Marcel Reinders

Pedro Mateus, Swier Garst, Jing Yu et al.

Biological age scores are an emerging tool to characterize aging by estimating chronological age based on physiological biomarkers. Various scores have shown associations with aging-related outcomes. This study assessed the relation between an age score based on brain MRI images (BrainAge) and an age score based on metabolomic biomarkers (MetaboAge). We trained a federated deep learning model to estimate BrainAge in three cohorts. The federated BrainAge model yielded significantly lower error for age prediction across the cohorts than locally trained models. Harmonizing the age interval between cohorts further improved BrainAge accuracy. Subsequently, we compared BrainAge with MetaboAge using federated association and survival analyses. The results showed a small association between BrainAge and MetaboAge as well as a higher predictive value for the time to mortality of both scores combined than for the individual scores. Hence, our study suggests that both aging scores capture different aspects of the aging process.

Swier Garst, Marcel Reinders

Federated learning is a technique that enables the use of distributed datasets for machine learning purposes without requiring data to be pooled, thereby better preserving privacy and ownership of the data. While supervised FL research has grown substantially over the last years, unsupervised FL methods remain scarce. This work introduces an algorithm which implements K-means clustering in a federated manner, addressing the challenges of varying number of clusters between centers, as well as convergence on less separable datasets.

Michael Beekhuizen, Arman Naseri, David Tax et al.

Unlike the more commonly analyzed ECG or PPG data for activity classification, heart rate time series data is less detailed, often noisier and can contain missing data points. Using the BigIdeasLab_STEP dataset, which includes heart rate time series annotated with specific tasks performed by individuals, we sought to determine if general classification was achievable. Our analyses showed that the accuracy is sensitive to the choice of window/stride size. Moreover, we found variable classification performances between subjects due to differences in the physical structure of their hearts. Various techniques were used to minimize this variability. First of all, normalization proved to be a crucial step and significantly improved the performance. Secondly, grouping subjects and performing classification inside a group helped to improve performance and decrease inter-subject variability. Finally, we show that including handcrafted features as input to a deep learning (DL) network improves the classification performance further. Together, these findings indicate that heart rate time series can be utilized for classification tasks like predicting activity. However, normalization or grouping techniques need to be chosen carefully to minimize the issue of subject variability.

M. Naderibeni, M. J. T. Reinders, L. Wu et al.

We leverage Physics-Informed Neural Networks (PINNs) to learn solution functions of parametric Navier-Stokes Equations (NSE). Our proposed approach results in a feasible optimization problem setup that bypasses PINNs' limitations in converging to solutions of highly nonlinear parametric-PDEs like NSE. We consider the parameter(s) of interest as inputs of PINNs along with spatio-temporal coordinates, and train PINNs on generated numerical solutions of parametric-PDES for instances of the parameters. We perform experiments on the classical 2D flow past cylinder problem aiming to learn velocities and pressure functions over a range of Reynolds numbers as parameter of interest. Provision of training data from generated numerical simulations allows for interpolation of the solution functions for a range of parameters. Therefore, we compare PINNs with unconstrained conventional Neural Networks (NN) on this problem setup to investigate the effectiveness of considering the PDEs regularization in the loss function. We show that our proposed approach results in optimizing PINN models that learn the solution functions while making sure that flow predictions are in line with conservational laws of mass and momentum. Our results show that PINN results in accurate prediction of gradients compared to NN model, this is clearly visible in predicted vorticity fields given that none of these models were trained on vorticity labels.