Mohammed Khalilia

Mustafa Jarrar, Sanad Malaysha, Tymaa Hammouda et al.

SALMA, the first Arabic sense-annotated corpus, consists of ~34K tokens, which are all sense-annotated. The corpus is annotated using two different sense inventories simultaneously (Modern and Ghani). SALMA novelty lies in how tokens and senses are associated. Instead of linking a token to only one intended sense, SALMA links a token to multiple senses and provides a score to each sense. A smart web-based annotation tool was developed to support scoring multiple senses against a given word. In addition to sense annotations, we also annotated the corpus using six types of named entities. The quality of our annotations was assessed using various metrics (Kappa, Linear Weighted Kappa, Quadratic Weighted Kappa, Mean Average Error, and Root Mean Square Error), which show very high inter-annotator agreement. To establish a Word Sense Disambiguation baseline using our SALMA corpus, we developed an end-to-end Word Sense Disambiguation system using Target Sense Verification. We used this system to evaluate three Target Sense Verification models available in the literature. Our best model achieved an accuracy with 84.2% using Modern and 78.7% using Ghani. The full corpus and the annotation tool are open-source and publicly available at https://sina.birzeit.edu/salma/.

Haneen Liqreina, Mustafa Jarrar, Mohammed Khalilia et al.

Traditional NER systems are typically trained to recognize coarse-grained entities, and less attention is given to classifying entities into a hierarchy of fine-grained lower-level subtypes. This article aims to advance Arabic NER with fine-grained entities. We chose to extend Wojood (an open-source Nested Arabic Named Entity Corpus) with subtypes. In particular, four main entity types in Wojood, geopolitical entity (GPE), location (LOC), organization (ORG), and facility (FAC), are extended with 31 subtypes. To do this, we first revised Wojood's annotations of GPE, LOC, ORG, and FAC to be compatible with the LDC's ACE guidelines, which yielded 5, 614 changes. Second, all mentions of GPE, LOC, ORG, and FAC (~44K) in Wojood are manually annotated with the LDC's ACE sub-types. We refer to this extended version of Wojood as WojoodF ine. To evaluate our annotations, we measured the inter-annotator agreement (IAA) using both Cohen's Kappa and F1 score, resulting in 0.9861 and 0.9889, respectively. To compute the baselines of WojoodF ine, we fine-tune three pre-trained Arabic BERT encoders in three settings: flat NER, nested NER and nested NER with subtypes and achieved F1 score of 0.920, 0.866, and 0.885, respectively. Our corpus and models are open-source and available at https://sina.birzeit.edu/wojood/.

Mustafa Jarrar, Mohammed Khalilia, Sana Ghanem

This paper presents Wojood, a corpus for Arabic nested Named Entity Recognition (NER). Nested entities occur when one entity mention is embedded inside another entity mention. Wojood consists of about 550K Modern Standard Arabic (MSA) and dialect tokens that are manually annotated with 21 entity types including person, organization, location, event and date. More importantly, the corpus is annotated with nested entities instead of the more common flat annotations. The data contains about 75K entities and 22.5% of which are nested. The inter-annotator evaluation of the corpus demonstrated a strong agreement with Cohen's Kappa of 0.979 and an F1-score of 0.976. To validate our data, we used the corpus to train a nested NER model based on multi-task learning and AraBERT (Arabic BERT). The model achieved an overall micro F1-score of 0.884. Our corpus, the annotation guidelines, the source code and the pre-trained model are publicly available.

Sanad Malaysha, Mo El-Haj, Saad Ezzini et al.

The expanding financial markets of the Arab world require sophisticated Arabic NLP tools. To address this need within the banking domain, the Arabic Financial NLP (AraFinNLP) shared task proposes two subtasks: (i) Multi-dialect Intent Detection and (ii) Cross-dialect Translation and Intent Preservation. This shared task uses the updated ArBanking77 dataset, which includes about 39k parallel queries in MSA and four dialects. Each query is labeled with one or more of a common 77 intents in the banking domain. These resources aim to foster the development of robust financial Arabic NLP, particularly in the areas of machine translation and banking chat-bots. A total of 45 unique teams registered for this shared task, with 11 of them actively participated in the test phase. Specifically, 11 teams participated in Subtask 1, while only 1 team participated in Subtask 2. The winning team of Subtask 1 achieved F1 score of 0.8773, and the only team submitted in Subtask 2 achieved a 1.667 BLEU score.

