5.3IVJun 8, 2023
Connectional-Style-Guided Contextual Representation Learning for Brain Disease DiagnosisGongshu Wang, Ning Jiang, Yunxiao Ma et al.
Structural magnetic resonance imaging (sMRI) has shown great clinical value and has been widely used in deep learning (DL) based computer-aided brain disease diagnosis. Previous approaches focused on local shapes and textures in sMRI that may be significant only within a particular domain. The learned representations are likely to contain spurious information and have a poor generalization ability in other diseases and datasets. To facilitate capturing meaningful and robust features, it is necessary to first comprehensively understand the intrinsic pattern of the brain that is not restricted within a single data/task domain. Considering that the brain is a complex connectome of interlinked neurons, the connectional properties in the brain have strong biological significance, which is shared across multiple domains and covers most pathological information. In this work, we propose a connectional style contextual representation learning model (CS-CRL) to capture the intrinsic pattern of the brain, used for multiple brain disease diagnosis. Specifically, it has a vision transformer (ViT) encoder and leverages mask reconstruction as the proxy task and Gram matrices to guide the representation of connectional information. It facilitates the capture of global context and the aggregation of features with biological plausibility. The results indicate that CS-CRL achieves superior accuracy in multiple brain disease diagnosis tasks across six datasets and three diseases and outperforms state-of-the-art models. Furthermore, we demonstrate that CS-CRL captures more brain-network-like properties, better aggregates features, is easier to optimize and is more robust to noise, which explains its superiority in theory. Our source code will be released soon.
1.5CVJun 20, 2023
Multi-task Collaborative Pre-training and Individual-adaptive-tokens Fine-tuning: A Unified Framework for Brain Representation LearningNing Jiang, Gongshu Wang, Tianyi Yan
Structural magnetic resonance imaging (sMRI) provides accurate estimates of the brain's structural organization and learning invariant brain representations from sMRI is an enduring issue in neuroscience. Previous deep representation learning models ignore the fact that the brain, as the core of human cognitive activity, is distinct from other organs whose primary attribute is anatomy. Therefore, capturing the semantic structure that dominates interindividual cognitive variability is key to accurately representing the brain. Given that this high-level semantic information is subtle, distributed, and interdependently latent in the brain structure, sMRI-based models need to capture fine-grained details and understand how they relate to the overall global structure. However, existing models are optimized by simple objectives, making features collapse into homogeneity and worsening simultaneous representation of fine-grained information and holistic semantics, causing a lack of biological plausibility and interpretation of cognition. Here, we propose MCIAT, a unified framework that combines Multi-task Collaborative pre-training and Individual-Adaptive-Tokens fine-tuning. Specifically, we first synthesize restorative learning, age prediction auxiliary learning and adversarial learning as a joint proxy task for deep semantic representation learning. Then, a mutual-attention-based token selection method is proposed to highlight discriminative features. The proposed MCIAT achieves state-of-the-art diagnosis performance on the ADHD-200 dataset compared with several sMRI-based approaches and shows superior generalization on the MCIC and OASIS datasets. Moreover, we studied 12 behavioral tasks and found significant associations between cognitive functions and MCIAT-established representations, which verifies the interpretability of our proposed framework.
15.3CRJan 4, 2022
Open Access Dataset for Electromyography based Multi-code Biometric AuthenticationAshirbad Pradhan, Jiayuan He, Ning Jiang
Recently, surface electromyogram (EMG) has been proposed as a novel biometric trait for addressing some key limitations of current biometrics, such as spoofing and liveness. The EMG signals possess a unique characteristic: they are inherently different for individuals (biometrics), and they can be customized to realize multi-length codes or passwords (for example, by performing different gestures). However, current EMG-based biometric research has two critical limitations: 1) a small subject pool, compared to other more established biometric traits, and 2) limited to single-session or single-day data sets. In this study, forearm and wrist EMG data were collected from 43 participants over three different days with long separation while they performed static hand and wrist gestures. The multi-day biometric authentication resulted in a median EER of 0.017 for the forearm setup and 0.025 for the wrist setup, comparable to well-established biometric traits suggesting consistent performance over multiple days. The presented large-sample multi-day data set and findings could facilitate further research on EMG-based biometrics and other gesture recognition-based applications.
1.2SPMay 30, 2019
Simultaneous induction of SSMVEP and SMR Using a Gaiting video stimulus: a novel hybrid brain-computer interfaceXin Zhang, Guanghua Xu, Aravind Ravi et al.
We proposed a novel visual stimulus for brain-computer interface. The stimulus is in the form gaiting sequence of a human. The hypothesis is that observing such a visual stimulus would simultaneously induce 1) steady-state motion visual evoked potential (SSMVEP) in the occipital area, similarly to an SSVEP stimulus; and 2) sensorimotor rhythm (SMR) in the primary sensorimotor area, because such action observation (AO) could activate the mirror neuron system. Canonical correlation analysis (CCA) was used to detect SSMVEP from occipital EEG, and event-related spectral perturbations (ERSP) were used to identify SMR in the EEG from the sensorimotor area. The results showed that the proposed visual gaiting stimulus-induced SSMVEP, with classification accuracies of 88.9 $\pm$ 12.0% in a four-class scenario. More importantly, it induced clear and sustained event-related desynchronization/synchronization (ERD/ERS) in the EEG from the sensorimotor area, while no ERD/ERS in the sensorimotor area could be observed when the other two SSVEP stimuli were used. Further, for participants with sufficiently clear SSMVEP pattern (classification accuracy > 85%), the ERD index values in mu-beta band induced by the proposed gaiting stimulus were statistically different from that of the other two types of stimulus. Therefore, a novel BCI based on the proposed stimulus has potential in neurorehabilitation applications because it simultaneously has the high accuracy of an SSMVEP (~90% accuracy in a four-class setup) and the ability to activate sensorimotor cortex. And such potential will be further explored in future studies.