4.9MLJun 4, 2020
Handling missing data in model-based clusteringAlessio Serafini, Thomas Brendan Murphy, Luca Scrucca
Gaussian Mixture models (GMMs) are a powerful tool for clustering, classification and density estimation when clustering structures are embedded in the data. The presence of missing values can largely impact the GMMs estimation process, thus handling missing data turns out to be a crucial point in clustering, classification and density estimation. Several techniques have been developed to impute the missing values before model estimation. Among these, multiple imputation is a simple and useful general approach to handle missing data. In this paper we propose two different methods to fit Gaussian mixtures in the presence of missing data. Both methods use a variant of the Monte Carlo Expectation-Maximisation (MCEM) algorithm for data augmentation. Thus, multiple imputations are performed during the E-step, followed by the standard M-step for a given eigen-decomposed component-covariance matrix. We show that the proposed methods outperform the multiple imputation approach, both in terms of clusters identification and density estimation.
2.3MEFeb 10, 2020
A fast and efficient Modal EM algorithm for Gaussian mixturesLuca Scrucca
In the modal approach to clustering, clusters are defined as the local maxima of the underlying probability density function, where the latter can be estimated either non-parametrically or using finite mixture models. Thus, clusters are closely related to certain regions around the density modes, and every cluster corresponds to a bump of the density. The Modal EM algorithm is an iterative procedure that can identify the local maxima of any density function. In this contribution, we propose a fast and efficient Modal EM algorithm to be used when the density function is estimated through a finite mixture of Gaussian distributions with parsimonious component-covariance structures. After describing the procedure, we apply the proposed Modal EM algorithm on both simulated and real data examples, showing its high flexibility in several contexts.
2.3MEAug 10, 2015
Model-based SIR for dimension reductionLuca Scrucca
A new dimension reduction method based on Gaussian finite mixtures is proposed as an extension to sliced inverse regression (SIR). The model-based SIR (MSIR) approach allows the main limitation of SIR to be overcome, i.e., failure in the presence of regression symmetric relationships, without the need to impose further assumptions. Extensive numerical studies are presented to compare the new method with some of most popular dimension reduction methods, such as SIR, sliced average variance estimation, principal Hessian direction, and directional regression. MSIR appears sufficiently flexible to accommodate various regression functions, and its performance is comparable with or better, particularly as sample size grows, than other available methods. Lastly, MSIR is illustrated with two real data examples about ozone concentration regression, and hand-written digit classification.