Mohammed Khalilia, Sanad Malaysha, Reem Suwaileh et al.

This paper presents an overview of the Arabic Natural Language Understanding (ArabicNLU 2024) shared task, focusing on two subtasks: Word Sense Disambiguation (WSD) and Location Mention Disambiguation (LMD). The task aimed to evaluate the ability of automated systems to resolve word ambiguity and identify locations mentioned in Arabic text. We provided participants with novel datasets, including a sense-annotated corpus for WSD, called SALMA with approximately 34k annotated tokens, and the IDRISI-DA dataset with 3,893 annotations and 763 unique location mentions. These are challenging tasks. Out of the 38 registered teams, only three teams participated in the final evaluation phase, with the highest accuracy being 77.8% for WSD and the highest MRR@1 being 95.0% for LMD. The shared task not only facilitated the evaluation and comparison of different techniques, but also provided valuable insights and resources for the continued advancement of Arabic NLU technologies.

Sanad Malaysha, Mustafa Jarrar, Mohammed Khalilia

Arabic language lacks semantic datasets and sense inventories. The most common semantically-labeled dataset for Arabic is the ArabGlossBERT, a relatively small dataset that consists of 167K context-gloss pairs (about 60K positive and 107K negative pairs), collected from Arabic dictionaries. This paper presents an enrichment to the ArabGlossBERT dataset, by augmenting it using (Arabic-English-Arabic) machine back-translation. Augmentation increased the dataset size to 352K pairs (149K positive and 203K negative pairs). We measure the impact of augmentation using different data configurations to fine-tune BERT on target sense verification (TSV) task. Overall, the accuracy ranges between 78% to 84% for different data configurations. Although our approach performed at par with the baseline, we did observe some improvements for some POS tags in some experiments. Furthermore, our fine-tuned models are trained on a larger dataset covering larger vocabulary and contexts. We provide an in-depth analysis of the accuracy for each part-of-speech (POS).

Mustafa Jarrar, Muhammad Abdul-Mageed, Mohammed Khalilia et al.

We present WojoodNER-2023, the first Arabic Named Entity Recognition (NER) Shared Task. The primary focus of WojoodNER-2023 is on Arabic NER, offering novel NER datasets (i.e., Wojood) and the definition of subtasks designed to facilitate meaningful comparisons between different NER approaches. WojoodNER-2023 encompassed two Subtasks: FlatNER and NestedNER. A total of 45 unique teams registered for this shared task, with 11 of them actively participating in the test phase. Specifically, 11 teams participated in FlatNER, while $8$ teams tackled NestedNER. The winning teams achieved F1 scores of 91.96 and 93.73 in FlatNER and NestedNER, respectively.

Mustafa Jarrar, Nagham Hamad, Mohammed Khalilia et al.

We present WojoodNER-2024, the second Arabic Named Entity Recognition (NER) Shared Task. In WojoodNER-2024, we focus on fine-grained Arabic NER. We provided participants with a new Arabic fine-grained NER dataset called wojoodfine, annotated with subtypes of entities. WojoodNER-2024 encompassed three subtasks: (i) Closed-Track Flat Fine-Grained NER, (ii) Closed-Track Nested Fine-Grained NER, and (iii) an Open-Track NER for the Israeli War on Gaza. A total of 43 unique teams registered for this shared task. Five teams participated in the Flat Fine-Grained Subtask, among which two teams tackled the Nested Fine-Grained Subtask and one team participated in the Open-Track NER Subtask. The winning teams achieved F-1 scores of 91% and 92% in the Flat Fine-Grained and Nested Fine-Grained Subtasks, respectively. The sole team in the Open-Track Subtask achieved an F-1 score of 73.7%.

Mustafa Jarrar, Ahmet Birim, Mohammed Khalilia et al.

