Benjamin Killeen

Xingtong Liu, Yiping Zheng, Benjamin Killeen et al.

High-quality 3D reconstructions from endoscopy video play an important role in many clinical applications, including surgical navigation where they enable direct video-CT registration. While many methods exist for general multi-view 3D reconstruction, these methods often fail to deliver satisfactory performance on endoscopic video. Part of the reason is that local descriptors that establish pair-wise point correspondences, and thus drive reconstruction, struggle when confronted with the texture-scarce surface of anatomy. Learning-based dense descriptors usually have larger receptive fields enabling the encoding of global information, which can be used to disambiguate matches. In this work, we present an effective self-supervised training scheme and novel loss design for dense descriptor learning. In direct comparison to recent local and dense descriptors on an in-house sinus endoscopy dataset, we demonstrate that our proposed dense descriptor can generalize to unseen patients and scopes, thereby largely improving the performance of Structure from Motion (SfM) in terms of model density and completeness. We also evaluate our method on a public dense optical flow dataset and a small-scale SfM public dataset to further demonstrate the effectiveness and generality of our method. The source code is available at https://github.com/lppllppl920/DenseDescriptorLearning-Pytorch.

Andrew Hundt, Benjamin Killeen, Nicholas Greene et al.

Current Reinforcement Learning (RL) algorithms struggle with long-horizon tasks where time can be wasted exploring dead ends and task progress may be easily reversed. We develop the SPOT framework, which explores within action safety zones, learns about unsafe regions without exploring them, and prioritizes experiences that reverse earlier progress to learn with remarkable efficiency. The SPOT framework successfully completes simulated trials of a variety of tasks, improving a baseline trial success rate from 13% to 100% when stacking 4 cubes, from 13% to 99% when creating rows of 4 cubes, and from 84% to 95% when clearing toys arranged in adversarial patterns. Efficiency with respect to actions per trial typically improves by 30% or more, while training takes just 1-20k actions, depending on the task. Furthermore, we demonstrate direct sim to real transfer. We are able to create real stacks in 100% of trials with 61% efficiency and real rows in 100% of trials with 59% efficiency by directly loading the simulation-trained model on the real robot with no additional real-world fine-tuning. To our knowledge, this is the first instance of reinforcement learning with successful sim to real transfer applied to long term multi-step tasks such as block-stacking and row-making with consideration of progress reversal. Code is available at https://github.com/jhu-lcsr/good_robot .

Cong Gao, Xingtong Liu, Wenhao Gu et al.

Differentiable rendering is a technique to connect 3D scenes with corresponding 2D images. Since it is differentiable, processes during image formation can be learned. Previous approaches to differentiable rendering focus on mesh-based representations of 3D scenes, which is inappropriate for medical applications where volumetric, voxelized models are used to represent anatomy. We propose a novel Projective Spatial Transformer module that generalizes spatial transformers to projective geometry, thus enabling differentiable volume rendering. We demonstrate the usefulness of this architecture on the example of 2D/3D registration between radiographs and CT scans. Specifically, we show that our transformer enables end-to-end learning of an image processing and projection model that approximates an image similarity function that is convex with respect to the pose parameters, and can thus be optimized effectively using conventional gradient descent. To the best of our knowledge, this is the first time that spatial transformers have been described for projective geometry. The source code will be made public upon publication of this manuscript and we hope that our developments will benefit related 3D research applications.