Terumasa Tokunaga

Ryoya Katafuchi, Terumasa Tokunaga

The utilization of prior knowledge about anomalies is an essential issue for anomaly detections. Recently, the visual attention mechanism has become a promising way to improve the performance of CNNs for some computer vision tasks. In this paper, we propose a novel model called Layer-wise External Attention Network (LEA-Net) for efficient image anomaly detection. The core idea relies on the integration of unsupervised and supervised anomaly detectors via the visual attention mechanism. Our strategy is as follows: (i) Prior knowledge about anomalies is represented as the anomaly map generated by unsupervised learning of normal instances, (ii) The anomaly map is translated to an attention map by the external network, (iii) The attention map is then incorporated into intermediate layers of the anomaly detection network. Notably, this layer-wise external attention can be applied to any CNN model in an end-to-end training manner. For a pilot study, we validate LEA-Net on color anomaly detection tasks. Through extensive experiments on PlantVillage, MVTec AD, and Cloud datasets, we demonstrate that the proposed layer-wise visual attention mechanism consistently boosts anomaly detection performances of an existing CNN model, even on imbalanced datasets. Moreover, we show that our attention mechanism successfully boosts the performance of several CNN models.

Ryoya Katafuchi, Terumasa Tokunaga

This paper proposes an unsupervised anomaly detection technique for image-based plant disease diagnosis. The construction of large and publicly available datasets containing labeled images of healthy and diseased crop plants led to growing interest in computer vision techniques for automatic plant disease diagnosis. Although supervised image classifiers based on deep learning can be a powerful tool for plant disease diagnosis, they require a huge amount of labeled data. The data mining technique of anomaly detection includes unsupervised approaches that do not require rare samples for training classifiers. We propose an unsupervised anomaly detection technique for image-based plant disease diagnosis that is based on the reconstructability of colors; a deep encoder-decoder network trained to reconstruct the colors of \textit{healthy} plant images should fail to reconstruct colors of symptomatic regions. Our proposed method includes a new image-based framework for plant disease detection that utilizes a conditional adversarial network called pix2pix and a new anomaly score based on CIEDE2000 color difference. Experiments with PlantVillage dataset demonstrated the superiority of our proposed method compared to an existing anomaly detector at identifying diseased crop images in terms of accuracy, interpretability and computational efficiency.

Osamu Hirose, Shotaro Kawaguchi, Terumasa Tokunaga et al.

Tracking many cells in time-lapse 3D image sequences is an important challenging task of bioimage informatics. Motivated by a study of brain-wide 4D imaging of neural activity in C. elegans, we present a new method of multi-cell tracking. Data types to which the method is applicable are characterized as follows: (i) cells are imaged as globular-like objects, (ii) it is difficult to distinguish cells based only on shape and size, (iii) the number of imaged cells ranges in several hundreds, (iv) moves of nearly-located cells are strongly correlated and (v) cells do not divide. We developed a tracking software suite which we call SPF-CellTracker. Incorporating dependency on cells' moves into prediction model is the key to reduce the tracking errors: cell-switching and coalescence of tracked positions. We model target cells' correlated moves as a Markov random field and we also derive a fast computation algorithm, which we call spatial particle filter. With the live-imaging data of nuclei of C. elegans neurons in which approximately 120 nuclei of neurons are imaged, we demonstrate an advantage of the proposed method over the standard particle filter and a method developed by Tokunaga et al. (2014).