This paper presents the ArBanking77, a large Arabic dataset for intent detection in the banking domain. Our dataset was arabized and localized from the original English Banking77 dataset, which consists of 13,083 queries to ArBanking77 dataset with 31,404 queries in both Modern Standard Arabic (MSA) and Palestinian dialect, with each query classified into one of the 77 classes (intents). Furthermore, we present a neural model, based on AraBERT, fine-tuned on ArBanking77, which achieved an F1-score of 0.9209 and 0.8995 on MSA and Palestinian dialect, respectively. We performed extensive experimentation in which we simulated low-resource settings, where the model is trained on a subset of the data and augmented with noisy queries to simulate colloquial terms, mistakes and misspellings found in real NLP systems, especially live chat queries. The data and the models are publicly available at https://sina.birzeit.edu/arbanking77.

Alaa Aljabari, Lina Duaibes, Mustafa Jarrar et al.

Event-argument extraction is a challenging task, particularly in Arabic due to sparse linguistic resources. To fill this gap, we introduce the \hadath corpus ($550$k tokens) as an extension of Wojood, enriched with event-argument annotations. We used three types of event arguments: $agent$, $location$, and $date$, which we annotated as relation types. Our inter-annotator agreement evaluation resulted in $82.23\%$ $Kappa$ score and $87.2\%$ $F_1$-score. Additionally, we propose a novel method for event relation extraction using BERT, in which we treat the task as text entailment. This method achieves an $F_1$-score of $94.01\%$. To further evaluate the generalization of our proposed method, we collected and annotated another out-of-domain corpus (about $80$k tokens) called \testNLI and used it as a second test set, on which our approach achieved promising results ($83.59\%$ $F_1$-score). Last but not least, we propose an end-to-end system for event-arguments extraction. This system is implemented as part of SinaTools, and both corpora are publicly available at {\small \url{https://sina.birzeit.edu/wojood}}

Nagham Hamad, Mohammed Khalilia, Mustafa Jarrar

We introduce Konooz, a novel multi-dimensional corpus covering 16 Arabic dialects across 10 domains, resulting in 160 distinct corpora. The corpus comprises about 777k tokens, carefully collected and manually annotated with 21 entity types using both nested and flat annotation schemes - using the Wojood guidelines. While Konooz is useful for various NLP tasks like domain adaptation and transfer learning, this paper primarily focuses on benchmarking existing Arabic Named Entity Recognition (NER) models, especially cross-domain and cross-dialect model performance. Our benchmarking of four Arabic NER models using Konooz reveals a significant drop in performance of up to 38% when compared to the in-distribution data. Furthermore, we present an in-depth analysis of domain and dialect divergence and the impact of resource scarcity. We also measured the overlap between domains and dialects using the Maximum Mean Discrepancy (MMD) metric, and illustrated why certain NER models perform better on specific dialects and domains. Konooz is open-source and publicly available at https://sina.birzeit.edu/wojood/#download

Tymaa Hammouda, Mustafa Jarrar, Mohammed Khalilia

We introduce SinaTools, an open-source Python package for Arabic natural language processing and understanding. SinaTools is a unified package allowing people to integrate it into their system workflow, offering solutions for various tasks such as flat and nested Named Entity Recognition (NER), fully-flagged Word Sense Disambiguation (WSD), Semantic Relatedness, Synonymy Extractions and Evaluation, Lemmatization, Part-of-speech Tagging, Root Tagging, and additional helper utilities such as corpus processing, text stripping methods, and diacritic-aware word matching. This paper presents SinaTools and its benchmarking results, demonstrating that SinaTools outperforms all similar tools on the aforementioned tasks, such as Flat NER (87.33%), Nested NER (89.42%), WSD (82.63%), Semantic Relatedness (0.49 Spearman rank), Lemmatization (90.5%), POS tagging (97.5%), among others. SinaTools can be downloaded from (https://sina.birzeit.edu/sinatools).

Parminder Bhatia, Busra Celikkaya, Mohammed Khalilia et al.

