Zhengqing Yuan

Rong Zhou, Zhengqing Yuan, Zhiling Yan et al.

Biomedical image segmentation is crucial for accurately diagnosing and analyzing various diseases. However, Convolutional Neural Networks (CNNs) and Transformers, the most commonly used architectures for this task, struggle to effectively capture long-range dependencies due to the inherent locality of CNNs and the computational complexity of Transformers. To address this limitation, we introduce TTT-Unet, a novel framework that integrates Test-Time Training (TTT) layers into the traditional U-Net architecture for biomedical image segmentation. TTT-Unet dynamically adjusts model parameters during the testing time, enhancing the model's ability to capture both local and long-range features. We evaluate TTT-Unet on multiple medical imaging datasets, including 3D abdominal organ segmentation in CT and MR images, instrument segmentation in endoscopy images, and cell segmentation in microscopy images. The results demonstrate that TTT-Unet consistently outperforms state-of-the-art CNN-based and Transformer-based segmentation models across all tasks. The code is available at https://github.com/rongzhou7/TTT-Unet.

Zhengqing Yuan, Huiwen Xue, Chao Zhang et al.

Large deep learning models have shown great potential for delivering exceptional results in various applications. However, the training process can be incredibly challenging due to the models' vast parameter sizes, often consisting of hundreds of billions of parameters. Common distributed training methods, such as data parallelism, tensor parallelism, and pipeline parallelism, demand significant data communication throughout the process, leading to prolonged wait times for some machines in physically distant distributed systems. To address this issue, we propose a novel solution called Hulk, which utilizes a modified graph neural network to optimize distributed computing systems. Hulk not only optimizes data communication efficiency between different countries or even different regions within the same city, but also provides optimal distributed deployment of models in parallel. For example, it can place certain layers on a machine in a specific region or pass specific parameters of a model to a machine in a particular location. By using Hulk in experiments, we were able to improve the time efficiency of training large deep learning models on distributed systems by more than 20\%. Our open source collection of unlabeled data:https://github.com/DLYuanGod/Hulk.

Zhiling Yan, Weixiang Sun, Rong Zhou et al.

Medical image segmentation and video object segmentation are essential for diagnosing and analyzing diseases by identifying and measuring biological structures. Recent advances in natural domain have been driven by foundation models like the Segment Anything Model 2 (SAM-2). To explore the performance of SAM-2 in biomedical applications, we designed three evaluation pipelines for single-frame 2D image segmentation, multi-frame 3D image segmentation and multi-frame video segmentation with varied prompt designs, revealing SAM-2's limitations in medical contexts. Consequently, we developed BioSAM-2, an enhanced foundation model optimized for biomedical data based on SAM-2. Our experiments show that BioSAM-2 not only surpasses the performance of existing state-of-the-art foundation models but also matches or even exceeds specialist models, demonstrating its efficacy and potential in the medical domain.

Weixiang Sun, Xiaocao You, Ruizhe Zheng et al.

Generative models hold promise for revolutionizing medical education, robot-assisted surgery, and data augmentation for medical AI development. Diffusion models can now generate realistic images from text prompts, while recent advancements have demonstrated their ability to create diverse, high-quality videos. However, these models often struggle with generating accurate representations of medical procedures and detailed anatomical structures. This paper introduces Bora, the first spatio-temporal diffusion probabilistic model designed for text-guided biomedical video generation. Bora leverages Transformer architecture and is pre-trained on general-purpose video generation tasks. It is fine-tuned through model alignment and instruction tuning using a newly established medical video corpus, which includes paired text-video data from various biomedical fields. To the best of our knowledge, this is the first attempt to establish such a comprehensive annotated biomedical video dataset. Bora is capable of generating high-quality video data across four distinct biomedical domains, adhering to medical expert standards and demonstrating consistency and diversity. This generalist video generative model holds significant potential for enhancing medical consultation and decision-making, particularly in resource-limited settings. Additionally, Bora could pave the way for immersive medical training and procedure planning. Extensive experiments on distinct medical modalities such as endoscopy, ultrasound, MRI, and cell tracking validate the effectiveness of our model in understanding biomedical instructions and its superior performance across subjects compared to state-of-the-art generation models.

Zhengqing Yuan, Huiwen Xue, Chao Zhang et al.

In recent years, pretrained models have been widely used in various fields, including natural language understanding, computer vision, and natural language generation. However, the performance of these language generation models is highly dependent on the model size and the dataset size. While larger models excel in some aspects, they cannot learn up-to-date knowledge and are relatively difficult to relearn. In this paper, we introduce EvoText, a novel training method that enhances the performance of any natural language generation model without requiring additional datasets during the entire training process (although a prior dataset is necessary for pretraining). EvoText employs two models: $G$, a text generation model, and $D$, a model that can determine whether the data generated by $G$ is legitimate. Initially, the fine-tuned $D$ model serves as the knowledge base. The text generated by $G$ is then input to $D$ to determine whether it is legitimate. Finally, $G$ is fine-tuned based on $D$'s output. EvoText enables the model to learn up-to-date knowledge through a self-escalation process that builds on a priori knowledge. When EvoText needs to learn something new, it simply fine-tunes the $D$ model. Our approach applies to autoregressive language modeling for all Transformer classes. With EvoText, eight models achieved stable improvements in seven natural language processing tasks without any changes to the model structure.

