Chenrui Xu

Jiakang Shen, Qinghui Chen, Runtong Wang et al.

Tropical cyclones (TC) are among the most destructive natural disasters, causing catastrophic damage to coastal regions through extreme winds, heavy rainfall, and storm surges. Timely monitoring of tropical cyclones is crucial for reducing loss of life and property, yet it is hindered by the computational inefficiency and high parameter counts of existing methods on resource-constrained edge devices. Current physics-guided models suffer from linear feature interactions that fail to capture high-order polynomial relationships between TC attributes, leading to inflated model sizes and hardware incompatibility. To overcome these challenges, this study introduces the Kolmogorov-Arnold Network-based Feature Interaction Framework (KAN-FIF), a lightweight multimodal architecture that integrates MLP and CNN layers with spline-parameterized KAN layers. For Maximum Sustained Wind (MSW) prediction, experiments demonstrate that the KAN-FIF framework achieves a $94.8\%$ reduction in parameters (0.99MB vs 19MB) and $68.7\%$ faster inference per sample (2.3ms vs 7.35ms) compared to baseline model Phy-CoCo, while maintaining superior accuracy with $32.5\%$ lower MAE. The offline deployment experiment of the FY-4 series meteorological satellite processor on the Qingyun-1000 development board achieved a 14.41ms per-sample inference latency with the KAN-FIF framework, demonstrating promising feasibility for operational TC monitoring and extending deployability to edge-device AI applications. The code is released at https://github.com/Jinglin-Zhang/KAN-FIF.

Zhangyang Gao, Hao Wang, Cheng Tan et al.

This study investigates the current landscape and future directions of protein foundation model research. While recent advancements have transformed protein science and engineering, the field lacks a comprehensive benchmark for fair evaluation and in-depth understanding. Since ESM-1B, numerous protein foundation models have emerged, each with unique datasets and methodologies. However, evaluations often focus on limited tasks tailored to specific models, hindering insights into broader generalization and limitations. Specifically, researchers struggle to understand the relationships between tasks, assess how well current models perform across them, and determine the criteria in developing new foundation models. To fill this gap, we present PFMBench, a comprehensive benchmark evaluating protein foundation models across 38 tasks spanning 8 key areas of protein science. Through hundreds of experiments on 17 state-of-the-art models across 38 tasks, PFMBench reveals the inherent correlations between tasks, identifies top-performing models, and provides a streamlined evaluation protocol. Code is available at \href{https://github.com/biomap-research/PFMBench}{\textcolor{blue}{GitHub}}.

Chenrui Xu, Wenjing Yan, Ying-Jun Angela Zhang

Training large-scale neural networks requires solving nonconvex optimization where the choice of optimizer fundamentally determines both convergence behavior and computational efficiency. While adaptive methods like Adam have long dominated practice, the recently proposed Muon optimizer achieves superior performance through orthogonalized momentum updates that enforce isotropic geometry with uniform singular values. However, this strict isotropy discards potentially valuable curvature information encoded in gradient spectra, motivating optimization methods that balance geometric structure with adaptivity. We introduce FISMO (Fisher-Structured Momentum-Orthogonalized) optimizer, which generalizes isotropic updates to incorporate anisotropic curvature information through Fisher information geometry. By reformulating the optimizer update as a trust-region problem constrained by a Kronecker-factored Fisher metric, FISMO achieves structured preconditioning that adapts to local loss landscape geometry while maintaining computational tractability. We establish convergence guarantees for FISMO in stochastic nonconvex settings, proving an $\mathcal{O}(1/\sqrt{T})$ rate for the expected squared gradient norm with explicit characterization of variance reduction through mini-batching. Empirical evaluation on image classification and language modeling benchmarks demonstrates that FISMO achieves superior training efficiency and final performance compared to established baselines.