Seung Yeon Shin

Seung Yeon Shin, Soochahn Lee, Kyoung Jin Noh et al.

We present a method to extract coronary vessels from fluoroscopic x-ray sequences. Given the vessel structure for the source frame, vessel correspondence candidates in the subsequent frame are generated by a novel hierarchical search scheme to overcome the aperture problem. Optimal correspondences are determined within a Markov random field optimization framework. Post-processing is performed to extract vessel branches newly visible due to the inflow of contrast agent. Quantitative and qualitative evaluation conducted on a dataset of 18 sequences demonstrates the effectiveness of the proposed method.

Seung Yeon Shin, Thomas C. Shen, Stephen A. Wank et al.

Finding small lesions is very challenging due to lack of noticeable features, severe class imbalance, as well as the size itself. One approach to improve small lesion segmentation is to reduce the region of interest and inspect it at a higher sensitivity rather than performing it for the entire region. It is usually implemented as sequential or joint segmentation of organ and lesion, which requires additional supervision on organ segmentation. Instead, we propose to utilize an intensity distribution of a target lesion at no additional labeling cost to effectively separate regions where the lesions are possibly located from the background. It is incorporated into network training as an auxiliary task. We applied the proposed method to segmentation of small bowel carcinoid tumors in CT scans. We observed improvements for all metrics (33.5% $\rightarrow$ 38.2%, 41.3% $\rightarrow$ 47.8%, 30.0% $\rightarrow$ 35.9% for the global, per case, and per tumor Dice scores, respectively.) compared to the baseline method, which proves the validity of our idea. Our method can be one option for explicitly incorporating intensity distribution information of a target in network training.

Seung Yeon Shin, Thomas C. Shen, Ronald M. Summers

We propose a method to incorporate the intensity information of a target lesion on CT scans in training segmentation and detection networks. We first build an intensity-based lesion probability (ILP) function from an intensity histogram of the target lesion. It is used to compute the probability of being the lesion for each voxel based on its intensity. Finally, the computed ILP map of each input CT scan is provided as additional supervision for network training, which aims to inform the network about possible lesion locations in terms of intensity values at no additional labeling cost. The method was applied to improve the segmentation of three different lesion types, namely, small bowel carcinoid tumor, kidney tumor, and lung nodule. The effectiveness of the proposed method on a detection task was also investigated. We observed improvements of 41.3% -> 47.8%, 74.2% -> 76.0%, and 26.4% -> 32.7% in segmenting small bowel carcinoid tumor, kidney tumor, and lung nodule, respectively, in terms of per case Dice scores. An improvement of 64.6% -> 75.5% was achieved in detecting kidney tumors in terms of average precision. The results of different usages of the ILP map and the effect of varied amount of training data are also presented.

Seung Yeon Shin, Sungwon Lee, Ronald M. Summers

We present a new graph-based method for small bowel path tracking based on cylindrical constraints. A distinctive characteristic of the small bowel compared to other organs is the contact between parts of itself along its course, which makes the path tracking difficult together with the indistinct appearance of the wall. It causes the tracked path to easily cross over the walls when relying on low-level features like the wall detection. To circumvent this, a series of cylinders that are fitted along the course of the small bowel are used to guide the tracking to more reliable directions. It is implemented as soft constraints using a new cost function. The proposed method is evaluated against ground-truth paths that are all connected from start to end of the small bowel for 10 abdominal CT scans. The proposed method showed clear improvements compared to the baseline method in tracking the path without making an error. Improvements of 6.6% and 17.0%, in terms of the tracked length, were observed for two different settings related to the small bowel segmentation.

Youngmin Baek, Daehyun Nam, Sungrae Park et al.

Despite the recent success of text detection and recognition methods, existing evaluation metrics fail to provide a fair and reliable comparison among those methods. In addition, there exists no end-to-end evaluation metric that takes characteristics of OCR tasks into account. Previous end-to-end metric contains cascaded errors from the binary scoring process applied in both detection and recognition tasks. Ignoring partially correct results raises a gap between quantitative and qualitative analysis, and prevents fine-grained assessment. Based on the fact that character is a key element of text, we hereby propose a Character-Level Evaluation metric (CLEval). In CLEval, the \textit{instance matching} process handles split and merge detection cases, and the \textit{scoring process} conducts character-level evaluation. By aggregating character-level scores, the CLEval metric provides a fine-grained evaluation of end-to-end results composed of the detection and recognition as well as individual evaluations for each module from the end-performance perspective. We believe that our metrics can play a key role in developing and analyzing state-of-the-art text detection and recognition methods. The evaluation code is publicly available at https://github.com/clovaai/CLEval.

Youngmin Baek, Seung Shin, Jeonghun Baek et al.

A scene text spotter is composed of text detection and recognition modules. Many studies have been conducted to unify these modules into an end-to-end trainable model to achieve better performance. A typical architecture places detection and recognition modules into separate branches, and a RoI pooling is commonly used to let the branches share a visual feature. However, there still exists a chance of establishing a more complimentary connection between the modules when adopting recognizer that uses attention-based decoder and detector that represents spatial information of the character regions. This is possible since the two modules share a common sub-task which is to find the location of the character regions. Based on the insight, we construct a tightly coupled single pipeline model. This architecture is formed by utilizing detection outputs in the recognizer and propagating the recognition loss through the detection stage. The use of character score map helps the recognizer attend better to the character center points, and the recognition loss propagation to the detector module enhances the localization of the character regions. Also, a strengthened sharing stage allows feature rectification and boundary localization of arbitrary-shaped text regions. Extensive experiments demonstrate state-of-the-art performance in publicly available straight and curved benchmark dataset.

Seung Yeon Shin, Soochahn Lee, Il Dong Yun et al.

We propose a novel deep-learning-based system for vessel segmentation. Existing methods using CNNs have mostly relied on local appearances learned on the regular image grid, without considering the graphical structure of vessel shape. To address this, we incorporate a graph convolutional network into a unified CNN architecture, where the final segmentation is inferred by combining the different types of features. The proposed method can be applied to expand any type of CNN-based vessel segmentation method to enhance the performance. Experiments show that the proposed method outperforms the current state-of-the-art methods on two retinal image datasets as well as a coronary artery X-ray angiography dataset.