Zhengqing Yuan, Zhaoxu Li, Weiran Huang et al.

In recent years, multimodal large language models (MLLMs) such as GPT-4V have demonstrated remarkable advancements, excelling in a variety of vision-language tasks. Despite their prowess, the closed-source nature and computational demands of such models limit their accessibility and applicability. This study introduces TinyGPT-V, a novel open-source MLLM, designed for efficient training and inference across various vision-language tasks, including image captioning (IC) and visual question answering (VQA). Leveraging a compact yet powerful architecture, TinyGPT-V integrates the Phi-2 language model with pre-trained vision encoders, utilizing a unique mapping module for visual and linguistic information fusion. With a training regimen optimized for small backbones and employing a diverse dataset amalgam, TinyGPT-V requires significantly lower computational resources 24GB for training and as little as 8GB for inference without compromising on performance. Our experiments demonstrate that TinyGPT-V, with its language model 2.8 billion parameters, achieves comparable results in VQA and image inference tasks to its larger counterparts while being uniquely suited for deployment on resource-constrained devices through innovative quantization techniques. This work not only paves the way for more accessible and efficient MLLMs but also underscores the potential of smaller, optimized models in bridging the gap between high performance and computational efficiency in real-world applications. Additionally, this paper introduces a new approach to multimodal large language models using smaller backbones. Our code and training weights are available in the supplementary material.

Zhengqing Yuan, Yixin Liu, Yihan Cao et al.

Text-to-video generation has made significant strides, but replicating the capabilities of advanced systems like OpenAI Sora remains challenging due to their closed-source nature. Existing open-source methods struggle to achieve comparable performance, often hindered by ineffective agent collaboration and inadequate training data quality. In this paper, we introduce Mora, a novel multi-agent framework that leverages existing open-source modules to replicate Sora functionalities. We address these fundamental limitations by proposing three key techniques: (1) multi-agent fine-tuning with a self-modulation factor to enhance inter-agent coordination, (2) a data-free training strategy that uses large models to synthesize training data, and (3) a human-in-the-loop mechanism combined with multimodal large language models for data filtering to ensure high-quality training datasets. Our comprehensive experiments on six video generation tasks demonstrate that Mora achieves performance comparable to Sora on VBench, outperforming existing open-source methods across various tasks. Specifically, in the text-to-video generation task, Mora achieved a Video Quality score of 0.800, surpassing Sora 0.797 and outperforming all other baseline models across six key metrics. Additionally, in the image-to-video generation task, Mora achieved a perfect Dynamic Degree score of 1.00, demonstrating exceptional capability in enhancing motion realism and achieving higher Imaging Quality than Sora. These results highlight the potential of collaborative multi-agent systems and human-in-the-loop mechanisms in advancing text-to-video generation. Our code is available at \url{https://github.com/lichao-sun/Mora}.

Zhengqing Yuan, Xiaolong Zhang, Yue Wang et al.

Data augmentation is a widely used technique in machine learning to improve model performance. However, existing data augmentation techniques in natural language understanding (NLU) may not fully capture the complexity of natural language variations, and they can be challenging to apply to large datasets. This paper proposes the Random Position Noise (RPN) algorithm, a novel data augmentation technique that operates at the word vector level. RPN modifies the word embeddings of the original text by introducing noise based on the existing values of selected word vectors, allowing for more fine-grained modifications and better capturing natural language variations. Unlike traditional data augmentation methods, RPN does not require gradients in the computational graph during virtual sample updates, making it simpler to apply to large datasets. Experimental results demonstrate that RPN consistently outperforms existing data augmentation techniques across various NLU tasks, including sentiment analysis, natural language inference, and paraphrase detection. Moreover, RPN performs well in low-resource settings and is applicable to any model featuring a word embeddings layer. The proposed RPN algorithm is a promising approach for enhancing NLU performance and addressing the challenges associated with traditional data augmentation techniques in large-scale NLU tasks. Our experimental results demonstrated that the RPN algorithm achieved state-of-the-art performance in all seven NLU tasks, thereby highlighting its effectiveness and potential for real-world NLU applications.

Yixin Liu, Kai Zhang, Yuan Li et al.

Sora is a text-to-video generative AI model, released by OpenAI in February 2024. The model is trained to generate videos of realistic or imaginative scenes from text instructions and show potential in simulating the physical world. Based on public technical reports and reverse engineering, this paper presents a comprehensive review of the model's background, related technologies, applications, remaining challenges, and future directions of text-to-video AI models. We first trace Sora's development and investigate the underlying technologies used to build this "world simulator". Then, we describe in detail the applications and potential impact of Sora in multiple industries ranging from film-making and education to marketing. We discuss the main challenges and limitations that need to be addressed to widely deploy Sora, such as ensuring safe and unbiased video generation. Lastly, we discuss the future development of Sora and video generation models in general, and how advancements in the field could enable new ways of human-AI interaction, boosting productivity and creativity of video generation.

