Lyudmila S. Mihaylova

Tianhao Zhang, Heather J. McCourty, Berardo M. Sanchez-Tafolla et al.

Deep learning has revolutionized medical and biological imaging, particularly in segmentation tasks. However, segmenting biological cells remains challenging due to the high variability and complexity of cell shapes. Addressing this challenge requires high-quality datasets that accurately represent the diverse morphologies found in biological cells. Existing cell segmentation datasets are often limited by their focus on regular and uniform shapes. In this paper, we introduce a novel benchmark dataset of Ntera-2 (NT2) cells, a pluripotent carcinoma cell line, exhibiting diverse morphologies across multiple stages of differentiation, capturing the intricate and heterogeneous cellular structures that complicate segmentation tasks. To address these challenges, we propose an uncertainty-aware deep learning framework for complex cellular morphology segmentation (MorphoSeg) by incorporating sampling of virtual outliers from low-likelihood regions during training. Our comprehensive experimental evaluations against state-of-the-art baselines demonstrate that MorphoSeg significantly enhances segmentation accuracy, achieving up to a 7.74% increase in the Dice Similarity Coefficient (DSC) and a 28.36% reduction in the Hausdorff Distance. These findings highlight the effectiveness of our dataset and methodology in advancing cell segmentation capabilities, especially for complex and variable cell morphologies. The dataset and source code is publicly available at https://github.com/RanchoGoose/MorphoSeg.

Tianhao Zhang, Zhixiang Chen, Lyudmila S. Mihaylova

Vision Transformers (ViTs) have achieved remarkable success over various vision tasks, yet their robustness against data distribution shifts and inherent inductive biases remain underexplored. To enhance the robustness of ViT models for image Out-of-Distribution (OOD) detection, we introduce a novel and generic framework named Prior-augmented Vision Transformer (PViT). Taking as input the prior class logits from a pretrained model, we train PViT to predict the class logits. During inference, PViT identifies OOD samples by quantifying the divergence between the predicted class logits and the prior logits obtained from pre-trained models. Unlike existing state-of-the-art(SOTA) OOD detection methods, PViT shapes the decision boundary between ID and OOD by utilizing the proposed prior guided confidence, without requiring additional data modeling, generation methods, or structural modifications. Extensive experiments on the large-scale ImageNet benchmark, evaluated against over seven OOD datasets, demonstrate that PViT significantly outperforms existing SOTA OOD detection methods in terms of FPR95 and AUROC. The codebase is publicly available at https://github.com/RanchoGoose/PViT.

Amornyos Horprasert, Esa Apriaskar, Xingyu Liu et al.

One of the key challenges that Reinforcement Learning (RL) faces is its limited capability to adapt to a change of data distribution caused by uncertainties. This challenge arises especially in RL systems using deep neural networks as decision makers or policies, which are prone to overfitting after prolonged training on fixed environments. To address this challenge, this paper proposes Gaussian Process Diffusion Policy (GPDP), a new algorithm that integrates diffusion models and Gaussian Process Regression (GPR) to represent the policy. GPR guides diffusion models to generate actions that maximize learned Q-function, resembling the policy improvement in RL. Furthermore, the kernel-based nature of GPR enhances the policy's exploration efficiency under distribution shifts at test time, increasing the chance of discovering new behaviors and mitigating overfitting. Simulation results on the Walker2d benchmark show that our approach outperforms state-of-the-art algorithms under distribution shift condition by achieving around 67.74% to 123.18% improvement in the RL's objective function while maintaining comparable performance under normal conditions.