Tülay Adalı

Marie Roald, Carla Schenker, Vince D. Calhoun et al.

Analyzing multi-way measurements with variations across one mode of the dataset is a challenge in various fields including data mining, neuroscience and chemometrics. For example, measurements may evolve over time or have unaligned time profiles. The PARAFAC2 model has been successfully used to analyze such data by allowing the underlying factor matrices in one mode (i.e., the evolving mode) to change across slices. The traditional approach to fit a PARAFAC2 model is to use an alternating least squares-based algorithm, which handles the constant cross-product constraint of the PARAFAC2 model by implicitly estimating the evolving factor matrices. This approach makes imposing regularization on these factor matrices challenging. There is currently no algorithm to flexibly impose such regularization with general penalty functions and hard constraints. In order to address this challenge and to avoid the implicit estimation, in this paper, we propose an algorithm for fitting PARAFAC2 based on alternating optimization with the alternating direction method of multipliers (AO-ADMM). With numerical experiments on simulated data, we show that the proposed PARAFAC2 AO-ADMM approach allows for flexible constraints, recovers the underlying patterns accurately, and is computationally efficient compared to the state-of-the-art. We also apply our model to two real-world datasets from neuroscience and chemometrics, and show that constraining the evolving mode improves the interpretability of the extracted patterns.

Zois Boukouvalas, Christine Mallinson, Evan Crothers et al.

Social media has become an important communication channel during high impact events, such as the COVID-19 pandemic. As misinformation in social media can rapidly spread, creating social unrest, curtailing the spread of misinformation during such events is a significant data challenge. While recent solutions that are based on machine learning have shown promise for the detection of misinformation, most widely used methods include approaches that rely on either handcrafted features that cannot be optimal for all scenarios, or those that are based on deep learning where the interpretation of the prediction results is not directly accessible. In this work, we propose a data-driven solution that is based on the ICA model, such that knowledge discovery and detection of misinformation are achieved jointly. To demonstrate the effectiveness of our method and compare its performance with deep learning methods, we developed a labeled COVID-19 Twitter dataset based on socio-linguistic criteria.

Marie Roald, Suchita Bhinge, Chunying Jia et al.

Characterizing time-evolving networks is a challenging task, but it is crucial for understanding the dynamic behavior of complex systems such as the brain. For instance, how spatial networks of functional connectivity in the brain evolve during a task is not well-understood. A traditional approach in neuroimaging data analysis is to make simplifications through the assumption of static spatial networks. In this paper, without assuming static networks in time and/or space, we arrange the temporal data as a higher-order tensor and use a tensor factorization model called PARAFAC2 to capture underlying patterns (spatial networks) in time-evolving data and their evolution. Numerical experiments on simulated data demonstrate that PARAFAC2 can successfully reveal the underlying networks and their dynamics. We also show the promising performance of the model in terms of tracing the evolution of task-related functional connectivity in the brain through the analysis of functional magnetic resonance imaging data.

Evrim Acar, Yuri Levin-Schwartz, Vince D. Calhoun et al.

Neuroimaging modalities such as functional magnetic resonance imaging (fMRI) and electroencephalography (EEG) provide information about neurological functions in complementary spatiotemporal resolutions; therefore, fusion of these modalities is expected to provide better understanding of brain activity. In this paper, we jointly analyze fMRI and multi-channel EEG signals collected during an auditory oddball task with the goal of capturing brain activity patterns that differ between patients with schizophrenia and healthy controls. Rather than selecting a single electrode or matricizing the third-order tensor that can be naturally used to represent multi-channel EEG signals, we preserve the multi-way structure of EEG data and use a coupled matrix and tensor factorization (CMTF) model to jointly analyze fMRI and EEG signals. Our analysis reveals that (i) joint analysis of EEG and fMRI using a CMTF model can capture meaningful temporal and spatial signatures of patterns that behave differently in patients and controls, and (ii) these differences and the interpretability of the associated components increase by including multiple electrodes from frontal, motor and parietal areas, but not necessarily by including all electrodes in the analysis.

Guoxu Zhou, Qibin Zhao, Yu Zhang et al.

With the increasing availability of various sensor technologies, we now have access to large amounts of multi-block (also called multi-set, multi-relational, or multi-view) data that need to be jointly analyzed to explore their latent connections. Various component analysis methods have played an increasingly important role for the analysis of such coupled data. In this paper, we first provide a brief review of existing matrix-based (two-way) component analysis methods for the joint analysis of such data with a focus on biomedical applications. Then, we discuss their important extensions and generalization to multi-block multiway (tensor) data. We show how constrained multi-block tensor decomposition methods are able to extract similar or statistically dependent common features that are shared by all blocks, by incorporating the multiway nature of data. Special emphasis is given to the flexible common and individual feature analysis of multi-block data with the aim to simultaneously extract common and individual latent components with desired properties and types of diversity. Illustrative examples are given to demonstrate their effectiveness for biomedical data analysis.

Matthew Anderson, Geng-Shen Fu, Ronald Phlypo et al.

Recently, an extension of independent component analysis (ICA) from one to multiple datasets, termed independent vector analysis (IVA), has been the subject of significant research interest. IVA has also been shown to be a generalization of Hotelling's canonical correlation analysis. In this paper, we provide the identification conditions for a general IVA formulation, which accounts for linear, nonlinear, and sample-to-sample dependencies. The identification conditions are a generalization of previous results for ICA and for IVA when samples are independently and identically distributed. Furthermore, a principal aim of IVA is the identification of dependent sources between datasets. Thus, we provide the additional conditions for when the arbitrary ordering of the sources within each dataset is common. Performance bounds in terms of the Cramer-Rao lower bound are also provided for the demixing matrices and interference to source ratio. The performance of two IVA algorithms are compared to the theoretical bounds.