Comprehend Medical is a stateless and Health Insurance Portability and Accountability Act (HIPAA) eligible Named Entity Recognition (NER) and Relationship Extraction (RE) service launched under Amazon Web Services (AWS) trained using state-of-the-art deep learning models. Contrary to many existing open source tools, Comprehend Medical is scalable and does not require steep learning curve, dependencies, pipeline configurations, or installations. Currently, Comprehend Medical performs NER in five medical categories: Anatomy, Medical Condition, Medications, Protected Health Information (PHI) and Treatment, Test and Procedure (TTP). Additionally, the service provides relationship extraction for the detected entities as well as contextual information such as negation and temporality in the form of traits. Comprehend Medical provides two Application Programming Interfaces (API): 1) the NERe API which returns all the extracted named entities, their traits and the relationships between them and 2) the PHId API which returns just the protected health information contained in the text. Furthermore, Comprehend Medical is accessible through AWS Console, Java and Python Software Development Kit (SDK), making it easier for non-developers and developers to use.

Sanad Malaysha, Mustafa Jarrar, Mohammed Khalilia

Semantic textual relatedness is a broader concept of semantic similarity. It measures the extent to which two chunks of text convey similar meaning or topics, or share related concepts or contexts. This notion of relatedness can be applied in various applications, such as document clustering and summarizing. SemRel-2024, a shared task in SemEval-2024, aims at reducing the gap in the semantic relatedness task by providing datasets for fourteen languages and dialects including Arabic. This paper reports on our participation in Track A (Algerian and Moroccan dialects) and Track B (Modern Standard Arabic). A BERT-based model is augmented and fine-tuned for regression scoring in supervised track (A), while BERT-based cosine similarity is employed for unsupervised track (B). Our system ranked 1st in SemRel-2024 for MSA with a Spearman correlation score of 0.49. We ranked 5th for Moroccan and 12th for Algerian with scores of 0.83 and 0.53, respectively.

Annamalai Senthilnathan, Kristjan Arumae, Mohammed Khalilia et al.

Analyzing long text data such as customer call transcripts is a cost-intensive and tedious task. Machine learning methods, namely Transformers, are leveraged to model agent-customer interactions. Unfortunately, Transformers adhere to fixed-length architectures and their self-attention mechanism scales quadratically with input length. Such limitations make it challenging to leverage traditional Transformers for long sequence tasks, such as conversational understanding, especially in real-time use cases. In this paper we explore and evaluate recently proposed efficient Transformer variants (e.g. Performer, Reformer) and a CNN-based architecture for real-time and near real-time long conversational understanding tasks. We show that CNN-based models are dynamic, ~2.6x faster to train, ~80% faster inference and ~72% more memory efficient compared to Transformers on average. Additionally, we evaluate the CNN model using the Long Range Arena benchmark to demonstrate competitiveness in general long document analysis.

Parminder Bhatia, Busra Celikkaya, Mohammed Khalilia

Negative medical findings are prevalent in clinical reports, yet discriminating them from positive findings remains a challenging task for information extraction. Most of the existing systems treat this task as a pipeline of two separate tasks, i.e., named entity recognition (NER) and rule-based negation detection. We consider this as a multi-task problem and present a novel end-to-end neural model to jointly extract entities and negations. We extend a standard hierarchical encoder-decoder NER model and first adopt a shared encoder followed by separate decoders for the two tasks. This architecture performs considerably better than the previous rule-based and machine learning-based systems. To overcome the problem of increased parameter size especially for low-resource settings, we propose the Conditional Softmax Shared Decoder architecture which achieves state-of-art results for NER and negation detection on the 2010 i2b2/VA challenge dataset and a proprietary de-identified clinical dataset.

Mengqi Jin, Mohammad Taha Bahadori, Aaron Colak et al.

Clinical text provides essential information to estimate the acuity of a patient during hospital stays in addition to structured clinical data. In this study, we explore how clinical text can complement a clinical predictive learning task. We leverage an internal medical natural language processing service to perform named entity extraction and negation detection on clinical notes and compose selected entities into a new text corpus to train document representations. We then propose a multimodal neural network to jointly train time series signals and unstructured clinical text representations to predict the in-hospital mortality risk for ICU patients. Our model outperforms the benchmark by 2% AUC.