Marc Harper

2papers

2 Papers

LGJul 5, 2020
Momentum Accelerates Evolutionary Dynamics

Marc Harper, Joshua Safyan

We combine momentum from machine learning with evolutionary dynamics, where momentum can be viewed as a simple mechanism of intergenerational memory. Using information divergences as Lyapunov functions, we show that momentum accelerates the convergence of evolutionary dynamics including the replicator equation and Euclidean gradient descent on populations. When evolutionarily stable states are present, these methods prove convergence for small learning rates or small momentum, and yield an analytic determination of the relative decrease in time to converge that agrees well with computations. The main results apply even when the evolutionary dynamic is not a gradient flow. We also show that momentum can alter the convergence properties of these dynamics, for example by breaking the cycling associated to the rock-paper-scissors landscape, leading to either convergence to the ordinarily non-absorbing equilibrium, or divergence, depending on the value and mechanism of momentum.

DSMar 19, 2013
Inferring Fitness in Finite Populations with Moran-like dynamics

Marc Harper

Biological fitness is not an observable quantity and must be inferred from population dynamics. Bayesian inference applied to the Moran process and variants yields a robust inference method that can infer fitness in populations evolving via a Moran dynamic and generalizations. Information about fitness is derived solely from birth-events in birth-death and death-birth processes in which selection acts proportionally to fitness, which allows the method to be applied to populations on a network where the network itself may be changing in time. Populations may also be allowed to change size while still allowing estimates for fitness to be inferred.