Yue Huang, Zhengqing Yuan, Yujun Zhou et al.

Large Language Models (LLMs) are increasingly employed for simulations, enabling applications in role-playing agents and Computational Social Science (CSS). However, the reliability of these simulations is under-explored, which raises concerns about the trustworthiness of LLMs in these applications. In this paper, we aim to answer ``How reliable is LLM-based simulation?'' To address this, we introduce TrustSim, an evaluation dataset covering 10 CSS-related topics, to systematically investigate the reliability of the LLM simulation. We conducted experiments on 14 LLMs and found that inconsistencies persist in the LLM-based simulated roles. In addition, the consistency level of LLMs does not strongly correlate with their general performance. To enhance the reliability of LLMs in simulation, we proposed Adaptive Learning Rate Based ORPO (AdaORPO), a reinforcement learning-based algorithm to improve the reliability in simulation across 7 LLMs. Our research provides a foundation for future studies to explore more robust and trustworthy LLM-based simulations.

Yunhong He, Jianling Qiu, Wei Zhang et al.

Recent advancements in large language models (LLMs) have significantly enhanced capabilities in natural language processing and artificial intelligence. These models, including GPT-3.5 and LLaMA-2, have revolutionized text generation, translation, and question-answering tasks due to the transformative Transformer model. Despite their widespread use, LLMs present challenges such as ethical dilemmas when models are compelled to respond inappropriately, susceptibility to phishing attacks, and privacy violations. This paper addresses these challenges by introducing a multi-pronged approach that includes: 1) filtering sensitive vocabulary from user input to prevent unethical responses; 2) detecting role-playing to halt interactions that could lead to 'prison break' scenarios; 3) implementing custom rule engines to restrict the generation of prohibited content; and 4) extending these methodologies to various LLM derivatives like Multi-Model Large Language Models (MLLMs). Our approach not only fortifies models against unethical manipulations and privacy breaches but also maintains their high performance across tasks. We demonstrate state-of-the-art performance under various attack prompts, without compromising the model's core functionalities. Furthermore, the introduction of differentiated security levels empowers users to control their personal data disclosure. Our methods contribute to reducing social risks and conflicts arising from technological abuse, enhance data protection, and promote social equity. Collectively, this research provides a framework for balancing the efficiency of question-answering systems with user privacy and ethical standards, ensuring a safer user experience and fostering trust in AI technology.

Yiyang Li, Zehong Wang, Zhengqing Yuan et al.

Illicit drug use among teenagers and young adults (TYAs) remains a pressing public health concern, with rising prevalence and long-term impacts on health and well-being. To detect illicit drug use among TYAs, researchers analyze large-scale surveys such as the Youth Risk Behavior Survey (YRBS) and the National Survey on Drug Use and Health (NSDUH), which preserve rich demographic, psychological, and environmental factors related to substance use. However, existing modeling methods treat survey variables independently, overlooking latent and interconnected structures among them. To address this limitation, we propose LAMI (LAtent relation Mining with bi-modal Interpretability), a novel joint graph-language modeling framework for detecting illicit drug use and interpreting behavioral risk factors among TYAs. LAMI represents individual responses as relational graphs, learns latent connections through a specialized graph structure learning layer, and integrates a large language model to generate natural language explanations grounded in both graph structures and survey semantics. Experiments on the YRBS and NSDUH datasets show that LAMI outperforms competitive baselines in predictive accuracy. Interpretability analyses further demonstrate that LAMI reveals meaningful behavioral substructures and psychosocial pathways, such as family dynamics, peer influence, and school-related distress, that align with established risk factors for substance use.

Yue Huang, Zhengzhe Jiang, Xiaonan Luo et al.

Empowering large language models (LLMs) with chemical intelligence remains a challenge due to the scarcity of high-quality, domain-specific instruction-response datasets and the misalignment of existing synthetic data generation pipelines with the inherently hierarchical and rule-governed structure of chemical information. To address this, we propose ChemOrch, a framework that synthesizes chemically grounded instruction-response pairs through a two-stage process: task-controlled instruction generation and tool-aware response construction. ChemOrch enables controllable diversity and levels of difficulty for the generated tasks, and ensures response precision through tool planning and distillation, and tool-based self-repair mechanisms. The effectiveness of ChemOrch is evaluated based on: 1) the high quality of generated instruction data, demonstrating superior diversity and strong alignment with chemical constraints; 2) the reliable generation of evaluation tasks that more effectively reveal LLM weaknesses in chemistry; and 3) the significant improvement of LLM chemistry capabilities when the generated instruction data are used for fine-tuning. Our work thus represents a critical step toward scalable and verifiable chemical intelligence in LLMs.