simple DH-based protocol to mitigate this problem, but dismiss it because it is vulnerable to a malicious user who may deviate from the specified behaviour. This note presents a modified protocol which achieves robustness against a fully malicious user, and establishes some simple security properties.

David Mestel

We consider the problem of quantifying information flow in interactive systems, modelled as finite-state transducers in the style of Goguen and Meseguer. Our main result is that if the system is deterministic then the information flow is either logarithmic or linear, and there is a polynomial-time algorithm to distinguish the two cases and compute the rate of logarithmic flow. To achieve this we first extend the theory of information leakage through channels to the case of interactive systems, and establish a number of results which greatly simplify computation. We then show that for deterministic systems the information flow corresponds to the growth rate of antichains inside a certain regular language, a property called the width of the language. In a companion work we have shown that there is a dichotomy between polynomial and exponential antichain growth, and a polynomial time algorithm to distinguish the two cases and to compute the order of polynomial growth. We observe that these two cases correspond to logarithmic and linear information flow respectively. Finally, we formulate several attractive open problems, covering the cases of probabilistic systems, systems with more than two users and nondeterministic systems where the nondeterminism is assumed to be innocent rather than demonic.