Amyra Meidiana

DS
3papers
19citations
Novelty45%
AI Score38

3 Papers

5.8DSApr 28
Fast and Faithful Edge Bundling using Spectral Sparsification

Xingjue Jiang, Seok-Hee Hong, Amyra Meidiana et al.

Edge bundling reduces the visual complexity of drawings of large and complex graphs by clustering "compatible" edges. However, it often introduces distortion by bundling "unrelated" edges, resulting in misleading, ambiguous drawings. Moreover, existing edge bundling methods often have high computational complexity. We present new edge bundling methods and faithfulness metrics for edge bundling using spectral sparsification, which sparsifies a graph G into a subgraph G' with O(n log n) edges, based on the effective resistance values of edges, preserving the spectrum of G, closely related to important structural properties of G, such as connectivity, clustering, and the commute distance. We first present a new edge bundling method SEB (Spectral Edge Bundling), introducing effective resistance-based compatibility for spectral-faithful bundling, improving distortion and ambiguity. Then, we present a general framework FEB (Fast Edge Bundling) utilizing spectral sparsification to improve the efficiency of existing bundling methods while maintaining a similar quality. We also present FBQ (Fast Bundling Quality) framework for proxy bundle faithfulness metrics, for measuring how FEB faithfully preserves the ground truth structure in the original edge bundling, with two variants, FBQ_JS (utilizing Jaccard Similarity) and FBQ_SQ (utilizing sampling quality metrics). Extensive experiments using various real-world and synthetic graphs demonstrate the effectiveness of SEB for edge bundling, outperforming state-of-art bundling methods on quality metrics, with 46% and 17% average improvement in distortion and ambiguity respectively for SEB2. Furthermore, experiments successfully demonstrate the efficiency of the FEB framework, with 61% runtime improvement over the original edge bundling methods without sparsification, while maintaining a similar quality, with 74% similarity based on FBQ_SQ.

DSAug 18, 2020
New Quality Metrics for Dynamic Graph Drawing

Amyra Meidiana, Seok-Hee Hong, Peter Eades

In this paper, we present new quality metrics for dynamic graph drawings. Namely, we present a new framework for change faithfulness metrics for dynamic graph drawings, which compare the ground truth change in dynamic graphs and the geometric change in drawings. More specifically, we present two specific instances, cluster change faithfulness metrics and distance change faithfulness metrics. We first validate the effectiveness of our new metrics using deformation experiments. Then we compare various graph drawing algorithms using our metrics. Our experiments confirm that the best cluster (resp. distance) faithful graph drawing algorithms are also cluster (resp. distance) change faithful.

DSAug 21, 2019
A Quality Metric for Visualization of Clusters in Graphs

Amyra Meidiana, Seok-Hee Hong, Peter Eades et al.

Traditionally, graph quality metrics focus on readability, but recent studies show the need for metrics which are more specific to the discovery of patterns in graphs. Cluster analysis is a popular task within graph analysis, yet there is no metric yet explicitly quantifying how well a drawing of a graph represents its cluster structure. We define a clustering quality metric measuring how well a node-link drawing of a graph represents the clusters contained in the graph. Experiments with deforming graph drawings verify that our metric effectively captures variations in the visual cluster quality of graph drawings. We then use our metric to examine how well different graph drawing algorithms visualize cluster structures in various graphs; the results con-firm that some algorithms which have been specifically designed to show cluster structures perform better than other algorithms.