Feng Xie

Feng Xie, Biwei Huang, Zhengming Chen et al.

We investigate the task of learning causal structure in the presence of latent variables, including locating latent variables and determining their quantity, and identifying causal relationships among both latent and observed variables. To this end, we propose a Generalized Independent Noise (GIN) condition for linear non-Gaussian acyclic causal models that incorporate latent variables, which establishes the independence between a linear combination of certain measured variables and some other measured variables. Specifically, for two observed random vectors $\bf{Y}$ and $\bf{Z}$, GIN holds if and only if $ω^{\intercal}\mathbf{Y}$ and $\mathbf{Z}$ are independent, where $ω$ is a non-zero parameter vector determined by the cross-covariance between $\mathbf{Y}$ and $\mathbf{Z}$. We then give necessary and sufficient graphical criteria of the GIN condition in linear non-Gaussian acyclic models. Roughly speaking, GIN implies the existence of a set $\mathcal{S}$ such that $\mathcal{S}$ is causally earlier (w.r.t. the causal ordering) than $\mathbf{Y}$, and that every active (collider-free) path between $\mathbf{Y}$ and $\mathbf{Z}$ must contain a node from $\mathcal{S}$. Interestingly, we find that the independent noise condition (i.e., if there is no confounder, causes are independent of the residual derived from regressing the effect on the causes) can be seen as a special case of GIN. With such a connection between GIN and latent causal structures, we further leverage the proposed GIN condition, together with a well-designed search procedure, to efficiently estimate Linear, Non-Gaussian Latent Hierarchical Models (LiNGLaHs), where latent confounders may also be causally related and may even follow a hierarchical structure. We show that the causal structure of a LiNGLaH is identifiable in light of GIN conditions. Experimental results show the effectiveness of the proposed method.

Zheng Li, Xichen Guo, Feng Xie et al.

Estimating causal effects from nonexperimental data is a fundamental problem in many fields of science. A key component of this task is selecting an appropriate set of covariates for confounding adjustment to avoid bias. Most existing methods for covariate selection often assume the absence of latent variables and rely on learning the global network structure among variables. However, identifying the global structure can be unnecessary and inefficient, especially when our primary interest lies in estimating the effect of a treatment variable on an outcome variable. To address this limitation, we propose a novel local learning approach for covariate selection in nonparametric causal effect estimation, which accounts for the presence of latent variables. Our approach leverages testable independence and dependence relationships among observed variables to identify a valid adjustment set for a target causal relationship, ensuring both soundness and completeness under standard assumptions. We validate the effectiveness of our algorithm through extensive experiments on both synthetic and real-world data.

Zhengming Chen, Ruichu Cai, Feng Xie et al.

Unobserved discrete data are ubiquitous in many scientific disciplines, and how to learn the causal structure of these latent variables is crucial for uncovering data patterns. Most studies focus on the linear latent variable model or impose strict constraints on latent structures, which fail to address cases in discrete data involving non-linear relationships or complex latent structures. To achieve this, we explore a tensor rank condition on contingency tables for an observed variable set $\mathbf{X}_p$, showing that the rank is determined by the minimum support of a specific conditional set (not necessary in $\mathbf{X}_p$) that d-separates all variables in $\mathbf{X}_p$. By this, one can locate the latent variable through probing the rank on different observed variables set, and further identify the latent causal structure under some structure assumptions. We present the corresponding identification algorithm and conduct simulated experiments to verify the effectiveness of our method. In general, our results elegantly extend the identification boundary for causal discovery with discrete latent variables and expand the application scope of causal discovery with latent variables.

Feng Xie, Ruichu Cai, Biwei Huang et al.

Causal discovery aims to recover causal structures or models underlying the observed data. Despite its success in certain domains, most existing methods focus on causal relations between observed variables, while in many scenarios the observed ones may not be the underlying causal variables (e.g., image pixels), but are generated by latent causal variables or confounders that are causally related. To this end, in this paper, we consider Linear, Non-Gaussian Latent variable Models (LiNGLaMs), in which latent confounders are also causally related, and propose a Generalized Independent Noise (GIN) condition to estimate such latent variable graphs. Specifically, for two observed random vectors $\mathbf{Y}$ and $\mathbf{Z}$, GIN holds if and only if $ω^{\intercal}\mathbf{Y}$ and $\mathbf{Z}$ are statistically independent, where $ω$ is a parameter vector characterized from the cross-covariance between $\mathbf{Y}$ and $\mathbf{Z}$. From the graphical view, roughly speaking, GIN implies that causally earlier latent common causes of variables in $\mathbf{Y}$ d-separate $\mathbf{Y}$ from $\mathbf{Z}$. Interestingly, we find that the independent noise condition, i.e., if there is no confounder, causes are independent from the error of regressing the effect on the causes, can be seen as a special case of GIN. Moreover, we show that GIN helps locate latent variables and identify their causal structure, including causal directions. We further develop a recursive learning algorithm to achieve these goals. Experimental results on synthetic and real-world data demonstrate the effectiveness of our method.

Yan Zeng, Shohei Shimizu, Ruichu Cai et al.

Discovering causal structures among latent factors from observed data is a particularly challenging problem. Despite some efforts for this problem, existing methods focus on the single-domain data only. In this paper, we propose Multi-Domain Linear Non-Gaussian Acyclic Models for Latent Factors (MD-LiNA), where the causal structure among latent factors of interest is shared for all domains, and we provide its identification results. The model enriches the causal representation for multi-domain data. We propose an integrated two-phase algorithm to estimate the model. In particular, we first locate the latent factors and estimate the factor loading matrix. Then to uncover the causal structure among shared latent factors of interest, we derive a score function based on the characterization of independence relations between external influences and the dependence relations between multi-domain latent factors and latent factors of interest. We show that the proposed method provides locally consistent estimators. Experimental results on both synthetic and real-world data demonstrate the efficacy and robustness of our approach.